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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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DBTSS: Database of Transcriptional Start Sites Resource Report Resource Website 100+ mentions |
DBTSS: Database of Transcriptional Start Sites (RRID:SCR_002354) | DBTSS | database, data or information resource | Database of transcriptional start sites (TSSs) representing exact positions in the genome based on a unique experimentally validated TSS sequencing method, TSS Seq. A major part of human adult and embryonic tissues are covered. DBTSS contains 491 million TSS tag sequences collected from a total of 20 tissues and 7 cell cultures. Also integrated is generated RNA-seq data of subcellular- fractionated RNAs and ChIP Seq data of histone modifications, RNA polymerase II and several transcriptional regulatory factors in cultured cell lines. Also included is external epigenomic data, such as chromatin map of the ENCODE project. They associated those TSS information with public and original SNV data, in order to identify single nucleotide variations (SNVs) in the regulatory regions. | cdna, cdna library, transcriptional start site, transcriptome, transcriptome analysis, tss-seq, genome, adult human, embryonic, cell, rna-seq, subcellular, rna, chip seq data, histone modification, rna polymerase ii, transcriptional regulatory factor, cell line, single nucleotide variation, regulatory region, genetic valuation, transcriptional regulation, bio.tools, FASEB list |
is used by: Transcriptional Regulatory Element Database is listed by: OMICtools is listed by: bio.tools is listed by: Debian has parent organization: University of Tokyo; Tokyo; Japan |
Japan Society for the Promotion of Science ; Japanese Ministry of Education Culture Sports Science and Technology MEXT |
PMID:22086958 PMID:19910371 PMID:17942421 PMID:16381981 PMID:14681363 PMID:11752328 |
nif-0000-02738, biotools:dbtss, OMICS_01860 | https://bio.tools/dbtss | SCR_002354 | DBTSS: Database of Transcriptional Start Sites, DataBase of Transcriptional Start Sites | 2026-08-08 12:03:53 | 127 | |||||
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MachiBase Resource Report Resource Website 1+ mentions |
MachiBase (RRID:SCR_003078) | MachiBase | database, data or information resource | Database for Drosophila melanogaster transcription profiling that allows users to search the Drosophilia genome, see sequence overviews, and look at various transcripts. The data were generated in conjunction with the recently developed high-throughput genome sequencer Illumina / Solexa using a newly developed 5'-end mRNA collection method. Approximately 25 million 25-27 nucleotide (nt) 5'-end mRNA tags from the embryos, larvae, young males, young females, old males, old females, and S2 (culture cell line) of D. melanogaster were collected. By arranging this vast amount of expression tag with other annotated data, they have built a one-stop service for Drosophila melanogaster transcription profiling. | transcription profiling, genome, sequence, transcript, mrna, promoter, gene expression, development, embryo, larvae, young, male, female, old, s2, culture, cell line, expressed sequence tag, solexa |
is listed by: OMICtools has parent organization: University of Tokyo; Tokyo; Japan |
PMID:18842623 | Free, Available for download, Freely available | OMICS_01878, nif-0000-03092 | SCR_003078 | 2026-08-08 12:03:55 | 1 | |||||||
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MAPPER - Multi-genome Analysis of Positions and Patterns of Elements of Regulation Resource Report Resource Website 10+ mentions |
MAPPER - Multi-genome Analysis of Positions and Patterns of Elements of Regulation (RRID:SCR_003077) | MAPPER, MAPPER 2, | database, data or information resource, service resource | A platform composed of three modules: the Database, the Search Engine, and rSNPs, for the computational identification of transcription factor binding sites (TFBSs) in multiple genomes, that combines TRANSFAC and JASPAR data with the search power of profile hidden Markov models (HMMs). The Database contains putative TFBSs found in the upstream sequences of genes from the human, mouse and D.melanogaster genomes. For each gene, they scanned the region from 10,000 base pairs upstream of the transcript start to 50 base pairs downstream of the coding sequence start against all their models. Therefore, the database contains putative binding sites in the gene promoter and in the initial introns and non-coding exons. Information displayed for each putative binding site includes the transcription factor name, its position (absolute on the chromosome, or relative to the gene), the score of the prediction, and the region of the gene the site belongs to. If the selected gene has homologs in any of the other two organisms, the