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Plasmids are provided by Addgene and DGRC.

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Plasmid Name Proper Citation Insert Name Organism Bacterial Resistance Defining Citation Comments Vector Backbone Description Relevant Mutation Record Last Update Mentions Count
pfastbac/mBmal62-447
 
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RRID:Addgene_47335 BMAL Mus musculus Ampicillin PMID:22653727 Vector Backbone:pfastbac; Vector Types:; Bacterial Resistance:Ampicillin aa 62-447 2026-08-15 01:15:41 0
pCMV10/3xflag-Clock L74E
 
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RRID:Addgene_47338 Clock Mus musculus Ampicillin PMID:22653727 Backbone Marker:sigma; Vector Backbone:pCMV103Xflag; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin L74E 2026-08-15 01:15:41 0
TAL3576
 
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RRID:Addgene_47295 ZebrafishCommunity-tetmethylcytosinedioxygenase3(previous si:ch211-220a11.1)-left Danio rerio Ampicillin PMID:21822241 Target binding site: TCAAATCCTGAATCTCAA It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32285; Backbone Size:6447; Vector Backbone:JDS70; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0
TAL3573
 
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RRID:Addgene_47292 ZebrafishCommunity-tetmethylcytosinedioxygenase1(previous-right Danio rerio Ampicillin PMID:21822241 Target binding site: TCATGGAAGCCTTCACCC It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32287; Backbone Size:6447; Vector Backbone:JDS71; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0
TAL3579
 
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RRID:Addgene_47298 ZebrafishCommunity-TIMM22-right Danio rerio Ampicillin PMID:21822241 Target binding site: TTTGCATCAATGCCGG It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32288; Backbone Size:6447; Vector Backbone:JDS74; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0
TAL3571
 
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RRID:Addgene_47290 ZebrafishCommunity-tbx4-right Danio rerio Ampicillin PMID:21822241 Target binding site: TGGGCAACGGTCATTCCT It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32290; Backbone Size:6447; Vector Backbone:JDS78; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0
TAL3572
 
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RRID:Addgene_47291 ZebrafishCommunity-tetmethylcytosinedioxygenase1(previous-left Danio rerio Ampicillin PMID:21822241 Target binding site: TCAACTCGCGCATCCACA It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32285; Backbone Size:6447; Vector Backbone:JDS70; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:41 0
AU1-TTC30A2-pcDNA3
 
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RRID:Addgene_47324 TTC30A2 Mus musculus Ampicillin PMID:23810713 Backbone Marker:Invitrogen; Backbone Size:5546; Vector Backbone:pcDNA3; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0
AU1-TTC30B-pcDNA3
 
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RRID:Addgene_47325 TTC30B Mus musculus Ampicillin PMID:23810713 Backbone Marker:Invitrogen; Backbone Size:5546; Vector Backbone:pcDNA3; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0
pCS2-Cas9
 
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10+ mentions
RRID:Addgene_47322 Cas9 Other Ampicillin PMID:24873830 Please see the Schier lab website http://labs.mcb.harvard.edu/schier/ for detailed protocols about target site selection, sgRNA production, stop codon cassette design, Cas9 protein purification, injection and downstream analysis. This plasmid was used to prepare and inject Cas9 mRNA into zebrafish zygotes. Backbone Size:4095; Vector Backbone:pCS2; Vector Types:Mammalian Expression, CRISPR, xenopus and zebrafish expression; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 15
AU1-TTC30A1-pcDNA3
 
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RRID:Addgene_47323 TTC30A1 Mus musculus Ampicillin PMID:23810713 Backbone Marker:Invitrogen; Backbone Size:5546; Vector Backbone:pcDNA3; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:15:41 0
pBabe TIR1-9myc
 
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10+ mentions
RRID:Addgene_47328 TRANSPORT INHIBITOR RESPONSE 1 Other Ampicillin PMID:23150568 Nishimura et al., 2009, Nature Methods Please note that this version contains a nuclear export signal. A related construct without the NES can be found at: http://www.addgene.org/64945/ Vector Backbone:pBabe-puro; Vector Types:Mammalian Expression, Retroviral; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 12
TAL3562
 
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RRID:Addgene_47281 ZebrafishCommunity-stxbp1a-left Danio rerio Ampicillin PMID:21822241 Target binding site: TCAGCTTGCCCTGACCCC It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32287; Backbone Size:6447; Vector Backbone:JDS71; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0
TAL3563
 
Resource Report
Resource Website
RRID:Addgene_47282 ZebrafishCommunity-stxbp1a-right Danio rerio Ampicillin PMID:21822241 Target binding site: TGGAGGCACGGCTCTTCA It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32285; Backbone Size:6447; Vector Backbone:JDS70; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:41 0
TAL3569
 
Resource Report
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RRID:Addgene_47288 ZebrafishCommunity-SYNE2-right Danio rerio Ampicillin PMID:21822241 Target binding site: TCGCCCTCTAACTCAGCT It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32290; Backbone Size:6447; Vector Backbone:JDS78; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:41 0
reporter-gT2
 
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RRID:Addgene_47321 minCMV-dTomato_pA Other Kanamycin PMID:23907171 Vector Backbone:pcrBluntII-topo; Vector Types:CRISPR; Bacterial Resistance:Kanamycin 2026-08-15 01:15:40 0
TAL3567
 
Resource Report
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RRID:Addgene_47286 ZebrafishCommunity-swap70b-right Danio rerio Ampicillin PMID:21822241 Target binding site: TCCAGGGCTGTGAAGG It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32288; Backbone Size:6447; Vector Backbone:JDS74; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0
Cas9m2
 
Resource Report
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RRID:Addgene_47314 Cas9m2 Other Ampicillin PMID:23907171 Vector Backbone:pcDNA3.3_TOPO; Vector Types:CRISPR; Bacterial Resistance:Ampicillin 2026-08-15 01:15:41 0
pZH051
 
Resource Report
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RRID:Addgene_47311 wild type immunity region of lambda phage with tsr-venus-ub-cI Other Kanamycin PMID:22751020 Backbone Marker:NEB; Backbone Size:4225; Vector Backbone:pBR322; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin 2026-08-15 01:15:40 0
Cas9m2-VP64
 
Resource Report
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RRID:Addgene_47317 Cas9m2-VP64 Other Ampicillin PMID:23907171 Vector Backbone:pcDNA3.3_TOPO; Vector Types:CRISPR; Bacterial Resistance:Ampicillin 2026-08-15 01:15:41 0

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