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Species: Mus musculus
Genetic Insert: pAAV hSyn iGluSnFR3 v857.GPI
Vector Backbone Description: Backbone Size:4836; Vector Backbone:pAAV hSyn; Vector Types:Mammalian Expression, Mouse Targeting, AAV, Cre/Lox, Synthetic Biology; Bacterial Resistance:Ampicillin
Defining Citation: PMID:37142767
Proper citation: RRID:Addgene_178331 Copy
Genetic Insert: jGCaMP8s-P2A-ChrimsonR-ST
Vector Backbone Description: Backbone Size:4897; Vector Backbone:pAAV; Vector Types:AAV; Bacterial Resistance:Ampicillin
Defining Citation: PMID:36858826
Comments: Subcloned from:
pAAV-hSyn-DIO-ChrimsonR-mRuby2-ST
(Plasmid #105448)
pGP-AAV-syn-jGCaMP8s-WPRE
(Plasmid #162374)
Please visit https://doi.org/10.1101/2022.09.06.506779 for bioRxiv preprint.
Proper citation: RRID:Addgene_174007 Copy
Vector Backbone Description: Vector Backbone:pLVX; Vector Types:Lentiviral, CRISPR; Bacterial Resistance:Ampicillin
Proper citation: RRID:Addgene_167904 Copy
Species: Synthetic
Genetic Insert: DREADD Gq-mCherry
Vector Backbone Description: Backbone Marker:Stratagene; Backbone Size:4605; Vector Backbone:pAAV-nEF; Vector Types:AAV; Bacterial Resistance:Ampicillin
Proper citation: RRID:Addgene_183534 Copy
Species: Homo sapiens
Genetic Insert: MYH9
Vector Backbone Description: Backbone Marker:Invitrogen; Backbone Size:5502; Vector Backbone:pcDNA3.1/nV5-DEST; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:19046415
Proper citation: RRID:Addgene_183512 Copy
Species: Homo sapiens
Genetic Insert: NRF1
Vector Backbone Description: Backbone Marker:Clontech; Backbone Size:7000; Vector Backbone:pMSCV-hyg; Vector Types:Mammalian Expression, Retroviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:20385086
Proper citation: RRID:Addgene_34708 Copy
Species: Homo sapiens
Genetic Insert: mStrawberry
Vector Backbone Description: Backbone Size:7728; Vector Backbone:pLKO.1; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:35585055
Proper citation: RRID:Addgene_158683 Copy
Vector Backbone Description: Backbone Size:9175; Vector Backbone:pX459V2.0-HypaCas9; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:36416720
Proper citation: RRID:Addgene_183872 Copy
Genetic Insert: nbMmIgG1-Tn5
Vector Backbone Description: Vector Backbone:pTXB1; Vector Types:; Bacterial Resistance:Ampicillin
Defining Citation: PMID:36536150
Proper citation: RRID:Addgene_184287 Copy
Genetic Insert: nbOcIgG-Tn5
Vector Backbone Description: Vector Backbone:pTXB1; Vector Types:; Bacterial Resistance:Ampicillin
Defining Citation: PMID:36536150
Proper citation: RRID:Addgene_184285 Copy
Genetic Insert: nbMmKappa-Tn5
Vector Backbone Description: Vector Backbone:pTXB1; Vector Types:; Bacterial Resistance:Ampicillin
Defining Citation: PMID:36536150
Proper citation: RRID:Addgene_184286 Copy
Species: Other
Genetic Insert: GPI-mEGFP
Vector Backbone Description: Vector Backbone:mEGFP-C1; Vector Types:Mammalian Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:34494547
Proper citation: RRID:Addgene_182866 Copy
Species: SARS-CoV-2 virus
Genetic Insert: SARS-CoV-2 Omicron BA.1 Spike receptor binding domain (RBD)
Vector Backbone Description: Vector Backbone:pETcon; Vector Types:Yeast Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:35762884
Proper citation: RRID:Addgene_184408 Copy
Species: Homo sapiens
Genetic Insert: HS4-TRE-cit-HS4-mch (DH)
Vector Backbone Description: Backbone Marker:Yamaguchi et al. 2011 PLoS One, doi: 10.1371/journal.pone.0017267; Vector Backbone:pSLR-test; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:35678392
