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Species: Synthetic
Genetic Insert: TALEsp1
Vector Backbone Description: Vector Backbone:unknown; Vector Types:Bacterial Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:29553576
Proper citation: RRID:Addgene_109238 Copy
Species: Synthetic
Genetic Insert: TALEsp2
Vector Backbone Description: Vector Backbone:unknown; Vector Types:Bacterial Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:29553576
Proper citation: RRID:Addgene_109239 Copy
Species: Other
Genetic Insert: zCas9
Vector Backbone Description: Vector Backbone:pYPQ167; Vector Types:Plant Expression, CRISPR, Gateway compatible zCas9 entry clone; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:29972722
Comments: pEGG-3_FLAG-NLS-zCas9-NLS cassette was originally from pHEE401E (Addgene plasmid#71287)
Proper citation: RRID:Addgene_109327 Copy
Species: Other
Genetic Insert: zCas9
Vector Backbone Description: Vector Backbone:pYPQ165; Vector Types:Plant Expression, CRISPR, Gateway compatible zCas9 entry clone; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:29972722
Comments: 3_FLAG-NLS-zCas9-NLS cassette was originally from pHEE401E (Addgene plasmid#71287)
Proper citation: RRID:Addgene_109328 Copy
Genetic Insert: N-29-1 split N-terminal T7 RNAP variant-linker-ZA expression plasmid
Vector Backbone Description: Vector Backbone:custom; Vector Types:Synthetic Biology; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:28192413
Proper citation: RRID:Addgene_118085 Copy
Genetic Insert: N-29-1 split N-terminal T7 RNAP variant-GGSGSGSS-FRB expression plasmid
Vector Backbone Description: Vector Backbone:custom; Vector Types:Synthetic Biology; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:28192413
Proper citation: RRID:Addgene_118087 Copy
Vector Backbone Description: Vector Backbone:pKFSS1_2; Vector Types:Bacterial Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:30315081
Comments: The use of Spectinomycin is recommended for propagation in E. coli and Streptomycin is recommended for propagation in B. burgdorferi. Please visit https://www.biorxiv.org/content/early/2018/09/21/363390 for bioRxiv preprint.
Proper citation: RRID:Addgene_118227 Copy
Species: Synthetic
Genetic Insert: dCasRx-RBM38
Vector Backbone Description: Backbone Marker:Invitrogen; Vector Backbone:pCR8/GW/TOPO; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:32532987
Comments: More info at http://CasFx.org . Please visit https://www.biorxiv.org/content/early/2018/09/30/431064 for bioRxiv preprint.
Proper citation: RRID:Addgene_118662 Copy
Species: Synthetic
Genetic Insert: DR-RG6-SA-DR
Vector Backbone Description: Backbone Marker:Invitrogen; Vector Backbone:pCR8/GW/TOPO; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:32532987
Comments: More info at http://CasFx.org . Please visit https://www.biorxiv.org/content/early/2018/09/30/431064 for bioRxiv preprint.
Proper citation: RRID:Addgene_118654 Copy
Species: Synthetic
Genetic Insert: gSMN2-EX
Vector Backbone Description: Backbone Marker:Invitrogen; Vector Backbone:pCR8/GW/TOPO; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:32532987
Comments: More info at http://CasFx.org . Please visit https://www.biorxiv.org/content/early/2018/09/30/431064 for bioRxiv preprint.
Proper citation: RRID:Addgene_118651 Copy
Species: Synthetic
Genetic Insert: RBFOX1N-dCasRx-C
Vector Backbone Description: Backbone Marker:Invitrogen; Vector Backbone:pCR8/GW/TOPO; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:32532987
Comments: More info at http://CasFx.org . Please visit https://www.biorxiv.org/content/early/2018/09/30/431064 for bioRxiv preprint.
Proper citation: RRID:Addgene_118657 Copy
Species: Synthetic
Genetic Insert: gSMN2-DN4
Vector Backbone Description: Backbone Marker:Invitrogen; Vector Backbone:pCR8/GW/TOPO; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:32532987
Comments: More info at http://CasFx.org . Please visit https://www.biorxiv.org/content/early/2018/09/30/431064 for bioRxiv preprint.
Proper citation: RRID:Addgene_118649 Copy
Species: Synthetic
Genetic Insert: gSMN2-DN3
Vector Backbone Description: Backbone Marker:Invitrogen; Vector Backbone:pCR8/GW/TOPO; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:32532987
Comments: More info at http://CasFx.org . Please visit https://www.biorxiv.org/content/early/2018/09/30/431064 for bioRxiv preprint.