program optionally displays the putative TFBSs in the homologs. The Search Engine allows the identification, visualization and selection of putative TFBSs occurring in the promoter or other regions of a gene from the human, mouse, D.melanogaster, C.elegans or S.cerevisiae genomes. In addition, it allows the user to upload a sequence to query and to build a model by supplying a multiple sequence alignment of binding sites for a transcription factor of interest. rSNPs MAPPER is designed to identify Single Nucleotide Polymorphisms (SNPs) that may have an effect on the presence of one or more TFBSs. | transcription factor binding site, gene promoter, intron, non-coding exon, transcription factor, chromosome, gene, homolog, rsnp, single nucleotide polymorphism, search engine |
is listed by: OMICtools has parent organization: University of Florida; Florida; USA is parent organization of: rSNPs MAPPER |
PMID:15608292 PMID:15799782 |
THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_01877, nif-0000-03101 | http://bio.chip.org/mapper | SCR_003077 | Multi-genome Analysis of Positions and Patterns of Elements of Regulation, MAPPER 2 - Multi-genome Analysis of Positions and Patterns of Elements of Regulation, MAPPER database | 2026-08-08 12:03:42 | 11 | |||||
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CODEHOP Resource Report Resource Website 50+ mentions |
CODEHOP (RRID:SCR_002898) | CODEHOP | analysis service resource, data analysis service, production service resource, service resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented May 10, 2017. A pilot effort that has developed a centralized, web-based biospecimen locator that presents biospecimens collected and stored at participating Arizona hospitals and biospecimen banks, which are available for acquisition and use by researchers. Researchers may use this site to browse, search and request biospecimens to use in qualified studies. The development of the ABL was guided by the Arizona Biospecimen Consortium (ABC), a consortium of hospitals and medical centers in the Phoenix area, and is now being piloted by this Consortium under the direction of ABRC. You may browse by type (cells, fluid, molecular, tissue) or disease. Common data elements decided by the ABC Standards Committee, based on data elements on the National Cancer Institute''s (NCI''s) Common Biorepository Model (CBM), are displayed. These describe the minimum set of data elements that the NCI determined were most important for a researcher to see about a biospecimen. The ABL currently does not display information on whether or not clinical data is available to accompany the biospecimens. However, a requester has the ability to solicit clinical data in the request. Once a request is approved, the biospecimen provider will contact the requester to discuss the request (and the requester''s questions) before finalizing the invoice and shipment. The ABL is available to the public to browse. In order to request biospecimens from the ABL, the researcher will be required to submit the requested required information. Upon submission of the information, shipment of the requested biospecimen(s) will be dependent on the scientific and institutional review approval. Account required. Registration is open to everyone.Service to design PCR primers from protein multiple sequence alignments. NOTICE: This version of CODEHOP is no longer maintained. | degenerate, primer, primer design, degenerate primer, oligonucleotide, pcr assay, gene, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian has parent organization: Fred Hutchinson Cancer Center |
PMID:20967601 | THIS RESOURCE IS NO LONGER IN SERVICE | biotools:codehop, OMICS_02339 | https://bio.tools/codehop | SCR_002898 | COnsensus-DEgenerate Hybrid Oligonucleotide Primers, CODEHOP: COnsensus-DEgenerate Hybrid Oligonucleotide Primers | 2026-08-08 12:03:42 | 75 | |||||
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qPrimerDepot Resource Report Resource Website 100+ mentions |
qPrimerDepot (RRID:SCR_003469) | qPrimerDepot | database, data or information resource | A database that provides quantitative real time (qRT) PCR primers for 99.96% human RefSeq sequences. For 99% of intron-bearing genes, the PCR product will cross an exon-exon border which overlaps one of the largest introns. Primers are assumed to have a uniform annealing temperature of 60C, allowing them to be used in large-scale assays. | molecular probe, primer, quantitative real time pcr primer, refseq, quantitative real time pcr, FASEB list |
is listed by: OMICtools has parent organization: National Cancer Institute |
PMID:17068075 | OMICS_02324, nif-0000-03381 | SCR_003469 | qPrimerDepot - A quantitative real time PCR primer database | 2026-08-08 12:03:56 | 158 | |||||||
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HyperTree Resource Report Resource Website 1+ mentions |
