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Species: Arabidopsis thaliana
Genetic Insert: BPC4
Vector Backbone Description: Vector Backbone:pDONR 221; Vector Types:Other; Bacterial Resistance:Kanamycin
Defining Citation: PMID:28400782
Comments: Our work is based on genomic approaches in Arabidopsis thaliana and groups of genes are presented in all of the following publications:
Pavicic Mirko (2019). Multifaceted roles of RING-type ubiquitin E3 ligases: reverse phenomic approaches. http://urn.fi/URN:ISBN:978-951-51-5483-5
Pavicic M., Mouhu K., Wang F., Bilicka M., Chovancek E., & Himanen K. (2017). Genomic and phenomic screens for flower related RING type ubiquitin E3 ligases in Arabidopsis. Frontiers in Plant Science. doi.org/10.3389/fpls.2017.00416
Pavicic M., Wang F., Mouhu K., Himanen K. (2019). High throughput in vitro seed germination screen identified new ABA responsive RING-type ubiquitin E3 ligases in Arabidopsis thaliana. Plant Cell Tissue and Organ Culture. https://link.springer.com/article/10.1007/s11240-019-01700-9
Proper citation: RRID:Addgene_118680 Copy
Species: Arabidopsis thaliana
Genetic Insert: AT3G07200
Vector Backbone Description: Vector Backbone:pBA cHA; Vector Types:Plant Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:28400782
Comments: 28 C in GV3101 (pMP90) strain
Our work is based on genomic approaches in Arabidopsis thaliana and groups of genes are presented in all of the following publications:
Pavicic Mirko (2019). Multifaceted roles of RING-type ubiquitin E3 ligases: reverse phenomic approaches. http://urn.fi/URN:ISBN:978-951-51-5483-5
Pavicic M., Mouhu K., Wang F., Bilicka M., Chovancek E., & Himanen K. (2017). Genomic and phenomic screens for flower related RING type ubiquitin E3 ligases in Arabidopsis. Frontiers in Plant Science. doi.org/10.3389/fpls.2017.00416
Pavicic M., Wang F., Mouhu K., Himanen K. (2019). High throughput in vitro seed germination screen identified new ABA responsive RING-type ubiquitin E3 ligases in Arabidopsis thaliana. Plant Cell Tissue and Organ Culture. https://link.springer.com/article/10.1007/s11240-019-01700-9
Proper citation: RRID:Addgene_118665 Copy
Species: Arabidopsis thaliana
Genetic Insert: BPC4
Vector Backbone Description: Vector Backbone:pBA cMYC; Vector Types:Plant Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:28400782
Comments: 28 C in GV3101 (pMP90) strain
Our work is based on genomic approaches in Arabidopsis thaliana and groups of genes are presented in all of the following publications:
Pavicic Mirko (2019). Multifaceted roles of RING-type ubiquitin E3 ligases: reverse phenomic approaches. http://urn.fi/URN:ISBN:978-951-51-5483-5
Pavicic M., Mouhu K., Wang F., Bilicka M., Chovancek E., & Himanen K. (2017). Genomic and phenomic screens for flower related RING type ubiquitin E3 ligases in Arabidopsis. Frontiers in Plant Science. doi.org/10.3389/fpls.2017.00416
Pavicic M., Wang F., Mouhu K., Himanen K. (2019). High throughput in vitro seed germination screen identified new ABA responsive RING-type ubiquitin E3 ligases in Arabidopsis thaliana. Plant Cell Tissue and Organ Culture. https://link.springer.com/article/10.1007/s11240-019-01700-9
Proper citation: RRID:Addgene_118668 Copy
Species: Arabidopsis thaliana
Genetic Insert: PHL2
Vector Backbone Description: Vector Backbone:pDEST 527; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:28400782
Comments: Our work is based on genomic approaches in Arabidopsis thaliana and groups of genes are presented in all of the following publications:
Pavicic Mirko (2019). Multifaceted roles of RING-type ubiquitin E3 ligases: reverse phenomic approaches. http://urn.fi/URN:ISBN:978-951-51-5483-5
Pavicic M., Mouhu K., Wang F., Bilicka M., Chovancek E., & Himanen K. (2017). Genomic and phenomic screens for flower related RING type ubiquitin E3 ligases in Arabidopsis. Frontiers in Plant Science. doi.org/10.3389/fpls.2017.00416
