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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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National Longitudinal Survey of Older Men Resource Report Resource Website 1+ mentions |
National Longitudinal Survey of Older Men (RRID:SCR_008947) | NLS Older Men, | data or information resource, data set | A dataset that permits examination of health, economic, work, and retirement trajectories for a representative national sample of men from middle to old age. The original sample of 5,020 men, first interviewed in 1966, was re-interviewed periodically until 1983 under a contract with the US Department of Labor. The study provided a detailed longitudinal record of their labor market activity, health, financial status, family structure, and attitudes toward and experience in retirement. The NIA grant made possible a re-interview in 1990 with the surviving men and the widows (or other next-of-kin) of the decedents. The merging of the 1990 data includes death certificate information for the decedents, Blacks were over-represented in the original sample in a ratio of about three or four to one, resulting in about 500 surviving black men in the sample. Information on labor market activity, income, and assets also is available for a sample of about 1,350 widows, 90 percent of whom are between 60 and 89 years of age. This information can be linked to earlier data on the women''s health and work activity that was reported by their late husbands. Due to the original sample selection, other NLS cohorts contain wives and daughters of the older men. These other surveys also hold a wealth of detailed information on aging and retirement issues, especially on income transfers. * Dates of Study: 1966-1990 * Study Features: Longitudinal, Minority Oversamples * Sample Size: ** 1966: 5,020 men (baseline) ** 1990: 2,092 surviving men, 1,341 widows, 865 other next-of-kin Links: * BLS Website on NLS: http://www.bls.gov/nls/ * ICPSR: http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/04675 | middle adult human, late adult human, labor, longitudinal, minority, retirement, compensation, education, educational program, employment, employment discrimination, earned degree, finance, asset, health, health care, health problem, higher education, health insurance, industry, job description, job tenure, job training, leisure, military service, occupation, pension, psychological well-being, retirement planning, unemployment, union membership, vocational education, volunteer, work attitude, working hour, male, man, interview, questionnaire, financial status, family structure, death certificate, african-american, death, widow, daughter, female, income transfer, survey, labor market, discrimination, training, alcohol use, cigarette use, demographic, family |
is listed by: Inter-university Consortium for Political and Social Research (ICPSR) has parent organization: Ohio State University; Ohio; USA |
Aging | NIA ; U.S. Department of Labor |
Publicly available to the research community | nlx_151863 | SCR_008947 | National Longitudinal Survey: 1990 Resurvey of Older Males, National Longitudinal Survey: 1990 Resurvey of Older Males (NLS-Older Males), NLS-Older Males, National Longitudinal Surveys of Older Men | 2026-08-03 09:34:16 | 3 | |||||
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Panel Study of Income Dynamics Resource Report Resource Website 10+ mentions |
Panel Study of Income Dynamics (RRID:SCR_008976) | PSID | data or information resource, data set | Long-term longitudinal dataset with information on generational links and socioeconomic and health conditions of individuals over time. The central foci of the data are economic and demographic, with substantial detail on income sources and amounts, wealth, savings, employment, pensions, family composition changes, childbirth and marriage histories, and residential location. Over the life of the PSID, the NIA has funded supplements on wealth, health, parental health and long term care, housing, and the financial impact of illness, thus also making it possible to model retirement and residential mobility. Starting in 1999, much greater detail on specific health conditions and health care expenses is included for respondent and spouse. Other enhancements have included a question series about emotional distress (2001); the two stem questions from the Composite International Diagnostic Interview to assess symptoms of major depression (2003); a supplement on philanthropic giving and volunteering (2001-03); a question series on Internet and computer use (2003); linkage to the National Death Index with cause of death information for more than 4,000 individuals through the 1997 wave, updated for each subsequent wave; social and family history variables and GIS-linked environmental data; basic data on pension plans; event history calendar methodology to facilitate recall of employment spells (2001). The reporting unit is the family: single person living alone or sharing a household with other non-relatives; group of people related by blood, marriage, or adoption; unmarried couple living together in what appears to be