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Species: Homo sapiens
Genetic Insert: aSyn
Vector Backbone Description: Vector Backbone:pET21a; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:34452994
Proper citation: RRID:Addgene_240596 Copy
Species: Mus musculus
Genetic Insert: murine Nr1d1 promoter+Venus-NLS-Pest-Reporter
Vector Backbone Description: Backbone Marker:VectorBuilder; Vector Backbone:pLenti6-puromycin; Vector Types:Lentiviral; Bacterial Resistance:Ampicillin
Comments: Insertion of SV40 Enhancer + Ori. From our analysis in U2OS cells, SV40(3) and JeT variants are superior in reporting circadian rhythms. Please visit https://doi.org/10.1101/2025.06.30.661926 for bioRxiv preprint.
Proper citation: RRID:Addgene_240115 Copy
Species: Homo sapiens
Genetic Insert: aSyn
Vector Backbone Description: Vector Backbone:pT7-7; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:40268916
Proper citation: RRID:Addgene_240599 Copy
Species: Homo sapiens
Genetic Insert: aSyn
Vector Backbone Description: Vector Backbone:pRK172; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:31295458
Proper citation: RRID:Addgene_240598 Copy
Species: Synthetic
Genetic Insert: Cas12k gRNA
Vector Backbone Description: Vector Backbone:pACRISPR; Vector Types:CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:34469724
Proper citation: RRID:Addgene_171528 Copy
Species: Mus musculus
Genetic Insert: murine Nr1d1 promoter+mScarlet-I3-NLS-Pest-Reporter
Vector Backbone Description: Backbone Marker:VectorBuilder; Vector Backbone:pLenti6-puromycin; Vector Types:Lentiviral; Bacterial Resistance:Ampicillin
Comments: Exchanged fluorophore from pL6puro-pSV40(3)-pmRevErbA-Venus-NLS-Pest. From our analysis in U2OS cells, SV40(3) and JeT variants are superior in reporting circadian rhythms. Please visit https://doi.org/10.1101/2025.06.30.661926 for bioRxiv preprint.
Proper citation: RRID:Addgene_240117 Copy
Species: Mus musculus
Genetic Insert: murine Nr1d1 promoter+mScarlet-I3-NLS-Pest-Reporter
Vector Backbone Description: Backbone Marker:VectorBuilder; Vector Backbone:pLenti6-puromycin; Vector Types:Lentiviral; Bacterial Resistance:Ampicillin
Comments: Exchanged fluorophore from pL6puro-pSV40(1)-pmRevErbA-Venus-NLS-Pest. From our analysis in U2OS cells, SV40(3) and JeT variants are superior in reporting circadian rhythms. Please visit https://doi.org/10.1101/2025.06.30.661926 for bioRxiv preprint.
Proper citation: RRID:Addgene_240116 Copy
Species: Mus musculus
Genetic Insert: murine Nr1d1 promoter+mScarlet-I3-NLS-Pest-Reporter
Vector Backbone Description: Backbone Marker:VectorBuilder; Vector Backbone:pLenti6-puromycin; Vector Types:Lentiviral; Bacterial Resistance:Ampicillin
Comments: Exchanged fluorophore from pL6puro-pSV40(4)-pmRevErbA-Venus-NLS-Pest. From our analysis in U2OS cells, SV40(3) and JeT variants are superior in reporting circadian rhythms. Please visit https://doi.org/10.1101/2025.06.30.661926 for bioRxiv preprint.
Proper citation: RRID:Addgene_240118 Copy
Vector Backbone Description: Backbone Size:5110; Vector Backbone:pSTARR-seq_human; Vector Types:Mammalian Expression, Luciferase; Bacterial Resistance:Chloramphenicol and Ampicillin
Defining Citation: PMID:32958950
Proper citation: RRID:Addgene_158028 Copy
Vector Backbone Description: Backbone Size:5110; Vector Backbone:pSTARR-seq_human; Vector Types:Mammalian Expression, Luciferase; Bacterial Resistance:Chloramphenicol and Ampicillin
Defining Citation: PMID:32958950
Proper citation: RRID:Addgene_158029 Copy
Vector Backbone Description: Backbone Size:5110; Vector Backbone:pSTARR-seq_human; Vector Types:Mammalian Expression, Luciferase; Bacterial Resistance:Chloramphenicol and Ampicillin
Defining Citation: PMID:32958950
Proper citation: RRID:Addgene_158027 Copy
Species: Saccharomyces cerevisiae
Genetic Insert: Sc FLAG-S6-RFC1
Vector Backbone Description: Vector Backbone:pRSFDuet; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Proper citation: RRID:Addgene_239472 Copy
Species: Homo sapiens
Genetic Insert: 10,843 bp of MALAT1 of genomic locus amplified from genomic DNA of Hela cells
Vector Backbone Description: Vector Backbone:pcDNA5/FRT; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:40399278
Comments: Please visit https://doi.org/10.1101/2024.09.26.615073 for bioRxiv preprint.
Proper citation: RRID:Addgene_239347 Copy
Vector Backbone Description: Vector Backbone:pBAD24; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:38106174
Comments: For compatible plasmids, please see: Addgene plasmid #159986 and #159987.
Please visit https://doi.org/10.1101/2023.12.03.569786 for bioRxiv preprint.
Proper citation: RRID:Addgene_240248 Copy
Species: Synthetic
Genetic Insert: mNeonGreen mCherry-CAAX
Vector Backbone Description: Vector Backbone:pminiTol2; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:40906841
Proper citation: RRID:Addgene_240800 Copy
Species: S. pyogenes
Genetic Insert: nCas9-D10A
Vector Backbone Description: Backbone Marker:David Liu; Vector Backbone:pCMV-PE2 (Addgene #132775); Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:40447589
Proper citation: RRID:Addgene_239383 Copy
Species: S. pyogenes, MMLV
Genetic Insert: nCas9(D10A-R221K-N394K), M-MLV-RT(ΔRNase H)
Vector Backbone Description: Backbone Marker:David Liu; Vector Backbone:pCMV-PEmax (Addgene #174820); Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:40447589
Proper citation: RRID:Addgene_239381 Copy
Species: Homo sapiens
Genetic Insert: LSAM
Vector Backbone Description: Vector Backbone:pET28b(+); Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Proper citation: RRID:Addgene_240215 Copy
Species: Homo sapiens
Genetic Insert: Tom20
Vector Backbone Description: Vector Backbone:pN1; Vector Types:Mammalian Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:40247125
Proper citation: RRID:Addgene_239412 Copy
Species: Synthetic
Genetic Insert: mScarlet3-H-KDEL
Vector Backbone Description: Vector Backbone:pN1; Vector Types:Mammalian Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:40247125
Proper citation: RRID:Addgene_239411 Copy
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