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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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volBrain Resource Report Resource Website 1+ mentions |
volBrain (RRID:SCR_021020) | software resource | Software tool as MRI brain segmentation system to obtain automatically volumetric brain information from RI data. Works in automatic manner and is able to provide brain structure volumes without any human interaction. | MRI brain volumetry system, segmentation system, volumetric brain information, MRI data, | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | PMID:27512372 | Free, Available for download, Freely available | SCR_021020 | volBrain: online MRI segmentation, MRI Brain Volumetry System | 2026-08-01 12:07:02 | 3 | ||||||||
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Innovadyne Technologies: Nanodrop 2 Pipetting System Resource Report Resource Website |
Innovadyne Technologies: Nanodrop 2 Pipetting System (RRID:SCR_021033) | instrument resource | Liquid handling system designed for high precision pipetting. | Commercially available | SCR_021033 | 2026-08-01 12:07:04 | 0 | ||||||||||||
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Phantom: Miro C110 camera Resource Report Resource Website |
Phantom: Miro C110 camera (RRID:SCR_021081) | instrument resource | Small, sturdy camera with all standard Phantom features and image quality. Memory can be partitioned up to 63 times to deliver images from 1.3 Mpx sensor with 12-bit depth and tightly packed 5.6 micron pixel size. Miro C110 is capable of 1295 fps at 720p HD and up to 52445 fps at reduced resolutions. | small camera, Phantom, image quality, instrument, equipment, USEDit | Commercially available | Model_Number_Micro_C110 | SCR_021081 | Phantom Miro C110 | 2026-08-01 12:07:12 | 0 | |||||||||
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BioSpherix: C Shuttle Glove Box hood Resource Report Resource Website |
BioSpherix: C Shuttle Glove Box hood (RRID:SCR_021082) | C-Shuttle | instrument resource | Oxygen controlled hood for handling cells under physiologic or pathophysiologic conditions. Double door entry allows import/export of materials without perturbation of experimental conditions. Optional control of carbon dioxide as well. Receives C-Chamber Incubator Subchamber to transfer cells without exposure to room air. | BioSpherix, Physioxia, Physioxic, Hypoxia, Hypoxic, Glove box, oxygen, cell culture hood, carbon dioxide, instrument, equipment, USEDit | Commercially available | SCR_021082 | BioSpherix C-Shuttle Glove Box, Hypoxic Glove Box, C-Shuttle laboratory glove box | 2026-08-01 12:07:05 | 0 | |||||||||
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Anton Paar: MCR501 rheometer Resource Report Resource Website |
Anton Paar: MCR501 rheometer (RRID:SCR_021122) | instrument resource | Stress controlled rheometer.THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 19,2026. | Stress controlled rheometer, rheometer, instrument, equipment, USEDit | is organization facet of: Anton Paar | THIS RESOURCE IS NO LONGER IN SERVICE. | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_021122.pdf | Model_Number_MCR501 | SCR_021122 | SMaRT – MCR501, , Modular Compact Rheometer 501, SMaRT – MCR501 (Anton Paar) | 2026-08-01 12:07:13 | 0 | |||||||
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ALLMAP Resource Report Resource Website |
ALLMAP (RRID:SCR_021120) | software resource | Software tool for computing scaffold ordering that maximizes colinearity across collection of maps including genetic, physical or comparative maps into final chromosome build. Robust scaffold ordering based on multiple maps. ALLMAPS is robust against common mapping errors, and generates sequences that are maximally concordant with input maps. Used in building high quality genome assemblies. | Computing scaffold ordering, colinearity across map collection maximization, final chromosome build, robust scaffold ordering, multiple maps, common mapping errors, genome assemblies | Gordon and Betty Moore Foundation ; National Science Foundation |
DOI:10.1186/s13059-014-0573-1 | Free, Available for download, Freely available | SCR_021120 | 2026-08-01 12:07:04 | 0 | |||||||||
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BioSpherix: OxyCycler GT4181CN Controller Resource Report Resource Website |
BioSpherix: OxyCycler GT4181CN Controller (RRID:SCR_021113) | GT4181CN | instrument resource | Carbon Monoxide, Nitric Oxide, O2, and CO2 controller with limit control of relative humidity and monitoring of temperature conditions when used in combination with C-Chamber incubator subchamber from BioSpherix. Features secondary monitors for both Carbon Monoxide and Nitric Oxide and may be used in combination with I-Hood Incubator Hood from BioSpherix to ventilate fumes. | Carbon Monoxide, Nitric Oxide, O2, CO2, controller, instrument, equipment, USEDit | Commercially available | SCR_021113 | Carbon Monoxide, CO2, OxyCycler GT4181CN Dynamic O2, OxyCycler GT4181CN, and Nitric Oxide Subchamber Cell Culture System | 2026-08-01 12:07:04 | 0 | |||||||||