a fairly permanent arrangement. Interviews were conducted annually from 1968 through 1997; biennial interviewing began in 1999. There is an oversample of Blacks (30%). Waves 1990 through 1995 included a 20% Hispanic oversample; within the Hispanic oversample, Cubans and Puerto Ricans were oversampled relative to Mexicans. All data from 1994 through 2001 are available as public release files; prior waves can be obtained in archive versions. The special files with weights for families are also available. Restricted files include the Geocode Match File with information for 1968 through 2001, the 1968-2001 Death File, and the 1991 Medicare Claims File. * Dates of Study: 1968-2003 * Study Features: Longitudinal, Minority Oversampling * Sample Size: 65,000+ Links * ICPSR Series: http://www.icpsr.umich.edu/icpsrweb/ICPSR/series/00131 * ICPSR 1968-1999: Annual Core Data: http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/07439 * ICPSR 1968-1999: Supplemental Files: http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/03202 * ICPSR 1989-1990: Latino Sample: http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/03203 | longitudinal, minority, employment, income, wealth, expenditure, health, marriage, childbearing, child development, philanthropy, education, family income, attitude, economic behavior, economic change, economic condition, employment history, family, family history, fertility, food aid, household expenditure, household income, housing, population trend, poverty, social change, social indicator, socioeconomic status, african-american, survey, interview, questionnaire, census data, latino, economic status, demographic, intergeneration, individual, health condition, economic, income source, income amount, pension, family composition, childbirth, marriage history, residential location, emotional distress, hispanic, cuban, puerto rican, mexican |
is listed by: Inter-university Consortium for Political and Social Research (ICPSR) has parent organization: University of Michigan; Ann Arbor; USA |
Aging | NIA ; U.S. Department of Health and Human Services ; APSE ; United States Department of Agriculture ; NICHD ; NSF |
Public, Acknowledgement requested | nlx_152067 | SCR_008976 | Panel Study of Income Dynamics - PSID, PSID - A national survey of socioeconomics and health over lifetimes and across generations, Panel Study of Income Dynamics (PSID) | 2026-08-03 09:34:10 | 17 | |||||
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New Immigrant Survey Resource Report Resource Website 1+ mentions |
New Immigrant Survey (RRID:SCR_008973) | NIS | data or information resource, data set | Public use data set on new legal immigrants to the U.S. that can address scientific and policy questions about migration behavior and the impacts of migration. A survey pilot project, the NIS-P, was carried out in 1996 to inform the fielding and design of the full NIS. Baseline interviews were ultimately conducted with 1,127 adult immigrants. Sample members were interviewed at baseline, 6 months, and 12 months, with half of the sample also interviewed at three months. The first full cohort, NIS-2003, is based on a nationally representative sample of the electronic administrative records compiled for new immigrants by the US government. NIS-2003 sampled immigrants in the period May-November 2003. The geographic sampling design takes advantage of the natural clustering of immigrants. It includes all top 85 Metropolitan Statistical Areas (MSAs) and all top 38 counties, plus a random sample of other MSAs and counties. Interviews were conducted in respondents'' preferred languages. The baseline was multi-modal: 60% of adult interviews were administered by telephone; 40% were in-person. The baseline round was in the field from June 2003 to June 2004, and includes in the Adult Sample 8,573 respondents, 4,336 spouses, and 1,072 children aged 8-12. A follow-up was planned for 2007. Several modules of the NIS were designed to replicate sections of the continuing surveys of the US population that provide a natural comparison group. Questionnaire topics include Health (self-reports of conditions, symptoms, functional status, smoking and drinking history) and use/source/costs of health care services, depression, pain; background; (2) Background: Childhood history and living conditions, education, migration history, marital history, military history, fertility history, language skills, employment history in the US and foreign countries, social networks, religion; Family: Rosters of all children; for each, demographic attributes, education, current work status, migration, marital status and children; for some, summary indicators of childhood and current health, language ability; Economic: Sources and amounts of income, including wages, pensions, and government subsidies; type, value of assets and debts, financial assistance given/received to/from respondent from/to relatives, friends, employer, type of housing and ownership of consumable durables. * Dates of Study: 2003-2007 * Study Features: Longitudinal * Sample Size: 13,981 | longitudinal, immigrant, migration, behavior, adult human, spouse, child, questionnaire, health, family, economic, self-report, smoking, drinking, health care service, depression, pain, background, childhood history, living condition, education, migration history, marital history, military history, fertility history, language skill, employment history, social network, religion, education, work status, income, wage, pension, government subsidy, asset, debt, financial assistance, interview | has parent organization: Princeton University; New Jersey; USA | Aging | NIA ; NICHD ; Office of Behavioral and Social Sciences Research ; NSF ; US Citizenship and Immigration Services ; ASPE ; Pew Charitable Trusts |
