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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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OpenMonkeyStudio project Resource Report Resource Website |
OpenMonkeyStudio project (RRID:SCR_021409) | instrument resource, portal, data or information resource, project portal | Project for tracking interactions among freely moving monkeys.System includes integrated hardware and software for pose tracking in freely moving rhesus macaques. | Pose tracking, non human primates, motion capture system, 3D pose, freely moving macaques, interactions among freely moving monkeys, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1038/s41467-020-18441-5 | Free, Freely available | SCR_021409 | OpenMonkeyStudio | 2026-08-04 09:44:48 | 0 | ||||||||
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Rodent Arena Tracker project Resource Report Resource Website |
Rodent Arena Tracker project (RRID:SCR_021408) | RAT | instrument resource, portal, data or information resource, project portal | Project related to rodent tracking and task control.Provides closed loop system for machine vision rodent tracking and task control created by scientist from Washington University. System to track and report mouse activity while they are contained in simple arena. System uses OpenMV M7 microcontroller to acquire images of arena and process them in real-time to report mouse centroid data to text file. Wireless position tracker for automatically tracking mice in high contrast arenas. | Wireless position tracker, automatically tracking mice, positional behavior data, OpenMV M7 microcontroller, acquire arena images, mouse movement, OpenMV Cam M7 hardware, OpenBehavior, instrument, equipment, USEDit, Instrument |
is listed by: OpenBehavior has parent organization: Washington University in St. Louis; Missouri; USA |
DOI:10.1523/eneuro.0485-19.2020 | Free, Freely available | SCR_021408 | Rodent Arena Tracker | 2026-08-04 09:44:48 | 0 | |||||||
|
NeRD Resource Report Resource Website |
NeRD (RRID:SCR_021582) | instrument resource, portal, data or information resource, project portal | Portal provides open source neural recording device for wireless transmission of local field potential data in freely behaving animals. Used for electrophysiological recording of local field potentials in freely behaving animals. | Instrument, neural recording device, wireless transmission, local field potential data, freely behaving animals, OpenBehavior | is listed by: OpenBehavior | Free, Freely available | SCR_021582 | Neural Recording Device | 2026-08-04 09:44:51 | 0 | |||||||||
|
NINscope Resource Report Resource Website |
NINscope (RRID:SCR_021577) | instrument resource, portal, data or information resource, project portal | Portal provides miniscope for fluorescence imaging and optogenetic stimulation. Used for monitoring of neural signals during unrestrained behavior. | Instrument, miniaturized fluorescent microscope, miniscope, monitoring of neural signals, unrestrained behavior, OpenBehavior |
is listed by: OpenBehavior is related to: NINscope software |
DOI:10.7554/elife.49987 | Free, Freely available | SCR_021577 | 2026-08-04 09:44:52 | 0 | |||||||||
|
3D Printed Headcap and Microdrive Resource Report Resource Website |
3D Printed Headcap and Microdrive (RRID:SCR_021595) | instrument resource, portal, data or information resource, project portal | Portal provides novel head cap and microdrive design for chronic multi electrode recordings in rats through use of 3D printing technology. Head cap and microdrive designs can be fabricated at little cost using consumer grade 3D printers. | Instrument, head cap, microdrive, chronic multi electrode recordings, rat, 3D printing OpenBehavior | is listed by: OpenBehavior | DOI:10.1152/jn.00955.2014 | Free, Freely available | SCR_021595 | 2026-08-04 09:44:52 | 0 | |||||||||
|
A Head Mounted Multi Camera System for Freely Moving Mice project Resource Report Resource Website |
A Head Mounted Multi Camera System for Freely Moving Mice project (RRID:SCR_021591) | instrument resource, portal, data or information resource, project portal | Portal provides system of two multi camera head mounts for mice in order to record physiological changes in certain behaviors. System used for video tracking of rodents behavior. | Instrument, multi camera head mounts, mice head mounts, record physiological changes, OpenBehavior | is listed by: OpenBehavior | DOI:10.3389/fnins.2020.592417 | Free, Freely available | SCR_021591 | A Head Mounted Multi Camera System for Freely Moving Mice | 2026-08-04 09:44:50 | 0 | ||||||||
|
Microwave based Homecage Motion Detector project Resource Report Resource Website |
Microwave based Homecage Motion Detector project (RRID:SCR_021590) | instrument resource, portal, data or information resource, project portal | Portal provides radar based motion detector for home cage activity monitoring in mice. System is used for motion detection without visual contact to animal and can be used with various cage types. Features custom printed circuit board and motion detector shield for Arduino, which saves raw activity and timestamped data in CSV files onto SD card.Developed by Max Planck Institute of Psychiatry scientists. Authors also provide Python script for data analysis and generation of actograms. | Instrument, Homecage Motion Detector, OpenBehavior |