HyperTree (RRID:SCR_003188) | software resource, software application, source code | Software application to visualize and navigate large trees in hyperbolic space. Features include: * visualize large trees with hundreds of nodes or more * rotate and drag the display in cartesian space * search and select nodes * copy clusters for pasting into other programs * color-code branches * label branches (eg, common family members) * zoom in and out * view phylogenetic trees and other hierarchical clusters, such as gene expression profile clusters * run on several platforms: Mac, Windows, Unix/Linux | java | is listed by: OMICtools | PMID:11038340 | Free, Available for download, Freely available | biotools:hypertree, OMICS_04814 | https://bio.tools/hypertree | SCR_003188 | 2026-08-08 12:03:51 | 8 | |||||||
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GeneFisher Resource Report Resource Website 10+ mentions |
GeneFisher (RRID:SCR_003060) | GeneFisher, GeneFisher2 | analysis service resource, data analysis service, production service resource, service resource | A web-based program for designing degenerate primers. The procedure leads to isolation of genes in a target organism using multiple alignments of related genes from different organisms. The term gene fishing refers to the technique where PCR is used to isolate a postulated but unknown target sequence from a pool of DNA. | primer design, gene, degenerate primer, degenerate, primer, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian has parent organization: Bielefeld University; North Rhine-Westphalia; Germany |
PMID:8877506 | Free, Freely available | biotools:genefisher, OMICS_02341 | https://bio.tools/genefisher | SCR_003060 | GeneFisher2 - Interactive PCR Primer Design | 2026-08-08 12:03:42 | 39 | |||||
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SynSysNet Resource Report Resource Website 1+ mentions |
SynSysNet (RRID:SCR_003180) | SynSysNet | database, data or information resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 19,2025. A curated database for synaptic proteins that provides adequate definitions of pre- and post-synaptic proteins, proteins present in sub-domains of the synapse, e.g. the synaptic vesicle and associated proteins, lipid rafts and postsynaptic density. In addition to data that was and will be gathered from the experiments conducted within SynSys - A European expertise Network on building the synapse, they have extracted and manually curated all relevant data on these proteins from other sources and provided an ontology for these. Novel splice forms are being identified that can be matched with proteomics data. Information on proteins, their 3D structure, binding small molecules Protein-Protein-Interactions (PPIs) and Compound-Protein-Interactions are integrated. Proteins or compounds can be searched and Interactive Networks can be visualized. The point Diseases present neurological diseases, to illustrate the role of SynSysNet in the medication. | gene, synapse, protein, interaction, compound, disease, structure, model, compound, protein-drug interaction, protein-protein interaction, pathway, drug-target, small molecule, interaction network, homology, drug, drug-target interaction, compound-protein interaction, visualization, proteomics, network |
is listed by: OMICtools is related to: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) is related to: KEGG has parent organization: Charite - Universitatsmedizin Berlin; Berlin; Germany |
Huntington's disease, Chorea Huntington, Epilepsy, Multiple Sclerosis, Parkinson's disease, Schizophrenia, Neurological disease | European Union Seventh FPSYNSYS 242167; DFG GRK1772; DFG GRK1360 |
PMID:23143269 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_156893, OMICS_01914 | SCR_003180 | SynSysNet - Synaptic Proteins Database | 2026-08-08 12:03:43 | 3 | ||||
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Hollywood Resource Report Resource Website |
Hollywood (RRID:SCR_002920) | Hollywood | database, data or information resource | Database built upon genomic annotation of splicing patterns of known genes derived from spliced alignment of complementary DNAs (cDNAs) and expressed sequence tags for human and mouse. It links features such as splice site sequence and strength, exonic splicing enhancers and silencers, conserved and non-conserved patterns of splicing, and cDNA library information for inferred alternative exons. A query tool allows searches for sets of exons with specific splicing characteristics or splicing regulatory element composition, or gives a graphical or sequence-level summary of splicing patterns for a specific gene. A graphical representation of gene splicing patterns is provided, and these patterns can alternatively be layered onto existing information in the UCSC Genome Browser. | alternative splicing, exon, mrna, splicing, annotation, regulatory element, ortholog, splicing pattern, cdna |