Public: Users must complete a short registration process the first time they access the data. | nlx_152061 | SCR_008973 | 2026-08-03 09:34:10 | 2 | ||||||
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National Survey of Midlife Development in the United States Resource Report Resource Website 10+ mentions |
National Survey of Midlife Development in the United States (RRID:SCR_008972) | MIDUS | data or information resource, data set | Data set from a collaborative, interdisciplinary investigation of patterns, predictors, and consequences of midlife development in the areas of physical health, psychological well-being, and social responsibility. Respondents were asked to provide extensive information on their physical and mental health throughout their adult lives, and to assess the ways in which their lifestyles, including relationships and work-related demands, contributed to the conditions experienced. An additional series of questions focusing on childhood queried respondents regarding the presence/absence of their parents, religion, rules/punishments, love/affection, physical/verbal abuse, and the quality of their relationships with their parents and siblings. Respondents were drawn from a nationally representative random-digit-dial sample of non-institutionalized, English-speaking adults, aged 25-74, selected from working telephone banks in the coterminous United States. Those queried participated in an initial telephone interview and responded to a mail questionnaire. MIDUS 2 carried forward MIDUS 1 and enlisted a new sample of African Americans. MIDUS2 also expanded the focus by incorporating detailed neurophysiological assessments on a large subsample in three geographic regions. Data collection largely repeats T1 assessments (45 minute phone interview, 100 page self-administered questionnaire) plus additions in select areas (e.g., cognitive functioning, optimism and coping, life events, caregiving). In addition, MIDUS 2 is using diary techniques to assess daily stressors in a subsample of respondents; conducting cognitive testing through telephone interviews; collecting biological data on a subsample of respondents, including baseline biomarkers as well as laboratory challenge studies, with assessments of salivary cortisol, blood pressure, and heart rate variability; and collecting EEG measures to focus on the central circuitry of emotion, related to affect and depression. Siblings and Twins: Similar data were collected from a survey of 951 siblings of a respondent in the main survey. MIDUS also contains twins data, from a separate national survey unrelated to the main MIDUS survey. From this separate national survey, a total of 1,996 twins agreed to participate. The Twins respondents were given the same assessments as the Main and Siblings samples. Additionally, the Twins sample was asked a series of questions about their birth, shared physical characteristics, childhood and adult relationships with their twin, whether they were dressed alike as children, and whether others experienced difficulty identifying them correctly. Data and comprehensive documentation for MIDUS 1 and 2 are available via ICPSR. * Dates of Study: 1995-2008 * Study Features: Longitudinal, Minority Oversampling, Anthropometric Measures * Sample Size: ** 1995-6: 4,242 (MIDUS 1) ** 2004-6: 7,108 (MIDUS 2) Links: * ICPSR ����?? MIDUS 1: http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/02760 * ICPSR ����?? MIDUS 2: http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/04652 | adult, middle adult human, longitudinal, minority, anthropometric measure, midlife development, physical health, psychological well-being, social responsibility, sibling, twin, family relationship, family, health status, life satisfaction, lifestyle, mental health, midlife, social indicator, work attitude, behavior, psychology, social, late adult human, interview, cognitive functioning, optimism, coping, stressful life event, caregiving, questionnaire, african american, relationship, psychological factor, personality trait, positive affect, negative affect, sense of control, goal commitment, neurophysiological assessment |
is listed by: Inter-university Consortium for Political and Social Research (ICPSR) is related to: National Archive of Computerized Data on Aging (NACDA) has parent organization: Harvard Medical School; Massachusetts; USA has parent organization: University of Wisconsin-Madison; Wisconsin; USA |
Aging | MacArthur Foundation ; NIA |
Public | nlx_152055 | http://midmac.med.harvard.edu/ | SCR_008972 | Midlife Development in the U.S. | 2026-08-03 09:34:01 | 25 | ||||
