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Plasmids are provided by Addgene and DGRC.

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  • Organism:danio rerio (facet)


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Plasmid Name Proper Citation Insert Name Organism Bacterial Resistance Defining Citation Comments Vector Backbone Description Relevant Mutation Record Last Update Mentions Count
pT7-EGFP-C1-tubcDNA_D
 
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RRID:Addgene_146140 tubcDNA Danio rerio Kanamycin PMID:19414594 Plasmids from this collection were made available to the research community and donated after the lab closed. Please note that the sequence provided by the depositing laboratory may be theoretical/predicted or based on Sanger sequencing results. There may be discrepancies between sequencing results obtained by Addgene and the depositor sequence. If an Addgene verified sequence is not available, please contact [email protected] before placing your order to request that our lab fully sequence the plasmid. Vector Backbone:Unknown; Vector Types:Mammalian Expression; Bacterial Resistance:Kanamycin 5 silent and one non silent mutation E442K compared to the sequence given by NCBI: NM_198809.2 2026-08-15 01:25:30 0
pCRII-TOPO-DrSmg5_F
 
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RRID:Addgene_146278 DrSmg5 Danio rerio Ampicillin PMID:19414594 Sequence based on parts of the sequence given by NCBI: NM_001024923.1 Plasmids from this collection were made available to the research community and donated after the lab closed. Please note that the sequence provided by the depositing laboratory may be theoretical/predicted or based on Sanger sequencing results. There may be discrepancies between sequencing results obtained by Addgene and the depositor sequence. If an Addgene verified sequence is not available, please contact [email protected] before placing your order to request that our lab fully sequence the plasmid. Vector Backbone:Unknown; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:25:31 0
pCRII-TOPO-DrSmg1_F
 
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RRID:Addgene_146277 DrSmg1 Danio rerio Ampicillin PMID:19414594 Sequence based on parts of the sequence given by NCBI: NC_007114.5 Plasmids from this collection were made available to the research community and donated after the lab closed. Please note that the sequence provided by the depositing laboratory may be theoretical/predicted or based on Sanger sequencing results. There may be discrepancies between sequencing results obtained by Addgene and the depositor sequence. If an Addgene verified sequence is not available, please contact [email protected] before placing your order to request that our lab fully sequence the plasmid. Vector Backbone:Unknown; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:25:31 0
pCRII-TOPO-DrUPF3a_F
 
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RRID:Addgene_146283 DrUPF3a Danio rerio Ampicillin PMID:19414594 Sequence based on parts of the sequence given by NCBI: BC095761.1 (211.....445) Plasmids from this collection were made available to the research community and donated after the lab closed. Please note that the sequence provided by the depositing laboratory may be theoretical/predicted or based on Sanger sequencing results. There may be discrepancies between sequencing results obtained by Addgene and the depositor sequence. If an Addgene verified sequence is not available, please contact [email protected] before placing your order to request that our lab fully sequence the plasmid. Vector Backbone:Unknown; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:25:31 0
pCRII-TOPO-DrUPF1_F
 
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RRID:Addgene_146281 DrUPF1 Danio rerio Ampicillin PMID:19414594 Sequence based on parts of the sequence given by NCBI: NM_213474.1 (119....800) Plasmids from this collection were made available to the research community and donated after the lab closed. Please note that the sequence provided by the depositing laboratory may be theoretical/predicted or based on Sanger sequencing results. There may be discrepancies between sequencing results obtained by Addgene and the depositor sequence. If an Addgene verified sequence is not available, please contact [email protected] before placing your order to request that our lab fully sequence the plasmid. Vector Backbone:Unknown; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:25:31 0
pcDNA3-mTFP1-Rab5c
 
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RRID:Addgene_244031 mTFP1-Rab5c Danio rerio Ampicillin PMID:30237292 Vector Backbone:pcDNA3; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:34:20 0
pTol1-U6abc_erbb2_cmlc2-nmKate
 
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RRID:Addgene_238409 nuclear mKate/3 gRNAs targeting tnnt2a Danio rerio Ampicillin PMID:40132543 Vector Backbone:Tol1-based backbone; Vector Types:; Bacterial Resistance:Ampicillin 2026-08-15 01:34:27 0
pTol1-U6abc_tnnt2a_cmlc2-nmKate
 
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RRID:Addgene_238309 nuclear mKate/3 gRNAs targeting tnnt2a Danio rerio Ampicillin PMID:40132543 Vector Backbone:Tol1-based backbone; Vector Types:; Bacterial Resistance:Ampicillin 2026-08-15 01:34:27 0
pTol1-U6abc_ect2_cmlc2-nmKate
 
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RRID:Addgene_238410 nuclear mKate/3 gRNAs targeting ect2 Danio rerio Ampicillin PMID:40132543 Vector Backbone:Tol1-based backbone; Vector Types:; Bacterial Resistance:Ampicillin 2026-08-15 01:34:27 0
fabp10a:lox2272-loxp-nls-mTagBFP2-stop-lox2272-H2B-mGL-stop-loxp-mCherry-NTR2.0; cmlc2:EGFP
 
