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https://login.scg.stanford.edu
High-performance computing facility. Its resources have been designed to support labs engaged in genetics and bioinformatics research, but are open to anyone on campus. The Stanford SCG Bioinformatics Cluster is optimized to support large memory, single-node threaded applications as well as applications and workflows that require many small files.
Proper citation: Stanford SCG Bioinformatics Cluster (RRID:SCR_026876) Copy
Sanofi-Aventis was the former name of the French multinational pharmaceutical and healthcare company Sanofi, now headquartered in Paris, France. Sanofi S.A. is global healthcare company focused on discovering, developing, and delivering medicines and vaccines.
Proper citation: Sanofi-Aventis (RRID:SCR_026909) Copy
System used for in vivo radiation therapy and imaging of in vivo radiation therapy and imaging, like mice and rats, in order to study tumor and normal tissue responses to radiation. It combines micro-CT imaging with conformal radiation delivery, allowing researchers to image small tumors and organs, then precisely deliver radiation therapy with sub-millimeter accuracy.
Proper citation: Xstrahl: Small Animal Radiation Research Platform (SARRP) system (RRID:SCR_026901) Copy
Bench-standing IHC/ISH stainer with three-tray system, with 3.5hour run times. Each tray functions independently, allowing on-demand access and enabling you to load slides as they become available. System accommodates up to 29 antibodies (with detection loaded) and allows for easy swapping of antibodies without interrupting ongoing staining processes.
Proper citation: Leica: BOND-MAX Fully Automated IHC and ISH Staining System (RRID:SCR_026887) Copy
Database compiles various types of data and information from literature and generalist databases on human TP53 gene variations related to cancer.
Proper citation: TP53 Database (RRID:SCR_026878) Copy
https://www.revvity.com/gb-en/product/labchip-gx-touch-24-cls138162
Automated microfluidic electrophoresis system that rapidly quantifies and sizes DNA and RNA with high sensitivity using minimal sample volume.
Proper citation: Revvity: LabChip GX Touch Nucleic Acid Analyzer (RRID:SCR_026830) Copy
https://www.covaris.com/le220-plus-focused-ultrasonicator-500569
Ultrasonicator is scalable, automated high-performance sample preparation instrument with automated water works to optimize user-to-user reproducibility and remote set-up and scheduling. Designed for integration with high-throughput laboratory automation. Includes integrated AFA ultraCUBE water chiller and water conditioning module.
Proper citation: Covaris: LE220-plus Focused-ultrasonicator (RRID:SCR_026895) Copy
Immunohistochemistry stainer is united with software and connectivity options. Can process 48 slides in less than three hours.
Proper citation: Agilent: Dako Autostainer Link 48 (RRID:SCR_026889) Copy
Biotechnology company in San Diego, California. Provides life scientists with innovative research reagents including immunity and cell culture products.
Proper citation: InvivoGen (RRID:SCR_026997) Copy
Web platform that integrates multiple programming language environments and enables data processing, data analysis, and machine learning through visual interface.
Proper citation: DecisionLinnc Data Science Platform (RRID:SCR_026971) Copy
https://www.bruker.com/en/products-and-solutions/mass-spectrometry/lc-ms/nanoelute-2.html
High-performance nanoflow liquid chromatography system with intuitive and flexible user interface, covering broad range of applications from single cell to high throughput routine proteomics.
Proper citation: Bruker: nanoElute 2 (RRID:SCR_026972) Copy
https://www.berthold.com/en/bioanalytic/products/microplate-readers/luminescence/centro-lb963/
Instrument for luminescence applications.
Proper citation: Berthold: Centro LB 960 Microplate Luminometer (RRID:SCR_026977) Copy
System provides peak performance for nanoflow applications up to 1200 bar. Dual in-line flow sensors before solvent mixing give excellent gradient precision. Its intuitive software facilitates rapid method setup and immediate system control.
Proper citation: Thermo Fisher: EASY-nLC 1200 System (RRID:SCR_026978) Copy
https://www.thermofisher.com/order/catalog/product/BRE725533?SID=srch-hj-BRE725533
Orbitrap LC-MS with EASY-IC (Internal Calibration) mass spectrometer for high-resolution, accurate mass analysis of complex samples, providing detailed information about compounds for identification, quantification, and characterization. Liquid Chromatography-Mass Spectrometry combines the separation power of liquid chromatography with the mass analysis capabilities of mass spectrometer. Orbitrap mass analyzer offers high resolution and accuracy, enabling the separation and identification of even closely related compounds. Internal Calibration uses internally generated ions to improve mass accuracy.
Proper citation: Thermo Fisher: Orbitrap Exploris 480 Mass Spectrometer (RRID:SCR_027000) Copy
https://ubuntu.com/desktop/wsl
Ubuntu terminal environment on Windows with Windows Subsystem for Linux (WSL). Used to streamline web application development, leverage cutting-edge AI/ML tooling, develop cross-platform applications and manage IT infrastructure without leaving Windows.
Proper citation: Ubuntu on WSL (RRID:SCR_026948) Copy
https://apps.cytoscape.org/apps/yfileslayoutalgorithms
Software suite of algorithms used for arranging and visualizing graph structures. They provide variety of layout styles, such as hierarchical, organic, tree, circular, and orthogonal, each optimizing for different criteria and visualization needs.
Proper citation: yFiles Layout Algorithms (RRID:SCR_026961) Copy
https://www.microscope.healthcare.nikon.com/products/inverted-microscopes/eclipse-ts2r
Compact inverted research microscope configurable with wide variety of observation methods such as epi-fluorescence, phase contrast, DIC, and more. The Ts2R features camera port for digital imaging while maintaining compact body.
Proper citation: Nikon: ECLIPSE Ts2R inverted microscope (RRID:SCR_027146) Copy
https://www.mybeckman.ca/flow-cytometry/research-flow-cytometers/cytoflex-lx/c40313
Flow Cytometer has 5 active lasers (375 nm, 405 nm, 488 nm, 561 nm, 638 nm) and 19 channels for fluorescence detection. This instrument can be upgraded with a maximum of 3 Near UV, 5 Violet, 3 Blue, 3 Red, and 2 Infrared channels. It includes 21 repositionable bandpass filters, 405/10, 450/45 (2), 525/40 (3), 585/42, 610/20 (3), 660/10 (2), 675/30 (2), 690/50, 710/50, 712/25, 763/43 (3), 840/20, 885/40. The complete system is supplied with computer work station with CytExpert Acquisition software, sheath and waste containers with harness.
Proper citation: Beckman Coulter: CytoFLEX LX N3-V5-B3-Y5-R3-I0 Flow Cytometer (RRID:SCR_027084) Copy
https://opendata.cbs.nl/#/CBS/nl/dataset/85457NED
Database of Statistics Netherlands (CBS). Contains lifestyle data of Dutch population living in private households. The numbers can be broken down by various personal characteristics.
Proper citation: CBS StatLine - Lifestyle (RRID:SCR_027121) Copy
https://www.bruker.com/en/products-and-solutions/mass-spectrometry/mrms/solarix.html
Bruker solariX is magnetic resonance mass spectrometry (MRMS) platform, available with high-field magnets ranging from 7 T up to 15 T.
Proper citation: Bruker: solariX (RRID:SCR_027095) Copy
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