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National Survey of the Japanese Elderly Resource Report Resource Website |
National Survey of the Japanese Elderly (RRID:SCR_008971) | NSJE | data or information resource, data set | A panel data set for use in cross-cultural analyses of aging, health, and well-being between the U.S. and Japan. The questionnaires were designed to be partially comparable to many surveys of the aged, including Americans'' Changing Lives; 1984 National Health Interview Survey Supplement on Aging; Health and Retirement Study (HRS), and Well-Being Among the Aged: Personal Control and Self-Esteem (WBA). NSJE questionnaire topics include: * Demographics (age, sex, marital status, education, employment) * Social Integration (interpersonal contacts, social supports) * Health Limitations on daily life and activities * Health Conditions * Health Status (ratings of present health) * Level of physical activity * Subjective Well-Being and Mental Health Status (life satisfaction, morale), * Psychological Indicators (life events, locus of control, self-esteem) * Financial situation (financial status) * Memory (measures of cognitive functioning) * Interviewer observations (assessments of respondents) The NSJE was based on a national sample of 2,200 noninstitutionalized elderly aged 60+ in Japan. This cohort has been interviewed once every 3 years since 1987. To ensure that the data are representative of the 60+ population, the samples in 1990 and 1996 were refreshed to add individuals aged 60-62. In 1999, a new cohort of Japanese adults aged 70+ was added to the surviving members of previous cohorts to form a database of 3,990 respondents 63+, of which some 3,000 were 70+. Currently a 6-wave longitudinal database (1987, 1990, 1993, 1996, 1999, & 2002) is in place; wave 7 began in 2006. Data Availability: Data from the first three waves of the National Survey of the Japanese Elderly are currently in the public domain and can be obtained from ICPSR. Additional data are being prepared for future public release. * Dates of Study: 1987-2006 * Study Features: Longitudinal, International * Sample Size: ** 1987: 2,200 ** 1990: 2,780 ** 1993: 2,780 ** 1996: ** 1999: 3,990 ** 2002: ** 2006: Links: * 1987 (ICPSR): http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/06842 * 1990 (ICPSR): http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/03407 * 1993 (ICPSR): http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/04145 * 1996 (ICPSR): http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/26621 | longitudinal, international, japan, demographic, health status, mental health, late adult human, psychological wellbeing, social integration, survey, age, sex, marital status, education, employment, interpersonal contact, social support, health, physical activity, life satisfaction, morale, financial status, memory, cognitive functioning, interview, questionnaire |
is listed by: Inter-university Consortium for Political and Social Research (ICPSR) has parent organization: National Archive of Computerized Data on Aging (NACDA) has parent organization: University of Michigan; Ann Arbor; USA |
Aging, Noninstitutionalized, Late adult human | Japanese Ministry of Health Labor and Welfare ; Longevity Foundation ; NIA AG06643-08 |
Public | nlx_152040 | SCR_008971 | 2026-08-03 09:34:17 | 0 | ||||||
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Religion Aging and Health Survey Resource Report Resource Website |
Religion Aging and Health Survey (RRID:SCR_003625) | Religion Aging and Health Survey | data or information resource, data set | Data set that looked at religion, self-rated health, depression, and psychological well-being in a sample of older Blacks and older Whites (aged 65 and over) within the United States. Questions were asked regarding religious status, activities, and beliefs among those who currently practice the Christian faith, those who used to be Christian but are not now, and those who have never been associated with any religion during their lifetimes. Demographic variables include age, race, sex, education, and income. Wave II was collected in 2004 and reinterviewed 1,024 respondents. There were 75 respondents who refused to participate, 112 who could not be located, 70 that were too ill for participation, 11 who had moved to nursing homes and 208 were deceased. * Dates of Study: 2001- 2004 * Study Features: Longitudinal, Minority Oversample * Sample Size: 1,500 | late adult human, religion, christianity, church membership, depression, health attitude, health problem, prayer, psychological wellbeing, religious behavior, religious belief, religious denomination, worship, caucasian, african american, interview, longitudinal, minority |
is listed by: Inter-university Consortium for Political and Social Research (ICPSR) has parent organization: University of Michigan; Ann Arbor; USA |
Aging, Depressive Disorder | NIA 5 R01 AG014749 | nlx_157777 | SCR_003625 | 2026-08-03 09:32:17 | 0 | |||||||
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Seattle Longitudinal Study Resource Report Resource Website |