Pavicic M., Wang F., Mouhu K., Himanen K. (2019). High throughput in vitro seed germination screen identified new ABA responsive RING-type ubiquitin E3 ligases in Arabidopsis thaliana. Plant Cell Tissue and Organ Culture. https://link.springer.com/article/10.1007/s11240-019-01700-9
Proper citation: RRID:Addgene_118670 Copy
Species: Arabidopsis thaliana
Genetic Insert: Cas13a
Vector Backbone Description: Vector Backbone:PUC19MinusMCS; Vector Types:Plant Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:29301551
Proper citation: RRID:Addgene_118963 Copy
Species: Arabidopsis thaliana
Genetic Insert: SOMA Sensor for Arabidopsis MAPK activity with Nuclear Localization Signal
Vector Backbone Description: Vector Backbone:pCAMBIA-1300; Vector Types:Plant Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:30444549
Comments: The Eevee Linker present in this plasmid was invented by Prof. Michiyuki Matsuda at Kyoto University. The Eevee Linker has been patented by Kyoto University. The plasmid backbone used to produce the SOMA sensor was a kind gift of Michiyuki Matsuda and Kazuhiro Aoki. Please note there are some sequence discrepancies between the Addgene quality control sequence and the author-supplied Genbank sequence. The authors have noted that the discrepancies do NOT affect plasmid function.
Proper citation: RRID:Addgene_118937 Copy
Species: Arabidopsis thaliana
Genetic Insert: SOMA FRET sensor for measuring MAPK activity in Arabidopsis thaliana with T679A Mutation
Vector Backbone Description: Vector Backbone:pET-32(a)+; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:30444549
Comments: The Eevee Linker present in this plasmid was invented by Prof. Michiyuki Matsuda at Kyoto University. The Eevee Linker has been patented by Kyoto University. The plasmid backbone used to produce the SOMA sensor was a kind gift of Michiyuki Matsuda and Kazuhiro Aoki. Please note there are some sequence discrepancies between the Addgene quality control sequence and the author-supplied Genbank sequence. The authors have noted that the discrepancies do NOT affect plasmid function.
Proper citation: RRID:Addgene_118936 Copy
Species: Arabidopsis thaliana
Genetic Insert: SOMA Sensor for Arabidopsis MAPK activity with T679A Mutation and Nuclear Localization Signal
Vector Backbone Description: Vector Backbone:pCAMBIA-1300; Vector Types:Plant Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:30444549
Comments: The Eevee Linker present in this plasmid was invented by Prof. Michiyuki Matsuda at Kyoto University. The Eevee Linker has been patented by Kyoto University. The plasmid backbone used to produce the SOMA sensor was a kind gift of Michiyuki Matsuda and Kazuhiro Aoki. Please note there are some sequence discrepancies between the Addgene quality control sequence and the author-supplied Genbank sequence. The authors have noted that the discrepancies do NOT affect plasmid function.
Proper citation: RRID:Addgene_118938 Copy
Species: Arabidopsis thaliana
Genetic Insert: SOMA FRET sensor for measuring MAPK activity in Arabidopsis thaliana
Vector Backbone Description: Vector Backbone:pET-32(a)+; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:30444549
Comments: The Eevee Linker present in this plasmid was invented by Prof. Michiyuki Matsuda at Kyoto University. The Eevee Linker has been patented by Kyoto University. The plasmid backbone used to produce the SOMA sensor was a kind gift of Michiyuki Matsuda and Kazuhiro Aoki. Please note there are some sequence discrepancies between the Addgene quality control sequence and the author-supplied Genbank sequence. The authors have noted that the discrepancies do NOT affect plasmid function.
Proper citation: RRID:Addgene_118935 Copy
Species: Arabidopsis thaliana
Genetic Insert: CUC1
Vector Backbone Description: Backbone Size:5000; Vector Backbone:pGreenII0129; Vector Types:plant transformation via Agrobacterium; Bacterial Resistance:Kanamycin
Defining Citation: PMID:15202996
Comments: See "sequence" for full insert sequence. See article for cloning details.
