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http://www.flywings.org.uk/morphoj_page.htm
Software package written in Java for geometric morphometric analysis for two- and three-dimensional landmark data. Offers user-friendly environment for standard multivariate analyses such as principal components, discriminant analysis and multivariate regression as well as specialized applications including phylogenetics, quantitative genetics and analyses of modularity in shape data.
Proper citation: MorphoJ (RRID:SCR_016483) Copy
https://dormed.gr/en/product/monica-an24/
Monitors the electrical signals on the patient’s abdomen by using the abdominal fECG and mECG wave shape to uniquely identify and separate the maternal and fetal heart rates.
Proper citation: Dormed Hellas: Monica AN24 (RRID:SCR_016455) Copy
https://www.ncbi.nlm.nih.gov/biocollections
Registry of bio-collections linked to genomes. Collection of curated dataset of metadata for culture collections, museums, herbaria and other natural history collections, including Darwin Core institution and collection codes, and URL formulae for mapping specimen ids to web pages at the collection site.
Proper citation: NCBI Biocollections (RRID:SCR_016459) Copy
Repository of microbial in Canada. Culture collection, preservation, analysis, identification of fungi living strains. Backed up by herbarium dried colonies. A reference and training centre for the identification of human and animal pathogens and allied taxa.Provides advice or assistance to projects involving fungi.
Proper citation: UAMH Centre for Global Microfungal Biodiversity (RRID:SCR_016466) Copy
Center that collects, deposits, maintains bacteria and fungi, and facilitates microbiological research to advance agricultural production, food safety, public health, and economic development. Housed within the Mycotoxin Prevention and Applied Microbiology Research Unit at the National Center for Agricultural Utilization Research in Peoria, Illinois.
Proper citation: NRRL ARS Culture Collection (RRID:SCR_016465) Copy
https://genome.jgi.doe.gov/programs/fungi/1000fungalgenomes.jsf
Web application to provide genomic information for fungi. Includes sequenced fungal genomes, those in progress, and selected nominations. Nomination of new species for genome sequencing in the families or only one reference genome possible after providing DNA/RNA samples for their sequencing. Used to explore the diversity of fungi important for energy and the environment.
Proper citation: 1000 Fungal Genome Project (RRID:SCR_016463) Copy
https://github.com/WGS-TB/MentaLiST
Software for a MLST (multi-locus sequence typing) caller, based on a k-mer counting algorithm and written in the Julia language. Designed and implemented to handle large typing schemes.
Proper citation: MentaLiST (RRID:SCR_016469) Copy
Software to process cryo-EM images of macromolecular complexes and obtain high-resolution 3D reconstructions from them.
Proper citation: cisTEM (RRID:SCR_016502) Copy
https://www.mrc-lmb.cam.ac.uk/kzhang/Gctf/
Software tool as a Graphics Processing Units (GPU) accelerated computer program for real-time contrast transfer function (CTF) determination and correction. Used for a near-atomic resolution cryo electron microscopy (cryoEM) reconstruction to maximize the cross-correlation of a simulated CTF with the logarithmic amplitude spectra (LAS) of observed micrographs after background subtraction., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.
Proper citation: GCTF (RRID:SCR_016500) Copy
Microbial stock center. Collaborative platform for the pan-European research infrastructure for microbial resources. Provides access to microorganisms, their derivatives, associated data and services for research, development and application.
Proper citation: MIRRI (RRID:SCR_016461) Copy
Database and information retrieval, analysis, and visualization system for microbial resources to help culture collections to manage, disseminate and share the information related to their holdings. Provides an interface for the scientific and industrial communities to access the microbial resource information.
Proper citation: Global Catalogue of Microorganisms (RRID:SCR_016460) Copy
Research university and a member of China's elite C9 League. HIT is a Chinese Ministry of Education Class A Double First Class University.
Proper citation: Harbin Institute of Technology; Harbin; China (RRID:SCR_011263) Copy
Graduate medical school of Harvard University and is located in the Longwood Medical Area of Boston, Massachusetts.
Proper citation: Harvard Medical School; Massachusetts; USA (RRID:SCR_011267) Copy
A large multidisciplinary world leader in genomic research with locations in Rockville, Maryland and San Diego, California. It was formed through the merger of several affiliated and legacy organizations - The Institute for Genomic Research (TIGR) and The Center for the Advancement of Genomics (TCAG), The J. Craig Venter Science Foundation, The Joint Technology Center, and the Institute for Biological Energy Alternatives (IBEA).
Proper citation: J. Craig Venter Institute (RRID:SCR_011269) Copy
Public research university in Pocatello, Idaho. Founded in 1901 as the Academy of Idaho, ISU offers more than 280 programs at its main campus and at locations in Meridian, Idaho Falls, and Twin Falls. It is the state's designated lead institution in health professions and medical education.
Proper citation: Idaho State University; Idaho; USA (RRID:SCR_011271) Copy
http://www.charite.de/en/charite/
One of Europe's largest university hospitals, affiliated with Humboldt University and Free University Berlin. With numerous Collaborative Research Centres of the German Research Foundation it is one of Germany's most research-intensive medical institutions.
Proper citation: Charite - Universitatsmedizin Berlin; Berlin; Germany (RRID:SCR_011151) Copy
Private research university in Worcester, Massachusetts. Founded in 1887 with a large endowment from its namesake Jonas Gilman Clark, a prominent businessman, Clark was one of the first modern research universities in the United States.
Proper citation: Clark University; Massachusetts; USA (RRID:SCR_011157) Copy
http://www.milkeninstitute.org/
Nonprofit, nonpartisan think tank that helps people build meaningful lives. Center for Regional Economics and California Center.
Proper citation: Milken Institute; California; USA (RRID:SCR_011243) Copy
Public research university in Berlin, Germany. The Free University of Berlin is one of eleven elite German research universities in the German Universities Excellence Initiative.
Proper citation: Free University of Berlin; Berlin; Germany (RRID:SCR_011246) Copy
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