Seattle Longitudinal Study (RRID:SCR_003654) | SLS | data or information resource, data set | Data set from an ongoing, longitudinal-sequential study of adult-cognitive development, which began in 1956, that focuses on individual differences in age-related changes and differences across cohorts. The general purpose of the study is to examine the changes in intelligence and various abilities throughout adulthood. The data provide a normative base to determine the ages of detectable decrements in ability and the magnitudes of the decrements. The study also seeks to examine patterns of generational differences and age-related differences and to determine the effects of educational intervention on intellectual decline. This study is a mixed cross-sectional, longitudinal, and time-lag design. Included are family studies of cognitive similarity, prospective studies of early signs of dementia via psychological and genetic markers, as well as the investigation of personality and demographic variables that affect cognitive change in adults from young adulthood to advanced old age. Questionnaire topics include health behavior, behavioral rigidity, family environment, Life Complexity Inventory, CES-D Depression, and cognitive and neuropsychology batteries. Group Health Cooperative of Puget Sound Medical Records and Pharmacy Records. * Dates of Study: 1956-Present * Study Features: Longitudinal * Sample Size: 6,000+ | late adult human, blood pressure, cognition, cohort study, exercise, female, leisure activity, likelihood function, linear model, male, memory, middle adult human, multivariate analysis, professional autonomy, risk factor, washington, longitudinal, psychological development, personality, demographic, cognitive ability, cognitive functioning, cognitive impairment, cognitive processes, intelligence, questionnaire, health behavior, behavioral rigidity, family environment, life complexity inventory, ces-d depression, cognitive battery, neuropsychology battery, behavior |
is listed by: Inter-university Consortium for Political and Social Research (ICPSR) has parent organization: Pennsylvania State University |
Aging, Dementia, Cognition disorder | NIA | PMID:19606423 | Must consult data owners directly | nlx_157807 | http://geron.psu.edu/sls/ | SCR_003654 | Seattle Longitudinal Study (SLS) of Adult Cognitive Development, Seattle Longitudinal Study of Adult Cognitive Development | 2026-08-03 09:32:30 | 0 | |||
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Social Environment and Biomarkers of Aging Study in Taiwan Resource Report Resource Website |
Social Environment and Biomarkers of Aging Study in Taiwan (RRID:SCR_003704) | SEBAS | data or information resource, data set | Data sets of information regarding the health and well-being of older persons in Taiwan (from 2000 and 2006), in particular the relationship between life challenges and mental and physical health, the impact of social environment on the health and well-being of the elderly, and biological markers of health and stress. The study collected self-reports of physical, psychological, and social well-being, plus extensive clinical data based on medical examinations and laboratory analyses. Examination of health outcomes included chronic illnesses, functional status, psychological well-being, and cognitive function. Questions regarding life challenges focused on perceived stress, economic difficulties, security and safety, and the consequences of a major earthquake. Biological markers were used to identify cardiovascular risk factors, metabolic process measures, immune-system activity, the hypothalamic-pituitary adrenal axis, and sympathetic nervous system activity. The study design consists of face-to-face interviews with participants drawn from a random sub-sample of participants from 27 PSUs from the 1999 Survey of Health and Living Status of the Middle Aged and Elderly in Taiwan. Hospital visits and blood and urine specimens also were collected. A second wave of SEBAS was conducted in 2006 using a similar protocol to SEBAS 2000, but with the addition of performance assessments conducted by the interviewers at the end of the home interview. * Dates of Study: -2000, 2006 * Study Features: Longitudinal, International, Anthropometric Measures * Sample Size: 27 PSUs | late adult human, middle adult human, longitudinal, international, anthropometric measure, health, well-being, taiwan, biomarker, cognitive functioning, diet, disease, health behavior, health status, illness, leisure, life event, life satisfaction, medical evaluation, medical history, medication, mental health, physical condition, physical limitation, psychological well-being, social environment, stress, urinalysis, clinical, interview, metabolic process, immune-system, hypothalamic-pituitary adrenal, sympathetic nervous system, blood, urine |
is listed by: National Archive of Computerized Data on Aging (NACDA) is listed by: Inter-university Consortium for Political and Social Research (ICPSR) has parent organization: Georgetown University; Washington D.C.; USA |
Aging, Cardiovascular disease | Taiwan Department of Health ; Bureau of Health Promotion National Health Research Institute Taiwan ; Taiwan Provincial Government ; NIA R01 AG16790; NIA R01 AG16661 |