is listed by: OMICtools has parent organization: Massachusetts Institute of Technology; Massachusetts; USA; |
PMID:16381932 | Account required | OMICS_01889, nif-0000-02972 | SCR_002920 | Hollywood.mit.edu, Hollywood mRNA Alternative Splicing, Hollywood.mit.edu - Alternatively spliced mRNA | 2026-08-08 12:03:54 | 0 | ||||||
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HomoloGene Resource Report Resource Website 100+ mentions |
HomoloGene (RRID:SCR_002924) | HomoloGene | database, data or information resource, service resource | Automated system for constructing putative homology groups from complete gene sets of wide range of eukaryotic species. Databse that provides system for automatic detection of homologs, including paralogs and orthologs, among annotated genes of sequenced eukaryotic genomes. HomoloGene processing uses proteins from input organisms to compare and sequence homologs, mapping back to corresponding DNA sequences. Reports include homology and phenotype information drawn from Online Mendelian Inheritance in Man, Mouse Genome Informatics, Zebrafish Information Network, Saccharomyces Genome Database and FlyBase. | homolog, paralog, ortholog, genome, gene, protein, protein alignment, phenotype, conserved domain, homology, amino acid sequence, cell, dna, gold standard |
is used by: NIF Data Federation is used by: Nowomics is used by: MitoMiner is listed by: OMICtools is listed by: re3data.org is related to: OMIM is related to: Mouse Genome Informatics (MGI) is related to: Zebrafish Information Network (ZFIN) is related to: SGD is related to: FlyBase is related to: ProbeMatchDB 2.0 is related to: Biomine is related to: Consensus CDS has parent organization: NCBI |
PMID:23193264 | Free, Freely availalbe | nif-0000-02975, r3d100010781, OMICS_01544 | http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=homologene, https://doi.org/10.17616/R3889F | SCR_002924 | NCBI HomoloGene | 2026-08-08 12:03:42 | 459 | |||||
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MapViewer Resource Report Resource Website 100+ mentions |
MapViewer (RRID:SCR_003092) | Map Viewer | database, data or information resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on January 4, 2023. Database that provides special browsing capabilities for a subset of organisms in Entrez Genomes. Map Viewer allows users to view and search an organism's complete genome, display chromosome maps, and zoom into progressively greater levels of detail, down to the sequence data for a region of interest. If multiple maps are available for a chromosome, it displays them aligned to each other based on shared marker and gene names, and, for the sequence maps, based on a common sequence coordinate system. | genome, mapping, sequencing, chromosome |
is listed by: OMICtools is related to: NCBI Genome is related to: Consensus CDS has parent organization: NCBI |
THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_00921, nif-0000-03103 | SCR_003092 | Entrez Map Viewer, NCBI Map Viewer | 2026-08-08 12:03:55 | 244 | |||||||
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e-PCR Resource Report Resource Website 10+ mentions |
e-PCR (RRID:SCR_003082) | e-PCR | analysis service resource, data analysis service, production service resource, service resource | Web tool that identifies sequence tagged sites (STSs) within DNA sequences. Using e-PCR, you can search for sub-sequences that closely match the PCR primers and have the correct order, orientation, and spacing. The software may also be downloaded to run locally. | sequence tagged site, dna sequence, reverse, forward |
is listed by: OMICtools is listed by: Debian has parent organization: NCBI |
PMID:15215361 PMID:9149949 |
THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_02345 | https://sources.debian.org/src/ncbi-epcr/ | http://www.ncbi.nlm.nih.gov/sutils/e-pcr | SCR_003082 | Electronic PCR, Electronic PCR (e-PCR) | 2026-08-08 12:03:50 | 13 | ||||
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Type-III-Secretion-System related database Resource Report Resource Website |
Type-III-Secretion-System related database (RRID:SCR_002941) | T3DB | database, data or information resource | Database aimed to annotate all bacterial Type III Secretion System (T3SS) related structure, effector, regulator, and auxiliary genes. | type iii secretion system, gene, protein, ortholog |
is listed by: OMICtools has parent organization: Chinese University of Hong Kong; Hong Kong; China |
PMID:22545727 | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_05160 | SCR_002941 | T3SS-related Database | 2026-08-08 12:03:50 | 0 | ||||||
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PlantProm DB Resource Report Resource Website 1+ mentions |
