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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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LaVision: BioTec UltraMicroscope II Resource Report Resource Website 1+ mentions |
LaVision: BioTec UltraMicroscope II (RRID:SCR_027238) | instrument resource | Light sheet fluorescence microscope designed for high-resolution, three-dimensional imaging of large, cleared, and fluorescently labeled biological samples. It excels at visualizing entire biological systems like organs, embryos, or even small animals with cellular resolution, making it suitable for studying complex biological structures and processes. | Light sheet microscopy, Miltenyi Biotech, imaging of large 3D biological samples, 3D imaging, | is used by: Icahn School of Medicine at Mount Sinai Microscopy and Advanced Bioimaging Core Facility | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_027238.pdf | Model_Number_UltraMicroscope II | SCR_027238 | 2026-08-08 12:07:58 | 1 | |||||||||
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Thermo Fisher: Orbitrap Ascend MultiOmics Tribrid Mass Spectrometer Resource Report Resource Website |
Thermo Fisher: Orbitrap Ascend MultiOmics Tribrid Mass Spectrometer (RRID:SCR_027321) | instrument resource | High-resolution mass spectrometer designed for comprehensive multiomics research. It combines a high-performance Orbitrap mass analyzer with a tribrid architecture (quadrupole, linear ion trap, and Orbitrap) for enhanced ion separation, fragmentation, and detection capabilities. This instrument is particularly well-suited for analyzing proteins, lipids, and metabolites in a single experiment, enabling researchers to gain deeper insights into biological systems | mass spectrometer, enhanced ion separation, fragmentation, detection, analyzing, proteins, lipids, metabolites | DOI:10.1021/acs.analchem.3c01155 | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_027321 | SCR_027321 | 2026-08-08 12:08:11 | 0 | ||||||||||
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Turtle-Tech: BioDigital-QING Digital PCR System Resource Report Resource Website |
Turtle-Tech: BioDigital-QING Digital PCR System (RRID:SCR_027326) | instrument resource | BioDigital Qing is a digital PCR system with automated droplet preparation and reagent formulation, enabling all essential steps of digital PCR—including compartmentalization, thermal cycling, and data acquisition—to be completed on a single instrument. Utilizing nucleic acid quantification technology, it allows for absolute quantification without the need for a standard curve. A large volume of reaction mixture is partitioned or digitized into thousands of small, independent reactions, such that each microchamber contains either one or zero target copies. The original concentration is then calculated using statistical methods based on the number of positive and negative microchambers. | PCR system, automated droplet preparation and reagent formulation, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_027326 | SCR_027326 | 2026-08-08 12:07:59 | 0 | |||||||||||
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Bruker: BioSpec 70/30 USR MRI system Resource Report Resource Website 1+ mentions |
Bruker: BioSpec 70/30 USR MRI system (RRID:SCR_027282) | instrument resource | High-field, preclinical imaging system primarily used for research on small animals like mice and rats. It enables researchers to conduct detailed anatomical and functional studies, including morphological imaging, functional MRI (fMRI), diffusion tensor imaging (DTI), and MR spectroscopy (MRS). The system's high field strength allows for high-resolution imaging, enabling researchers to visualize intricate anatomical details and subtle changes in tissue and organ function. | High-field strength, preclinical imaging system, MRI, imaging, small animals, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_027282.pdf | Model_Number_BioSpec_70/30_USR | SCR_027282 | , Bruker BioSpec 70/30 USR, 7 Tesla Bruker BioSpec 70/30 USR MRI system | 2026-08-08 12:08:10 | 1 | |||||||||
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ESI: imageBIO266 system Resource Report Resource Website |