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PySyft Resource Report Resource Website 1+ mentions |
PySyft (RRID:SCR_021012) | software resource | Software Python library for secure and private Deep Learning. Decouples private data from model training, using Federated Learning, Differential Privacy, and Encrypted Computation and Homomorphic Encryption within main deep learning frameworks. Used for computing on data you do not own and cannot see. | Private Deep Learning, deep learning, decouples private data, unseen data computing |
is related to: PyTorch is related to: tensorflow |
Free, Available for download, Freely available | SCR_021012 | 2026-08-01 12:07:10 | 9 | ||||||||||
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Thermo Fisher: Applied Biosystems: QuantStudio 12K Flex RealTime PCR System Resource Report Resource Website 10+ mentions |
Thermo Fisher: Applied Biosystems: QuantStudio 12K Flex RealTime PCR System (RRID:SCR_021098) | instrument resource | System can simultaneously run up to four 3072 reaction QuantStudio 12K Flex OpenArray plates in about four hours. When combined with the QuantStudio 12K Flex OpenArray AccuFill System, can produce up to 110000 data points or more in 8 hour day. Has touch screen interface and comprehensive software analysis tools for gene expression, genotyping, and digital PCR increase productivity. Has five interchangable block formats including: OpenArray plate, TaqMan Array card, 384-well, and 96-well (0.1 and 0.2 mL). | Real Time PCR System, QuantStudio 12K Flex OpenArray, instrument, equipment, USEDit | uses: Applied Biosystems QuantStudio 12K Flex RT PCR Software | Commercially available | SCR_021098 | QuantStudio 12K Flex Real-Time PCR System | 2026-08-01 12:07:05 | 14 | |||||||||
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BioSpherix: ProOx C21 Controller Resource Report Resource Website 1+ mentions |
BioSpherix: ProOx C21 Controller (RRID:SCR_021131) | C21 | instrument resource | Compact O2 and CO2 Subchamber Controller used together with C-Chamber Incubator Subchamber from BioSpherix or chambers from other manufacturers. | Compact controller, Oxygen controller, CO2 controller, Subchamber Controller, BioSpherix, instrument, equipment, USEDit | is listed by: USEDit | Commercially Available | Model_Number_ProOx C21 | SCR_021131 | ProOx C21, ProOx C21 Oxygen and Carbon Dioxide Subchamber Controller | 2026-08-01 12:07:04 | 1 | |||||||
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BioSpherix: ProOx 360 Controller Resource Report Resource Website 1+ mentions |
BioSpherix: ProOx 360 Controller (RRID:SCR_021130) | P360 | instrument resource | Versatile high infusion rate O2 controller.Controls Oxygen and may be used with BioSpherix C-Chamber Incubator Subchamber, C-Shuttle Glove Box, I-Glove Incubator Glove Box, Xvivo System Model X3 Cytocentric Cell Incubation and Handling Platfrom, or A-Chamber Animal Chamber. Featuring capability to infuse gas over range 1-140 SCFH, may be used together with chambers which are either home built or are available from other manufacturers. | Versatile high infusion rate O2 controller, O2 controller, Oxygen controller, BioSpherix, instrument, equipment, USEDit | is listed by: USEDit | Commercially Available | Model_Number_ProOx 360 | SCR_021130 | ProOx 360 High Infusion Rate O2 Controller, ProOx 360 | 2026-08-01 12:07:13 | 3 | |||||||
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Multilayer Connectome of Caenorhabditis elegans Resource Report Resource Website |
Multilayer Connectome of Caenorhabditis elegans (RRID:SCR_021009) | data or information resource | Networks of extrasynaptic aminergic and peptidergic interactions in C. elegans | Networks, extrasynaptic aminergic interactions, peptidergic interactions, C.Elegans | DOI:10.1371/journal.pcbi.1005283 | Free, Freely available | SCR_021009 | 2026-08-01 12:07:02 | 0 | ||||||||||
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BioSpherix: ProOx 110 Controller Resource Report Resource Website 1+ mentions |
BioSpherix: ProOx 110 Controller (RRID:SCR_021129) | P110, ProOx 110 | instrument resource | Compact, versatile O2 controller.Controls Oxygen and may be used with either C-Chamber Incubator Subchamber or A-Chamber Animal Chamber from BioSpherix. May be used with home-built or other manufacturers chambers. | Compact O2 controller, controls Oxygen, BioSpherix, instrument, equipment, USEDit | is listed by: USEDit | Commercially Available | Model_Number_ProOx 110 | SCR_021129 | BioSpherix ProOx 110 Compact O2 Controller | 2026-08-01 12:07:06 | 3 | |||||||
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BioSpherix: ProCO2 120 Controller Resource Report Resource Website 1+ mentions |