is listed by: OpenBehavior has parent organization: Max-Planck-Gesellschaft |
DOI:10.1186/s13036-017-0079-y | Free, Freely available | SCR_021590 | Microwave based Homecage Motion Detector | 2026-08-04 09:44:52 | 0 | ||||||||
|
An Opensource lickometer and microstructure analysis program Resource Report Resource Website |
An Opensource lickometer and microstructure analysis program (RRID:SCR_021589) | instrument resource, portal, data or information resource, project portal | Portal provides open source lickometer that utilizes readily available or customizable components such as PC sound card and 3D printed drinking bottle holder. System consists of apparatus itself and open source software to collect and analyze data. Recording of raw data is handled by Audacity, open source audio program. | Instrument, ingestion behaviors in rodents, lickometer, OpenBehavior | is listed by: OpenBehavior | DOI:10.1016/j.ohx.2018.e00035 | Free, Freely available | SCR_021589 | 2026-08-04 09:44:52 | 0 | |||||||||
|
PRiED Resource Report Resource Website |
PRiED (RRID:SCR_021586) | instrument resource, portal, data or information resource, project portal | Portal provides open Source 3-D Printed Modular micro drive system for acute primate neurophysiology. | Instrument, 3D Printed Modular micro drive system, acute primate neurophysiology, OpenBehavior |
is listed by: OpenBehavior has parent organization: Boston University School of Medicine; Massachusetts; USA |
DOI:10.1371/journal.pone.0094262 | Free, Freely available | SCR_021586 | 2026-08-04 09:44:52 | 0 | |||||||||
|
Modular Automated Platform for Large Scale Experiments project Resource Report Resource Website 10+ mentions |
Modular Automated Platform for Large Scale Experiments project (RRID:SCR_021557) | MAPLE | instrument resource, portal, data or information resource, project portal | Portal related to measurement of fly social networks and behavior. Provides Drosophila handing robot that boasts modular design, allowing platform to both automate diverse phenotyping assays and aid with lab chores (e.g., collecting virgin female flies). MAPLE permits small part manipulator, USB digital camera, and fly manipulator to work simultaneously over platform of flies. | Instrument, Drosophila handing robot, automate diverse phenotyping assays, collecting virgin female flies, USB digital camera, fly manipulator, flies modular automated platform, large scale experiments, OpenBehavior |
is listed by: OpenBehavior is related to: Modular Automated Platform for Large Scale Experiments |
DOI:10.1101/239459 | Free, Freely available | SCR_021557 | Modular Automated Platform for Large -Scale Experiments | 2026-08-04 09:44:50 | 41 | |||||||
|
ArControl project Resource Report Resource Website |
ArControl project (RRID:SCR_021556) | instrument resource, portal, data or information resource, project portal | Portal related to delivering stimuli and monitoring responses. Provided behavioral platform was developed by scientists from Huazhong University of Science and Technology, Wuhan, China. System uses Arduino UNO board and simple drive circuit along with stand-along GUI application. Experimental data is automatically recorded with built-in data acquisition function and entire behavioral schedule is stored within Arduino chip. | Instrument, behavioral platform, delivering stimuli, monitoring responses, OpenBehavior |
is listed by: OpenBehavior is related to: ArControl |
DOI:10.3389/fnbeh.2017.00244 | Free, Freely available | SCR_021556 | ArtControl, Arduino Control Platform | 2026-08-04 09:44:51 | 0 | ||||||||
|
SnackClock Resource Report Resource Website |
SnackClock (RRID:SCR_021554) | instrument resource, portal, data or information resource, project portal | Project related to feeding behavior.Provides device for dispensing pre-measured quantities of food at regular intervals throughout day. Device uses 24 hour clock movement to rotate dispenser wheel one revolution per day. | Instrument, feeding behavior, dispensing pre-measured food quantities device, regular interval feeding, OpenBehavior |
is listed by: OpenBehavior has parent organization: Washington University in St. Louis; Missouri; USA |
Free, Freely available | SCR_021554 | 2026-08-04 09:44:50 | 0 | ||||||||||
|
Automated Home-Cage Functional Imaging project Resource Report Resource Website |
Automated Home-Cage Functional Imaging project (RRID:SCR_021567) | instrument resource, portal, data or information resource, project portal | Portal provides automated system for mesoscopic functional imaging that allows subjects to self initiate head fixation and imaging within home cage. Developed by University of British Columbia scientists. System for automated head fixation within mouse home cages. | Instrument, mesoscopic functional imaging, self initiate head fixation, imaging within home cage, OpenBehavior |
is listed by: OpenBehavior is related to: Automated Home-Cage Functional Imaging has parent organization: University of British Columbia; British Columbia; Canada |