Public, Data Use Agreement | nlx_157859 | http://www.icpsr.umich.edu/icpsrweb/NACDA/studies/03792/version/5, http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/03792 | http://cph.georgetown.edu/Taiwan/taiwan.htm | SCR_003704 | Social Environment and Biomarkers of Aging Study (SEBAS) in Taiwan, SEBAS in Taiwan | 2026-08-03 09:32:13 | 0 | |||
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Texas University Health Science Center at San Antonio Long School of Medicine Department of Cell Systems and Anatomy Optical Imaging Core Facility Resource Report Resource Website 1+ mentions |
Texas University Health Science Center at San Antonio Long School of Medicine Department of Cell Systems and Anatomy Optical Imaging Core Facility (RRID:SCR_012171) | UTHSCSA OIF | service resource, access service resource, core facility | Service resource which makes imaging technology available to investigators on UTHSCSA campus and neighboring scientific community. Core Optical Imaging Facility offers access to technology for imaging of living cells, tissues, and animals, consultation, education and assistance regarding theory and application of optical imaging techniques, technical advice on specimen preparation techniques and probe selection. | Optical, imaging, facility, living, cell, tissue, animal, consultation, speciment, preparation |
is listed by: ScienceExchange has parent organization: University of Texas Health Science Center at San Antonio; Texas; USA |
NCI ; UTHSCSA ; NIA P01 AG19316 |
Restricted | SciEx_10134 | http://www.scienceexchange.com/facilities/optical-imaging-facility-oif | SCR_012171 | University of Texas Health Science Center at San Antonio Optical Imaging Facility, University of Texas Health Science Center at San Antonio Optical Imaging Facility (OIF), UTHSCSA Optical Imaging Facility, UTHSCSA Optical Imaging Facility (OIF) | 2026-08-03 09:34:55 | 1 | |||||
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ArchR Resource Report Resource Website 100+ mentions |
ArchR (RRID:SCR_020982) | software toolkit, software application, data processing software, data analysis software, software resource | Software R package for processing and analyzing single-cell ATAC-seq data. Used for integrative single cell chromatin accessibility analysis.Provides intuitive, user focused interface for complex single cell analysis, including doublet removal, single cell clustering and cell type identification, unified peak set generation, cellular trajectory identification, DNA element-to-gene linkage, transcription factor footprinting, mRNA expression level prediction from chromatin accessibility and multi-omic integration with single-cell RNA sequencing. | single-cell ATAC-seq data analysis, single-cell ATAC-seq data processing, single cell chromatin accessibility analysis, doublet removal, single cell clustering, cell type identification, unified peak set generation, cellular trajectory identification, transcription factor footprinting | NHGRI RM1 HG007735; NHGRI UM1 HG009442; NCI R35 CA209919; NHGRI UM1 HG009436; NCI U2C CA233311; NIAID U19 AI057266; NIA K99 AG059918; American Society of Hematology Scholar Award ; International Collaborative Award ; Defense Advanced Research Project Agency ; Ray and Dagmar Dolby Family Fund ; Stanford Cancer Institute-Goldman Sachs Foundation Cancer Research Award |
PMID:33633365 | Free, Available for download, Freely available | https://github.com/GreenleafLab/ArchR, https://www.archrproject.com/, https://github.com/GreenleafLab/ArchR_2020 | SCR_020982 | 2026-08-03 09:37:14 | 358 | ||||||||
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Keypoint MoSeq Resource Report Resource Website 1+ mentions |
Keypoint MoSeq (RRID:SCR_025032) | software resource, source code | Software application as machine learning-based platform for identifying behavioral modules from keypoint data without human supervision. Package provides tools for fitting MoSeq model to keypoint tracking data. Used to infer pose dynamics with keypoint data in addition to behavioral syllables. | OpenBehavior, infer pose dynamics, keypoint data, identifying behavioral modules, keypoint tracking data, parsing behavior, linking point tracking to pose dynamics, | has parent organization: Harvard University; Cambridge; United States | NIA RF1AG073625; NINDS R01NS114020; NINDS U24NS109520; Simons Foundation Autism Research Initiative ; Simons Collaboration on Plasticity and the Aging Brain ; NINDS U19NS113201; Simons Collaboration on the Global Brain ; NINDS F31NS113385; NINDS F31NS122155; Alfred P. Sloan Foundation ; Salk Collaboration Grant |
DOI:10.1101/2023.03.16.532307 | Free, Available for download, Freely available | SCR_025032 | 2026-08-03 09:38:24 | 9 | ||||||||
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MiMeDB Resource Report Resource Website 1+ mentions |