Proper citation: RRID:Addgene_12066 Copy
Species: Arabidopsis thaliana
Genetic Insert: CUC1 mutant
Vector Backbone Description: Backbone Marker:Stratagene; Backbone Size:3000; Vector Backbone:pBluescript II SK+; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:15202996
Comments: The CUC1 plasmid (addgene # 12064) was used as a starting material. The sequence of the primer pair used for CUC1 mutagenesis is 5mCUC1 forward 5'-CCGATCATCAATACCTTTGCGACGGAGCATGTTTCATGTTTTT CAAATAACTCTGCTGCTCATACCG-3' and 5mCUC1 reverse 5'-CGGTATGAGCAGCAGAGTTATTTGAAAAACATGAAACATGCTCCGTCGCAAAGGTATTGATGATCGG-3'. See "sequence" for the full insert sequence. See article for cloning details.
Proper citation: RRID:Addgene_12065 Copy
Species: Arabidopsis thaliana
Genetic Insert: ARF17
Vector Backbone Description: Backbone Size:5000; Vector Backbone:pGreenII0229; Vector Types:Plant Expression, plant transformation via Agrobacterium; Bacterial Resistance:Kanamycin
Defining Citation: PMID:15829600
Comments: See "sequence" for full insert sequence. See article for cloning details.
Proper citation: RRID:Addgene_12070 Copy
Species: Arabidopsis thaliana
Genetic Insert: 5mARF17
Vector Backbone Description: Backbone Marker:(pLBR19 is derived from pUC19, but contains the CaMV 35S promote; Backbone Size:5500; Vector Backbone:pLBR19; Vector Types:Plant Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:15829600
Comments: To generate 35S:5mARF17, a 3.3 kb EcoR1-BamH1 fragment of the 6.6 kb 5mARF17 pBluescript clone was subcloned into pLBR19 downstream from the duplicated enhancer of CaMV 35S RNA promoter. See "sequence" for full insert sequence.
Proper citation: RRID:Addgene_12073 Copy
Species: Arabidopsis thaliana
Genetic Insert: ARF17
Vector Backbone Description: Backbone Size:5000; Vector Backbone:pGreenII0229; Vector Types:Plant Expression, plant transformation via Agrobacterium; Bacterial Resistance:Kanamycin
Defining Citation: PMID:15829600
Comments: See "sequence" for full insert sequence. See article for cloning details.
Proper citation: RRID:Addgene_12080 Copy
Species: Arabidopsis thaliana
Genetic Insert: tCLV3
Vector Backbone Description: Vector Backbone:E000; Vector Types:Unspecified; Bacterial Resistance:Ampicillin
Defining Citation: PMID:30026289
Proper citation: RRID:Addgene_115980 Copy
Species: Arabidopsis thaliana
Genetic Insert: GR-LhG4
Vector Backbone Description: Vector Backbone:C000; Vector Types:Unspecified; Bacterial Resistance:Ampicillin
Defining Citation: PMID:30026289
Proper citation: RRID:Addgene_115983 Copy
Species: Arabidopsis thaliana
Genetic Insert: pREV
Vector Backbone Description: Vector Backbone:A000; Vector Types:Unspecified; Bacterial Resistance:Ampicillin
Defining Citation: PMID:30026289
Proper citation: RRID:Addgene_115989 Copy
Species: Arabidopsis thaliana
Genetic Insert: pCASP1
Vector Backbone Description: Vector Backbone:A000; Vector Types:Unspecified; Bacterial Resistance:Ampicillin
Defining Citation: PMID:30026289
Proper citation: RRID:Addgene_115986 Copy
Species: Arabidopsis thaliana
Genetic Insert: pUFO
Vector Backbone Description: Vector Backbone:A000; Vector Types:Unspecified; Bacterial Resistance:Ampicillin
Defining Citation: PMID:30026289
Proper citation: RRID:Addgene_115978 Copy
Species: Arabidopsis thaliana
Genetic Insert: pCLV3
Vector Backbone Description: Vector Backbone:A000; Vector Types:Unspecified; Bacterial Resistance:Ampicillin
Defining Citation: PMID:30026289
Proper citation: RRID:Addgene_115979 Copy
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