DOI:10.1038/ncomms11611 | Free, Freely available | SCR_021567 | Automated Home-Cage Functional Imaging system | 2026-08-04 09:44:51 | 0 | ||||||||
|
Touchscreen Cognition Resource Report Resource Website |
Touchscreen Cognition (RRID:SCR_021550) | instrument resource, portal, data or information resource, project portal | Project related to cognitive testing method for rodents.Provides touchscreen operant platform for testing learning and memory in rats and mice.Includes device chambers that can be used to measure rodent behavior.Not open source device. | Cognitive testing, rodent, touchscreen operant platform, learning testing, memory testing, rat, mice, device chamber, measure rodent behavior, OpenBehavior | is listed by: OpenBehavior | Free, Freely available | SCR_021550 | 2026-08-04 09:44:51 | 0 | ||||||||||
|
ACRoBaT Resource Report Resource Website |
ACRoBaT (RRID:SCR_021546) | instrument resource, portal, data or information resource, project portal | Project related to studying motor behavior. University of Washington in Seattle scientists have developed and published their device for training rats to perform modified center out task. | Instrument, automated device, training rats, perform modified center out task, OpenBehavior |
is listed by: OpenBehavior has parent organization: University of Washington; Seattle; USA |
DOI:10.1016/j.bbr.2017.11.031 | Free, Freely available | SCR_021546 | Automated Center out Rodent Behavioral Trainer | 2026-08-04 09:44:51 | 0 | ||||||||
|
Visual stimulator with customizable light spectra Resource Report Resource Website |
Visual stimulator with customizable light spectra (RRID:SCR_021545) | instrument resource, portal, data or information resource, project portal | Project related to visual neuroscience.Provides spatial visual stimulator with arbitrary spectrum of light for visual neuroscientists.Open source, low cost visual stimulator which can be customized with up to 6 chromatic channels. Spectrum of light can be arbitrary and customizable to be adapted to different animal models based on their visual spectrum. Device details, including parts list and information for custom python library for generating visual stimuli (QDSpy), can be found in eLife publication. | Instrument, Visual stimulator, spatial visual stimulator, spectrum of light, visual neuroscience, OpenBehavior | is listed by: OpenBehavior | DOI:10.7554/elife.48779 | Commercially available | SCR_021545 | 2026-08-04 09:44:51 | 0 | |||||||||
|
Pypreclin Resource Report Resource Website 1+ mentions |
Pypreclin (RRID:SCR_021526) | data processing software, software application, image processing software, software resource | Software Python tool to processes raw macaque fMRI images using algorithms embedded in automatic pipeline. | Raw macaque fMRI images, fMRI images, macaque images, Python, OpenBehavior |
is listed by: OpenBehavior is related to: Pypreclin project |
DOI:10.1016/j.neuroimage.2019.116353 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/pypreclin/ | SCR_021526 | 2026-08-04 09:44:49 | 5 | ||||||||
|
Oculomatic Resource Report Resource Website |
Oculomatic (RRID:SCR_021525) | data processing software, software application, software resource, data acquisition software | Software tool for high speed eye tracking for Point Gray USB3.0 cameras.Oculomatic software tracks eye position within acquired image frame at frame rate dictated by image sensor. | High speed eye tracking, Point Gray USB3.0 camera, Oculomatic Eye Tracking system, track eye movements, OpenBehavior |
is listed by: OpenBehavior is related to: Oculomatic Eye Tracking project |
DOI:10.1016/j.jneumeth.2016.06.016 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/oculomatic-eye-tracking/ | SCR_021525 | Oculomatic eye tracking | 2026-08-04 09:44:50 | 0 | |||||||
|
Pathfinder Resource Report Resource Website 100+ mentions |
Pathfinder (RRID:SCR_021520) | data processing software, software application, software resource, data analysis software | Open source software for analyzing spatial navigation search strategies. | Analyzing spatial navigation search strategies, spatial navigation, search strategies, OpenBehavior |
is listed by: OpenBehavior is related to: Pathfinder project |
DOI:10.1101/715961 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/pathfinder/ | SCR_021520 | 2026-08-04 09:44:49 | 225 | ||||||||
|
Wave Surfer Resource Report Resource Website 10+ mentions |
Wave Surfer (RRID:SCR_021529) | data processing software, data analysis software, software resource, software application, data acquisition software | Open source software application for neurophysiology data acquisition and analysis. Program is based in MatLab, and evolved from earlier open source software package called Ephus. | neurophysiology data acquisition, neurophysiology data analysis, neurophysiology data, MATLAB, OpenBehavior |
is listed by: OpenBehavior is related to: Wave Surfer project |
Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/wave-surfer/ | SCR_021529 | 2026-08-04 09:44:49 | 46 |
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