MiMeDB (RRID:SCR_025108) | data or information resource, database | Database containing detailed information about small molecules produced by human microbiome. Provides metabolite data including structure, names, descriptions, chemical taxonomy, chemical ontology, physico-chemical data, spectra and contains detailed information about microbes that produce these chemicals, enzymatic reactions responsible for their production, bioactivity of chemicals and anatomical location of these chemicals and microbes. Many data fields in the database are hyperlinked to other databases including FooDB, HMDB, KEGG, PubChem, MetaCyc, ChEBI, UniProt, and GenBank. Database is FAIR compliant.The data in MiMeDB are released under the Creative Commons (CC) 4.0 License. | FAIR, small molecule metabolites, human microbiome, metabolite data, |
works with: HMDB works with: KEGG works with: PubChem works with: MetaCyc works with: CHEBI works with: UniProt works with: GenBank |
NIA U19 AG063744; Natural Sciences and Engineering Research Council of Canada ; Canadian Institutes for Health Research ; Canada Foundation for Innovation ; Genome Canada |
PMID:36215042 | Free, Freely available | SCR_025108 | , Microbial Metabolites Database, The Human Microbial Metabolome Database | 2026-08-03 09:38:25 | 6 | |||||||
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Find My Understudied Genes Resource Report Resource Website 1+ mentions |
Find My Understudied Genes (RRID:SCR_025047) | FMUG | software resource, source code, software application | Software data-driven tool to identify understudied genes and characterize their tractability. Users submit list of human genes and can filter these genes down based on list of factors. Code to generate Find My Understudied Genes app for Windows, iOS and macOS platforms. | has parent organization: Northwestern University; Illinois; USA | NIGMS T32GM008449; Northwestern University ; Moderna Inc ; NSF ; NAIAD U19AI135964; Simons Foundation ; NIA K99AG068544 |
DOI:10.7554/eLife.93429 | Free, Available for download, Freely available | https://github.com/amarallab/fmug | SCR_025047 | 2026-08-03 09:38:32 | 2 | |||||||
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eMouseAtlas Resource Report Resource Website 50+ mentions |
eMouseAtlas (RRID:SCR_002981) | EMAP, EMA, EMAGE, MAP, EMAP, MAP2.0, | data or information resource, atlas, database | Detailed multidimensional digital multimodal atlas of C57BL/6J mouse nervous system with data and informatics pipeline that can automatically register, annotate, and visualize large scale neuroanatomical and connectivity data produced in histology, neuronal tract tracing, MR imaging, and genetic labeling. MAP2.0 interoperates with commonly used publicly available databases to bring together brain architecture, gene expression, and imaging information into single, simple interface.Resource to visualise mouse development, identify anatomical structures, determine developmental stage, and investigate gene expression in mouse embryo. eMouseAtlas portal page allows access to EMA Anatomy Atlas of Mouse Development and EMAGE database of gene expression.EMAGE is freely available, curated database of gene expression patterns generated by in situ techniques in developing mouse embryo. EMA, e-Mouse Atlas, is 3-D anatomical atlas of mouse embryo development including histology and includes EMAP ontology of anatomical structure, provides information about shape, gross anatomy and detailed histological structure of mouse, and framework into which information about gene function can be mapped. | Mouse Atlas Project, molecular neuroanatomy resource, adult mouse, mouse, brain, c57bl/6j, magnetic resonance microscopy, diffusion-weighted image, blockface imaging, immunohistochemistry, in situ hybridization, neuroanatomy, mri, dti, brain architecture, gene expression, neuroimaging, ontology, connectivity, histology, neuronal tract tracing, genetic labeling, newborn mouse, experimental protocol, bio.tools, ontology, histology, mouse embryo, gene expression, gxd query interface, digital anatomical atlas, spatial region, domain, 2d, 3d, virtual embryo model, development atlas, standard anatomical nomenclature, developmental staging criteria, spatially mapped, anatomy nomenclature, molecular neuroanatomy resource, embryonic mouse, FASEB list |
is related to: GUDMAP Ontology is related to: EMAGE Gene Expression Database is related to: EMAGE Gene Expression Database is related to: HUDSEN is related to: Mouse Genome Informatics: The Mouse Gene Expression Information Resource Project has parent organization: University of Edinburgh; Scotland; United Kingdom has parent organization: Jackson Laboratory is parent organization of: Minimal Anatomical Terminology |
Medical Research Council ; NINDS ; NIBIB ; NIDA ; NIDCD ; NIA |
PMID:15043218 PMID:18077470 PMID:16381949 |
Free, Freely available | nif-0000-00038, nif-0000-00505, biotools:emap, biotools:ma, SCR_007281 | http://www.emouseatlas.org/emap/home.html, https://bio.tools/emap, https://bio.tools/ma | http://genex.hgu.mrc.ac.uk/, http://www.loni.ucla.edu/MAP/ | SCR_002981 | emouseatlas, e-mouse Atlas, EMAGE Gene Expression Database, EMA, Edinburgh Mouse Atlas of Gene Expression, e-Mouse Atlas, EMA Anatomy Atlas of Mouse Development | 2026-08-03 09:32:10 | 69 | |||
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IADRP Resource Report Resource Website 1+ mentions |