PlantProm DB (RRID:SCR_003359) | PlantProm | database, data or information resource | Annotated, non-redundant database of proximal promoter sequences for RNA polymerase II with experimentally determined transcription start site(s) (TSS) from various plant species. It contains 578 unrelated entries including 151, 396 and 31 promoters with experimentally verified TSS from monocot, dicot and other plants, respectively (April 2014). This DB presents the published promoter sequences with TSS(s) determined by direct experimental approaches and therefore serves as the most accurate source for development of computational promoter prediction tools. | proximal promoter sequence, rna polymerase ii, transcription start site, promoter, monocot, dicot, dna sequence, taxonomy, promoter type, nucleotide frequency matrix, nucleotide composition, motif, transcription, regulatory element |
is listed by: OMICtools has parent organization: University of London; London; United Kingdom |
Pakistan European Union | PMID:12519961 | Free, Available for download, Freely available | nif-0000-03308, OMICS_01875 | http://www.softberry.com/berry.phtml?topic=plantprom&group=data&subgroup=plantprom | http://mendel.cs.rhul.ac.uk/mendel.php?topic=plantprom | SCR_003359 | Plant Promoter Database, PlantProm DB | 2026-08-08 12:03:43 | 8 | |||
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PPDB: Plant Promoter Database Resource Report Resource Website |
PPDB: Plant Promoter Database (RRID:SCR_003395) | PPDB | database, data or information resource | A plant promoter database that provides information on transcription start sites (TSSs), core promoter structure and regulatory element groups (REGs) as putative and comprehensive transcriptional regulatory elements. Microarray data-based predictions have been appended as REG annotations which inform their putative physiological roles. | gene, transcription start site, promoter structure, promoter, regulatory element group, homolog |
is listed by: OMICtools has parent organization: Gifu University; Gifu; Japan |
Japanese Ministry of Education Culture Sports Science and Technology MEXT | PMID:24194597 PMID:17947329 |
Free, Available for download, Freely available | nif-0000-03329, OMICS_01874 | http://ppdb.gene.nagoya-u.ac.jp/cgi-bin/index.cgi | SCR_003395 | Plant Promoter Database | 2026-08-08 12:03:43 | 0 | ||||
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NYCE Resource Report Resource Website |
NYCE (RRID:SCR_003144) | NYCE | analysis service resource, data analysis service, production service resource, service resource | Data analysis service that predicts subcellular location (either Nuclear, Nucleo-cytoplasmic, Cytoplasmic or Extracellular) of eukaryotic proteins using the predicted exposure value of their amino acids. | subcellular localization, protein, amino acid, eukaryote |
is listed by: OMICtools has parent organization: Max Delbruck Center for Molecular Medicine; Berlin; Germany |
PMID:24283794 | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_01630 | SCR_003144 | 2026-08-08 12:03:51 | 0 | |||||||
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Babelomics Resource Report Resource Website 100+ mentions |
Babelomics (RRID:SCR_002969) | Babelomics | analysis service resource, data analysis service, production service resource, service resource | An integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling. Version 4 of Babelomics integrates primary (normalization, calls, etc.) and secondary (signatures, predictors, associations, TDTs, clustering, etc.) analysis tools within an environment that allows relating genomic data and/or interpreting them by means of different functional enrichment or gene set methods. Such interpretation is made not only using functional definitions (GO, KEGG, Biocarta, etc.) but also regulatory information (from Transfac, Jaspar, etc.) and other levels of regulation such as miRNA-mediated interference, protein-protein interactions, text-mining module definitions and the possibility of producing de novo annotations through the Blast2GO system . Babelomics has been extensively re-engineered and now it includes the use of web services and Web 2.0 technology features, a new user interface with persistent sessions and a new extended database of gene identifiers. In this release GEPAS and Babelomics have integrated into a unique web application with many new features and improvements: * Data input: import and quality control for the most common microarray formats * Normalization and base calling: for the most common expression, tiling and SNP microarrays (Affymetrix and Agilent). * Transcriptomics: diverse analysis options that include well established as well as novel algorithms for normalization, gene selection, class prediction, clustering and time-series analysis. * Genotyping: stratification analysis, association, TDT. * Functional