Comments: Please visit https://www.biorxiv.org/content/10.1101/2021.11.04.467237v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_179432 Copy
Species: Rattus norvegicus
Genetic Insert: H2B-mIFP-T2A-rTetR-KRAB
Vector Backbone Description: Vector Backbone:pPB (PiggyBac); Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:35678392
Comments: Please visit https://www.biorxiv.org/content/10.1101/2021.11.04.467237v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_179438 Copy
Species: Homo sapiens
Genetic Insert: TRE-cit-coreHS4-mch (SC)
Vector Backbone Description: Backbone Marker:Yamaguchi et al. 2011 PLoS One, doi: 10.1371/journal.pone.0017267; Vector Backbone:pSLR-test; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:35678392
Comments: Please visit https://www.biorxiv.org/content/10.1101/2021.11.04.467237v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_179431 Copy
Genetic Insert: UPF1
Vector Backbone Description: Vector Backbone:pCI-neo; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:32017897
Comments: Depositor confirms the additional S743A mutation does not affect plasmid function.
Proper citation: RRID:Addgene_136007 Copy
Species: Homo sapiens
Genetic Insert: RAB11B, member RAS oncogene family
Vector Backbone Description: Backbone Marker:Thermo Scientific; Backbone Size:3000; Vector Backbone:pJet1.2; Vector Types:Mammalian Expression, Bacterial Expression, CRISPR, Donor for homologous based knock in; Bacterial Resistance:Ampicillin
Defining Citation: PMID:35708998
Comments: Here donor for DExogron Rab11b knock in. DExogron = DExCon (Doxycycline-mediated endogenous gene Expression Control) combined with auxin-mediated targeted protein degradation. Lentiviral delivery of AtAFBP2 and TetOn 3G is also required for this to work.
https://figshare.com/projects/DExCon_DExogron_LUXon_on-demand_expression_control_of_endogenous_genes_reveals_differential_dynamics_of_Rab11_family_members/118281.
Please visit https://www.biorxiv.org/content/10.1101/2021.12.03.471086v1.full for bioRxiv preprint.
Proper citation: RRID:Addgene_179904 Copy
Species: Homo sapiens
Genetic Insert: RAB11A, member RAS oncogene family
Vector Backbone Description: Backbone Marker:Thermo Scientific; Backbone Size:3000; Vector Backbone:pJet1.2; Vector Types:Mammalian Expression, Bacterial Expression, CRISPR, Donor for homologous based knock in; Bacterial Resistance:Ampicillin
Defining Citation: PMID:35708998
Comments: Here donor for DExCon Rab11a knock in. DExCon = Doxycycline-mediated endogenous gene Expression Control. Lentiviral delivery of TetOn 3G is also required for this to work.
AntiGFPnanobody can be used to manipulate with endogenously expressed protein.
https://figshare.com/projects/DExCon_DExogron_LUXon_on-demand_expression_control_of_endogenous_genes_reveals_differential_dynamics_of_Rab11_family_members/118281.
Please visit https://www.biorxiv.org/content/10.1101/2021.12.03.471086v1.full for bioRxiv preprint.
Proper citation: RRID:Addgene_179902 Copy
Species: Methanosarcina mazei
Genetic Insert: codon-optimized Y306A/Y384F (AF) double mutant of Methanosarcina mazei-derived pyrrolysine (Pyl) tRNA synthetase
Vector Backbone Description: Vector Backbone:pcDNA3.1(+); Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:35031604
Proper citation: RRID:Addgene_182287 Copy
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