Proper citation: RRID:Addgene_118648 Copy
Species: Arabidopsis thaliana
Genetic Insert: AT3G07200
Vector Backbone Description: Vector Backbone:pER8 cHA; Vector Types:Plant Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:28400782
Comments: 28 C in GV3101 (pMP90) strain
Our work is based on genomic approaches in Arabidopsis thaliana and groups of genes are presented in all of the following publications:
Pavicic Mirko (2019). Multifaceted roles of RING-type ubiquitin E3 ligases: reverse phenomic approaches. http://urn.fi/URN:ISBN:978-951-51-5483-5
Pavicic M., Mouhu K., Wang F., Bilicka M., Chovancek E., & Himanen K. (2017). Genomic and phenomic screens for flower related RING type ubiquitin E3 ligases in Arabidopsis. Frontiers in Plant Science. doi.org/10.3389/fpls.2017.00416
Pavicic M., Wang F., Mouhu K., Himanen K. (2019). High throughput in vitro seed germination screen identified new ABA responsive RING-type ubiquitin E3 ligases in Arabidopsis thaliana. Plant Cell Tissue and Organ Culture. https://link.springer.com/article/10.1007/s11240-019-01700-9
Proper citation: RRID:Addgene_118689 Copy
Species: Arabidopsis thaliana
Genetic Insert: XERICO
Vector Backbone Description: Vector Backbone:pER8 cHA; Vector Types:Plant Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:28400782
Comments: 28 C in GV3101 (pMP90) strain
Our work is based on genomic approaches in Arabidopsis thaliana and groups of genes are presented in all of the following publications:
Pavicic Mirko (2019). Multifaceted roles of RING-type ubiquitin E3 ligases: reverse phenomic approaches. http://urn.fi/URN:ISBN:978-951-51-5483-5
Pavicic M., Mouhu K., Wang F., Bilicka M., Chovancek E., & Himanen K. (2017). Genomic and phenomic screens for flower related RING type ubiquitin E3 ligases in Arabidopsis. Frontiers in Plant Science. doi.org/10.3389/fpls.2017.00416
Pavicic M., Wang F., Mouhu K., Himanen K. (2019). High throughput in vitro seed germination screen identified new ABA responsive RING-type ubiquitin E3 ligases in Arabidopsis thaliana. Plant Cell Tissue and Organ Culture. https://link.springer.com/article/10.1007/s11240-019-01700-9
Proper citation: RRID:Addgene_118690 Copy
Species: Arabidopsis thaliana
Genetic Insert: AT3G07200
Vector Backbone Description: Vector Backbone:pBA cHA; Vector Types:Plant Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:28400782
Comments: 28 C in GV3101 (pMP90) strain
Our work is based on genomic approaches in Arabidopsis thaliana and groups of genes are presented in all of the following publications:
Pavicic Mirko (2019). Multifaceted roles of RING-type ubiquitin E3 ligases: reverse phenomic approaches. http://urn.fi/URN:ISBN:978-951-51-5483-5
Pavicic M., Mouhu K., Wang F., Bilicka M., Chovancek E., & Himanen K. (2017). Genomic and phenomic screens for flower related RING type ubiquitin E3 ligases in Arabidopsis. Frontiers in Plant Science. doi.org/10.3389/fpls.2017.00416
Pavicic M., Wang F., Mouhu K., Himanen K. (2019). High throughput in vitro seed germination screen identified new ABA responsive RING-type ubiquitin E3 ligases in Arabidopsis thaliana. Plant Cell Tissue and Organ Culture. https://link.springer.com/article/10.1007/s11240-019-01700-9
Proper citation: RRID:Addgene_118665 Copy
Species: Homo sapiens
Genetic Insert: NRF2
Vector Backbone Description: Vector Backbone:pDNR223; Vector Types:Mammalian Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:27368101
Proper citation: RRID:Addgene_118708 Copy
Species: Arabidopsis thaliana
Genetic Insert: BPC4
Vector Backbone Description: Vector Backbone:pBA cMYC; Vector Types:Plant Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:28400782
Comments: 28 C in GV3101 (pMP90) strain
Our work is based on genomic approaches in Arabidopsis thaliana and groups of genes are presented in all of the following publications:
Pavicic Mirko (2019). Multifaceted roles of RING-type ubiquitin E3 ligases: reverse phenomic approaches. http://urn.fi/URN:ISBN:978-951-51-5483-5
Pavicic M., Mouhu K., Wang F., Bilicka M., Chovancek E., & Himanen K. (2017). Genomic and phenomic screens for flower related RING type ubiquitin E3 ligases in Arabidopsis. Frontiers in Plant Science. doi.org/10.3389/fpls.2017.00416
Pavicic M., Wang F., Mouhu K., Himanen K. (2019). High throughput in vitro seed germination screen identified new ABA responsive RING-type ubiquitin E3 ligases in Arabidopsis thaliana. Plant Cell Tissue and Organ Culture. https://link.springer.com/article/10.1007/s11240-019-01700-9
Proper citation: RRID:Addgene_118668 Copy
Species: Homo sapiens
Genetic Insert: SLC7A11
Vector Backbone Description: Vector Backbone:pDNR223; Vector Types:Mammalian Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:27368101
Comments: pDONR223 SLC7A11 insensitive to hairpin TRCN0000288926 (target sequence: CCCTGGAGTTATGCAGCTAAT). Mutated cDNA sequence (GCCCGGCGTGATGCAATTGAT) was confirmed by DNA sequencing,
Proper citation: RRID:Addgene_118701 Copy
Species: Synthetic
Genetic Insert: J23102MH
Vector Backbone Description: Backbone Size:2247; Vector Backbone:PICH41295; Vector Types:Synthetic Biology; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:30819783
Comments: Please visit https://www.biorxiv.org/content/10.1101/426700v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_119577 Copy
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