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RRID:Addgene_230075 lox2272-loxp-nls-mTagBFP2-stop-lox2272-H2B-mGL-stop-loxp-mCherry-NTR2.0 Danio rerio Ampicillin PMID:41912583 Please visit https://doi.org/10.1101/2025.05.23.655316 for bioRxiv preprint. Vector Backbone:pUC57; Vector Types:Cre/Lox, Zebrafish Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:32:57 0
Nanog-mNG-KS
 
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RRID:Addgene_238298 Nanog-mNG-KS Danio rerio Ampicillin PMID:40468084 Vector Backbone:pCS2+; Vector Types:Zebrafish expression; Bacterial Resistance:Ampicillin 2026-08-15 01:33:01 0
Nanog-mNG-KS-FtoG
 
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RRID:Addgene_238297 Nanog-mNG-KS-FtoG Danio rerio Ampicillin PMID:40468084 Vector Backbone:pCS2+; Vector Types:Zebrafish expression; Bacterial Resistance:Ampicillin 2026-08-15 01:33:01 0
apoBb.1-Dendra2
 
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RRID:Addgene_218180 apoBb.1-Dendra2 Danio rerio Kanamycin PMID:40836916 On this plasmid encoded is the C-terminal sequence of apoBb.1 (zebrafish ortholog of APOB) spanning the region of the TALEN homology region. followed by an HA-tag, then by a 4-Gly linker, and then the Dendra2 sequence with a STOP at the end, followed by the UTR of apoBb1 which servers as TALEN homology region. Backbone Marker:Genewiz; Backbone Size:2626; Vector Backbone:pUC57-Kan; Vector Types:TALEN; Bacterial Resistance:Kanamycin inserts HA-Dendra2 sequence at C-terminus of apoBb.1 2026-08-15 01:33:48 0
pCS2-Opto-Acvr1ba-P2A-Acvr2ba
 
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RRID:Addgene_232640 Acvr1ba + VfLOV domain and Acvr2ba + VfLOV domain Danio rerio Ampicillin PMID:40568079 Based on the constructs first developed by Sako et al. 2016 (Cell Reports, https://doi.org/10.1016/j.celrep.2016.06.036). Please visit https://doi.org/10.1101/2025.04.17.649426 for bioRxiv preprint. Backbone Size:4095; Vector Backbone:pCS2+; Vector Types:; Bacterial Resistance:Ampicillin 2026-08-15 01:32:33 0
pCS2-Opto-zFGFR1a
 
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RRID:Addgene_232639 zFGFR1a kinase domain + VfLOV domain Danio rerio Ampicillin PMID:40568079 Based on the chassis first developed by Sako et al. 2016 (Cell Reports, https://doi.org/10.1016/j.celrep.2016.06.036), and later used in Rogers et al. 2020 (eLife, https://doi.org/10.7554/elife.58641). Please visit https://doi.org/10.1101/2025.04.17.649426 for bioRxiv preprint. Backbone Size:4095; Vector Backbone:pCS2+; Vector Types:; Bacterial Resistance:Ampicillin 2026-08-15 01:32:37 0
pTol1-EcoRI-BmtI-BamHI-cmlc2-nmKate
 
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RRID:Addgene_238372 nmKate Danio rerio Ampicillin PMID:40132543 Vector Backbone:Tol1-based backbone; Vector Types:; Bacterial Resistance:Ampicillin 2026-08-15 01:32:53 0
pTol1-Spe-KpnI-ubb-nmKate
 
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RRID:Addgene_238373 nmKate Danio rerio Ampicillin PMID:40132543 Vector Backbone:Tol1-based backbone; Vector Types:; Bacterial Resistance:Ampicillin 2026-08-15 01:32:53 0
pCS2+ Zf nhsl1b-mNeongreen
 
Resource Report
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RRID:Addgene_233883 nhsl1b Danio rerio Ampicillin PMID:40021913 Please visit https://doi.org/10.1101/2023.01.28.526006 for bioRxiv preprint. Backbone Size:4095; Vector Backbone:pCS2+; Vector Types:Mammalian Expression, In vitro synthesis of mRNA; Bacterial Resistance:Ampicillin 2026-08-15 01:33:27 0
pCS2+her3WT-P2A-sfGFP
 
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RRID:Addgene_240545 her3 Danio rerio Ampicillin PMID:36696714 Backbone Marker:Jason Berman (Addgene Plasmid #74668); Backbone Size:4915; Vector Backbone:pCS2+MCS-P2A-sfGFP; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:34:14 0
p5E itga11a-cFos
 
Resource Report
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RRID:Addgene_240524 integrin α11a - 3.2kb promoter Danio rerio Kanamycin PMID:41123438 Backbone Marker:Invitrogen; Backbone Size:2800; Vector Backbone:p5E-MCS; Vector Types:Unspecified; Bacterial Resistance:Kanamycin 2026-08-15 01:34:14 0

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