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Vector Backbone Description: Vector Backbone:pKD4; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin
Comments: This plasmid is pInt_attP1_kanR with a Library cloning site (LCS) flanked by transcriptional terminators for reporters / constructs. FRT sites excise backbone, not payload. Please visit https://doi.org/10.1101/2023.06.28.546561 for bioRxiv preprint.\ Depositing lab uses BW25141 strain for growth (https://cgsc.biology.yale.edu/Strain.php?ID=64690).
Proper citation: RRID:Addgene_205300 Copy
Species: Synthetic
Genetic Insert: PhiC31 Target
Vector Backbone Description: Backbone Marker:Thermo Fisher Scientific; Backbone Size:3512; Vector Backbone:pCR-BluntII-TOPO; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin
Defining Citation: PMID:37012288
Proper citation: RRID:Addgene_195890 Copy
Species: Synthetic
Genetic Insert: AAV-BI49 Cap
Vector Backbone Description: Vector Backbone:iCAP-KanR; Vector Types:Mammalian Expression, AAV; Bacterial Resistance:Kanamycin
Defining Citation: PMID:37467291
Proper citation: RRID:Addgene_203534 Copy
Species: Aequorea victoria
Genetic Insert: mid.8
Vector Backbone Description: Backbone Size:5209; Vector Backbone:pET28; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:37210560
Comments: Design created by the htFuncLib algorithm
Proper citation: RRID:Addgene_191902 Copy
Species: Renilla reniformis
Genetic Insert: B3RT-Act2-B3RT::FRT-OCS-FRT::Rluc
Vector Backbone Description: Backbone Marker:Sylvestre Marillonnet; Vector Backbone:pAGM4673; Vector Types:Plant Expression, Synthetic Biology; Bacterial Resistance:Kanamycin
Defining Citation: PMID:35788565
Comments: Other genes: TCTP1::Fluc, TCTP1::B3o
Proper citation: RRID:Addgene_192409 Copy
Vector Backbone Description: Vector Backbone:pKD4; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin
Comments: Nonreplicating ORBIT integrating plasmid with WT attP (P1) sequence. Replicates in pir+ strains for cloning. FRT sites can be used to excise most of the backbone. Kanamycin resistant. Please visit https://doi.org/10.1101/2023.06.28.546561 for bioRxiv preprint. Depositing lab uses BW25141 strain for growth (https://cgsc.biology.yale.edu/Strain.php?ID=64690).
Proper citation: RRID:Addgene_205294 Copy
Species: Synthetic
Genetic Insert: ilvA-relE_RBS3_CB3
Vector Backbone Description: Vector Backbone:pJUMP24-T24; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin
Defining Citation: PMID:37260076
Proper citation: RRID:Addgene_201534 Copy
Species: Synthetic
Genetic Insert: Empty Tp901 Target
Vector Backbone Description: Backbone Marker:Thermo Fisher Scientific; Backbone Size:3512; Vector Backbone:pCR-BluntII-TOPO; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin
Defining Citation: PMID:37012288
Proper citation: RRID:Addgene_195885 Copy
Species: Synthetic
Genetic Insert: PgpdA:ergA:TamdS
Vector Backbone Description: Vector Backbone:pDGB3alpha2; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin
Defining Citation: PMID:37609115
Proper citation: RRID:Addgene_203622 Copy
Species: Aequorea victoria
Genetic Insert: bleach.2
Vector Backbone Description: Backbone Size:5209; Vector Backbone:pET28; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:37210560
Comments: Design created by the htFuncLib algorithm
Proper citation: RRID:Addgene_191878 Copy
Species: Synthetic
Genetic Insert: R1:G1abc.3:mPAF:Luc:TtrpC
Vector Backbone Description: Vector Backbone:pDGB3alpha2; Vector Types:Synthetic Biology; Bacterial Resistance:Kanamycin
Defining Citation: PMID:37609115
Proper citation: RRID:Addgene_203633 Copy
Species: Homo sapiens
Genetic Insert: ERAP1
Vector Backbone Description: Backbone Marker:origene; Vector Backbone:pCMV6-Entry (PS100001); Vector Types:; Bacterial Resistance:Kanamycin
Defining Citation: PMID:36465279
Comments: https://www.origene.com/catalog/cdna-clones/expression-plasmids/rc205249/arts1-erap1-nm_001040458-human-tagged-orf-clone
Proper citation: RRID:Addgene_206142 Copy
Species: Homo sapiens
Genetic Insert: TWNK
Vector Backbone Description: Vector Backbone:pBR322; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:36528058
Proper citation: RRID:Addgene_205056 Copy
Species: Acidovorax avenae subsp. Avenae
Genetic Insert: cytochrome P450
Vector Backbone Description: Vector Backbone:pCYP; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Proper citation: RRID:Addgene_212836 Copy
Species: Danio rerio
Genetic Insert: kcnk4b
Vector Backbone Description: Backbone Size:2605; Vector Backbone:pENTR-D-TOP; Vector Types:Cloning; Bacterial Resistance:Kanamycin
Defining Citation: PMID:38270285
Proper citation: RRID:Addgene_213123 Copy
Species: E.coli (K12)
Genetic Insert: OmpX (24-171)
Vector Backbone Description: Vector Backbone:pET28b; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:31374213
Comments: inclusion bodies
Proper citation: RRID:Addgene_213136 Copy
Species: E.coli
Genetic Insert: SurA (21-428)
Vector Backbone Description: Vector Backbone:pET28b; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:37704632
Comments: 6xHis-tag -- TEV cleavage site -- SurA
Proper citation: RRID:Addgene_213138 Copy
Species: Sinorhizobium fredii
Genetic Insert: cytochrome P450
Vector Backbone Description: Vector Backbone:pCYP; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Proper citation: RRID:Addgene_212841 Copy
Species: Homo sapiens
Genetic Insert: Parkin
Vector Backbone Description: Backbone Size:3954; Vector Backbone:Addgene #23956; Vector Types:Mammalian Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:37851575
Comments: Backbone source used an M1L substitution in Parkin, corrected here.
Proper citation: RRID:Addgene_213544 Copy
Species: Homo sapiens
Genetic Insert: Parkin
Vector Backbone Description: Backbone Size:3954; Vector Backbone:Addgene #23956; Vector Types:Mammalian Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:37851575
Proper citation: RRID:Addgene_213546 Copy
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