BioSpherix: ProCO2 120 Controller (RRID:SCR_021127) | P120 | instrument resource | Controls CO2 levels for most physiologic concentrations and may be connected with either C-Chamber Incubator Subchambers or A-Chamber Animal Chambers from BioSpherix. May also be connected with chambers which are either home built or are available from other manufacturers. These include thermal incubators, flush boxes, culture chambers, glove boxes, and other semi sealed enclosures. | CO2 levels control, physiologic concentrations, BioSpherix, instrument, equipment, USEDit | is listed by: USEDit | Commercially available | Model_Number_ProCO2 120 | SCR_021127 | ProCO2 120, ProCO2 120 Compact CO2 Controller, ProCO2 120 Compact Controller | 2026-08-01 12:07:13 | 2 | |||||||
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BioSpherix: OxyCycler AT82NN Controller Resource Report Resource Website |
BioSpherix: OxyCycler AT82NN Controller (RRID:SCR_021188) | OxyCycler AT82NN | instrument resource | Provides either dynamic or static control of parts per million levels of nitric oxide (NO) and limits the undesirable elevation NO2 in animal models when used in combination with either one or two (1 or 2) A-Chamber Animal Chambers. | Nitric Oxide, Animal Chamber Controller, NO2 Limit Control, BioSpherix, USEDit | is listed by: USEDit | Commercially Available | Model_Number_AT82NN | SCR_021188 | OxyCycler AT82NN Nitric Oxide Animal Chamber Controller with NO2 Limit Control | 2026-08-01 12:07:14 | 0 | |||||||
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Traefik Resource Report Resource Website 1+ mentions |
Traefik (RRID:SCR_021221) | software resource | Software tool based on open source solutions to make deploying microservices easy. Used for deployment of modern IT environments. Allows to expose applications to network in dynamic environment.Traefik Stack by Traefik Labs Inc. as cloud native stack to help enterprises manage their entire network across data centers, on-premises servers and public clouds.Tools options include Traefik Proxy,Traefik Enterprise,Traefik Mesh,Traefik Pilot. | HTTP reverse proxy, load balancer, Golang, deploying microservices, Traefik Labs Inc, expose applications to network, dynamic environment | Restricted | https://github.com/traefik, https://github.com/traefik/traefik | SCR_021221 | 2026-08-01 12:07:14 | 2 | ||||||||||
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BioSpherix: OxyCycler AT42N Controller Resource Report Resource Website |
BioSpherix: OxyCycler AT42N Controller (RRID:SCR_021187) | OxyCycler AT42N | instrument resource | Provides either dynamic or static control of parts per million levels of nitric oxide (NO) in animal models modeling when used in combination with either one or two (1 or 2) A-Chamber Animal Chambers. | Nitric Oxide, Animal Chamber Controller, BioSpherix, USEDit | is listed by: USEDit | Commercially Available | Model_Number_AT42N | SCR_021187 | OxyCycler AT42N Nitric Oxide Animal Chamber Controller | 2026-08-01 12:07:07 | 0 | |||||||
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BioSpherix: OxyCycler A41OV Controller Resource Report Resource Website |
BioSpherix: OxyCycler A41OV Controller (RRID:SCR_021182) | OxyCycler A41OV | instrument resource | Provides either dynamic or static control of O2 condition for animal modeling when used in combination with A-Chamber Animal Chamber. | Controller, O2 control, A-Chamber Animal Chamber, USEDit, BioSpherix | is listed by: USEDit | Commercially Available | Model_Number_A41OV | SCR_021182 | OxyCycler A41OV, A41OV OxyCycler A41OV Dynamic O2 Animal Chamber Controller | 2026-08-01 12:07:05 | 0 | |||||||
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BioSpherix: OxyCycler A42OC Controller Resource Report Resource Website |
BioSpherix: OxyCycler A42OC Controller (RRID:SCR_021183) | OxyCycler A42OC | instrument resource | Provides either dynamic or static control of O2 and CO2 conditions for animal modeling when used in combination with one or two A-Chamber Animal Chamber(s). | O2 control, CO2 control, Animal Chamber, USEDit, BioSpherix | is listed by: USEDit | Commercially Available | Model_Number_A42OC | SCR_021183 | OxyCycler A42OC Controller | 2026-08-01 12:07:14 | 0 | |||||||
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GMSH Resource Report Resource Website 10+ mentions |
GMSH (RRID:SCR_021226) | software resource | Open source software tool as 3D finite element grid generator with build in CAD engine and post processor. Provides meshing tool with parametric input and advanced visualization capabilities. Built around geometry, mesh, solver and post processing modules.Specification of any input to these modules is done either interactively using graphical user interface, in ASCII text files using Gmsh own scripting language (.geo files), or using C plus plus, C, Python or Julia Application Programming Interface. | 3D finite element grid generator, CAD engine build in, post processor, meshing tool | Free, Available for download, Freely available | https://gitlab.onelab.info/gmsh/gmsh | SCR_021226 | 2026-08-01 12:07:06 | 16 |
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