IADRP (RRID:SCR_004043) | IADRP | data or information resource, database | Database that brings together funded Alzheimer's disease (AD) research supported by public and private organizations both in the US and abroad all categorized using the Common Alzheimer's Disease Research Ontology or CADRO. Launched as a joint collaboration between the National Institute on Aging (NIH) and the Alzheimer's Association, IADRP enables users the ability to assess the portfolios of major organizations (currently 30) for areas of overlap as well as areas of opportunities in which to collaborate and coordinate in a collective effort to advance AD research. | late adult human, alzheimer, database |
uses: CADRO has parent organization: Alzheimers Association has parent organization: National Institute on Aging |
Alzheimer's disease, Aging | NIA | PMID:24780512 | The community can contribute to this resource | nlx_158471 | SCR_004043 | International Alzheimer's Disease Research Portfolio, International Alzheimers Disease Research Portfolio | 2026-08-03 09:32:36 | 3 | ||||
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Language Map Experiment Management System Resource Report Resource Website |
Language Map Experiment Management System (RRID:SCR_004562) | Language Map EMS | data or information resource, database | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on January 11, 2023. An experiment management system for researchers studying language organization in the brain. Data from thirteen patients are available as a public demo. Language Map EMS | fmri, 3d models, anatomy, cortex, data managementas of 2006/11 data from 110 patients in repository., imaging, mri, segmentation, volume | has parent organization: University of Washington; Seattle; USA | Aging | NIMH ; NIDCD ; NIA |
THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-00065 | SCR_004562 | UW Integrated Brain Project Language Map Experiment Management System | 2026-08-03 09:32:36 | 0 | |||||
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Inside NIA: A Blog for Researchers Resource Report Resource Website |
Inside NIA: A Blog for Researchers (RRID:SCR_012812) | narrative resource, data or information resource, blog | Blog intended for grantees of the National Institute on Aging (NIA) at the NIH, as well as applicants for funding, those with an application in mind, application reviewers, and students pursuing careers in research on aging and Alzheimer's disease. | funding policy, research priority, new program, alzheimer, blog |
is used by: NIF Data Federation is used by: Integrated Blogs has parent organization: National Institute on Aging |
Aging, Alzheimer's disease | NIA | Public, Except where subject to copyright restrictions, Acknowledgement required | nlx_152701 | SCR_012812 | Inside NIA | 2026-08-03 09:35:04 | 0 | ||||||
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MIITRA atlas Resource Report Resource Website 1+ mentions |
MIITRA atlas (RRID:SCR_017566) | data or information resource, atlas | Atlas for studies of older adult brain. Includes T1-weighted template of older adult brain and tissue probability maps. Exhibits high image sharpness, provides higher inter-subject spatial normalization accuracy compared to other standardized templates and similar normalization accuracy to well-constructed study-specific templates. | Older, adult, brain, tissue, probability, map, standardized, template | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | NIA R01 AG052200 | Free, Available for download, Freely available | https://www.nitrc.org/frs/?group_id=1407&release_id=4156 | SCR_017566 | Multichannel Illinois Institute of Technology and Rush University Aging atlas | 2026-08-03 09:36:40 | 4 | |||||||
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Annotation Comparison Explorer Resource Report Resource Website 1+ mentions |
Annotation Comparison Explorer (RRID:SCR_026496) | ACE | software resource, web application | Web application for comparing cell type assignments and other cell-based annotations (e.g., donor demographics, anatomic locations, batch variables, and quality control metrics). Used for connecting brain cell types across studies of health and Alzheimer's Disease. | comparing cell type assignments, cell-based annotations, connecting brain cell types, |
has parent organization: Allen Institute is organization facet of: BRAIN Initiative Cell Atlas Network |
NINDS U24NS133077; NIA U19AG060909 |
PMID:39990500 | Free, Freely available | github.com/AllenInstitute/ACE | SCR_026496 | Annotation Comparison Explorer (ACE) | 2026-08-03 09:38:50 | 1 | |||||
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histoCAT Resource Report Resource Website 1+ mentions |
histoCAT (RRID:SCR_026499) | software toolkit, software resource, source code | Software package to visualize and analyse multiplexed image cytometry data interactively. | visualize and analyse multiplexed image, image cytometry data, interactively | NIA R01AG066027; NIMH U19MH114830 |
PMID:28783155 | Free, Available for download, Freely available | SCR_026499 | Histology Topography Cytometry Analysis Toolbox | 2026-08-03 09:38:50 | 2 |
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