profiling: functional enrichment and gene set enrichment analysis with functional terms (GO, KEGG, Biocarta, etc.), regulatory (Transfac, Jaspar, miRNAs, etc.), text-mining, derived bioentities, protein-protein interaction analysis. * Integrative analysis: Different variables can be related to each other (e.g. gene expression to gnomic copy number) and the results subjected to functional analysis. Platform: Online tool | platform, analysis, transcriptomics, proteomics, genomics, normalization, clustering, gene, mirna, protein, interaction, text mining, genotyping, bioentity, functional profiling, statistical analysis, functional annotation, regulatory motif, microarray, fatigo, biclustering, networkminer, gepas, gene expression, FASEB list |
is listed by: OMICtools is listed by: Gene Ontology Tools is related to: Gene Ontology is related to: BioCarta Pathways is related to: KEGG is related to: TRANSFAC is related to: JASPAR has parent organization: CIPF Bioinformatics and Genomics Department |
Spanish Ministry of Science and Innovation BIO2008-04212; Spanish Ministry of Science and Innovation CEN-2008-1002; Red Temtica de Investigacion Cooperativa en Cancer RD06/0020/1019; Instituto de Salud Carlos III |
PMID:20478823 PMID:18515841 PMID:16845052 PMID:14990455 PMID:15980512 PMID:17478504 |
Free for academic use, Account required | OMICS_00748, nif-0000-30144 | http://www.fatigo.org/, http://www.gepas.org/, http://babelomics3.bioinfo.cipf.es | http://www.babelomics.org | SCR_002969 | Babelomics 4: Gene Expression and Functional Profiling Analysis Suite, Babelomics 4 | 2026-08-08 12:03:42 | 138 | |||
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ResponseNet Resource Report Resource Website 1+ mentions |
ResponseNet (RRID:SCR_003176) | ResponseNet | analysis service resource, data analysis service, production service resource, service resource | WebServer that identifies high-probability signaling and regulatory paths that connect input data sets. The input includes two weighted lists of condition-related proteins and genes, such as a set of disease-associated proteins and a set of differentially expressed disease genes, and a molecular interaction network (i.e., interactome). The output is a sparse, high-probability interactome sub-network connecting the two sets that is biased toward signaling pathways. This sub-network exposes additional proteins that are potentially involved in the studied condition and their likely modes of action. Computationally, it is formulated as a minimum-cost flow optimization problem that is solved using linear programming. | interactome, gene, protein, signaling pathway, signaling, regulatory, pathway, regulatory pathway, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian has parent organization: Ben-Gurion University of the Negev; Beer-Sheva; Israel |
PMID:23761447 PMID:21576238 |
Free, Freely available | biotools:responsenet, OMICS_01562 | https://bio.tools/responsenet | http://netbio.bgu.ac.il/respnet/ | SCR_003176 | 2026-08-08 12:03:43 | 4 | |||||
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iLoc-Animal Resource Report Resource Website 1+ mentions |
iLoc-Animal (RRID:SCR_003173) | iLoc-Animal | analysis service resource, data analysis service, production service resource, service resource | Data analysis service for predicting subcellular localization of animal proteins with single or multiple sites. | subcellular localization, animal, protein | is listed by: OMICtools | PMID:23370050 | Free, Freely available | OMICS_01623 | https://pubs.rsc.org/en/content/articlelanding/2013/mb/c3mb25466f | SCR_003173 | iLoc-Animal: Predicting subcellular localization of animal proteins with single or multiple sites | 2026-08-08 12:03:55 | 6 | |||||
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Hapmix Resource Report Resource Website 50+ mentions |
Hapmix (RRID:SCR_004203) | HAPMIX | software resource, software application, source code | Software application that uses genotyping data from SNP arrays for accurately inferring chromosomal segments of distinct continental ancestry in admixed populations, using dense genetic data. (entry from Genetic Analysis Software) | gene, genetic, genomic, admixed, population, genotype, single nucleotide polymorphism, ancestry, chromosomal segment, snp array |
is listed by: OMICtools is listed by: Genetic Analysis Software has parent organization: Harvard Medical School; Massachusetts; USA |
NHGRI U01-HG004168; NHLBI R01-HL087699 |
PMID:19543370 | Restricted | nlx_22768, OMICS_02082 | http://www.hsph.harvard.edu/faculty/alkes-price/software/, http://www.stats.ox.ac.uk/~myers/software.html, https://reich.hms.harvard.edu/software | http://genetics.med.harvard.edu/reich/Reich_Lab/Software.html | SCR_004203 | 2026-08-08 12:03:57 | 52 |
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