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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
hypeR
 
Resource Report
Resource Website
1+ mentions
hypeR (RRID:SCR_027229) software toolkit, software resource, source code Software R package that supports different types of gene set enrichment workflows. Offers multiple enrichment, visualization, and sharing methods in addition to novel features such as hierarchical geneset analysis and built-in markdown reporting. gene set enrichment workflows, hierarchical geneset analysis, built-in markdown reporting, NIA 2U19AG023122;
William M. Wood Foundation
PMID:31498385 Free, Available for download, Freely available SCR_027229 2026-08-03 09:39:26 1
Bioage
 
Resource Report
Resource Website
50+ mentions
Bioage (RRID:SCR_027788) software toolkit, software resource, source code Software R package uses published biomarker algorithms to calculate three biological aging measures: Klemera-Doubal Method (KDM) biological age, phenotypic age, and homeostatic dysregulation. Used to quantify biological aging based on analysis of chronological age and mortality risk. Biological age calculations, Klemera-Doubal Method, biological age, phenotypic age, homeostatic dysregulation, quantify biological aging, analysis of chronological age, mortality risk, NIA R01 AG061378;
NIA R01 AG066887
PMID:34725754 Free, Available for download, Freely available SCR_027788 2026-08-03 09:39:18 54
dreamlet
 
Resource Report
Resource Website
dreamlet (RRID:SCR_028168) software toolkit, software resource, source code Software R package enables differential expression analysis on multi-sample single cell datasets using linear (mixed) models with precision weights. Perform differential expression analysis, multi-sample single cell datasets, linear mixed models, precision weights, NIA R01AG067025;
NIA R01AG065582;
NIA R01AG050986;
NIA P30AG066514;
NIMH R01MH109677;
NIMH R01MH125246;
NIMH RF1MH128970;
NIMH U01MH116442;
NINDS U01NS125580
PMID:36993704 Free, Available for download, Freely available SCR_028168 2026-08-03 09:39:19 0

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