ESI: imageBIO266 system (RRID:SCR_027283) | instrument resource | Specialized laser ablation system designed for high-resolution, high-speed bioimaging using LA-ICP-MS (Laser Ablation Inductively Coupled Plasma Mass Spectrometry). Built to analyze elemental composition of biological samples, particularly tissues and cells, with focus on speed and precision. | Laser Ablation Inductively Coupled Plasma Mass Spectrometry, laser ablation system, bioimaging, analyze elemental composition of biological samples, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_027283.pdf | Model_Number_imageBIO266 | SCR_027283 | Elemental Scientific Lasers imageBIO266, imageBIO266 | 2026-08-08 12:07:58 | 0 | |||||||||
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BGI: DNBSeq PE150 BGISEQ-500 sequencing system Resource Report Resource Website |
BGI: DNBSeq PE150 BGISEQ-500 sequencing system (RRID:SCR_025899) | instrument resource | System composed of DNBseq PE150 sequencing platform for RNA sequencing transcriptome with BGISEQ-500 desktop sequencer which uses DNA nanoball and combinational probe anchor synthesis developed from Complete Genomics sequencing technologies to generate short reads at large scale. DNBseq PE150 sequencing platform uses DNA nanoballs that are loaded onto flow cells and then read using fluorescent probes. The platform then uses lasers to excite the probes and take millions of images to identify bases. | DNBseq PE150 sequencing platform, RNA sequencing transcriptome, BGISEQ-500 desktop sequencer, | uses: BGI: BGISEQ-500 | SCR_025899 | 2026-08-08 12:07:29 | 0 | |||||||||||
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Uvitech: Uvidoc HD6 gel imager Resource Report Resource Website 1+ mentions |
Uvitech: Uvidoc HD6 gel imager (RRID:SCR_025936) | instrument resource | Unique stand-alone platform and voice-controlled DNA/protein gel workstation for gel imaging. | DNA/protein, gel workstation, gel imager, imaging, UVIDOC HD6 imaging system, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_025936.pdf | Model_Number_HD6 | SCR_025936 | Uvidoc HD6 | 2026-08-08 12:07:29 | 1 | |||||||||
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Nikon: Diaphot 300 Inverted Microscope Resource Report Resource Website |
Nikon: Diaphot 300 Inverted Microscope (RRID:SCR_026001) | instrument resource | Inverted microscope designed for advanced microscopy applications. Allows for observing samples from below, making it ideal for examining living cells and tissue cultures.Includes fluorescence, phase contrast, and differential interference contrast imaging. Can be upgraded to use modern digital camera systems through the side port or one of the two eyepiece tubes. | inverted, microscope, examining, living cells, tissue cultures, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026001.pdf | Model_Number_Diaphot_300 | SCR_026001 | 2026-08-08 12:07:34 | 0 | ||||||||||
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Philips: Ingenia 3.0T MRI Scanner Resource Report Resource Website 1+ mentions |
Philips: Ingenia 3.0T MRI Scanner (RRID:SCR_025998) | instrument resource | First digital broadband MR system. MRI scanner samples the Magnetic Resonance signal directly in the coil on the patient, and sends it to the reconstructor via fiber-optic cable. Enables imaging with fewer coils and reduce patient set up time. | MRI, scanner, samples, Magnetic Resonance, imaging, | Model_Number_Ingenia_3.0T | https://www.usa.philips.com/healthcare/product/HC781342/ingenia-30t-mr-system#features | SCR_025998 | Ingenia 3.0T MRI Scanner | 2026-08-08 12:07:34 | 2 | |||||||||
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Zeiss: Cirrus 5000 Optical Coherence Tomography scanner Resource Report Resource Website 1+ mentions |
Zeiss: Cirrus 5000 Optical Coherence Tomography scanner (RRID:SCR_025999) | instrument resource | ZEISS CIRRUS 5000 non-invasive OCT angiography (OCTA) technology, you can confidently visualize retinal microvasculature and monitor change over time. | non-invasive OCT, visualize retinal microvasculature, monitor retina change over time, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_025999.pdf | Model_Number_Cirrus_5000 | https://www.zeiss.com/content/dam/med/ref_international/resource-center/conformance-and-interoperability/dicom/dicom_conformance_statement_cirrus_6000_5000_500_11.5.1.pdf | SCR_025999 | Zeiss Cirrus 5000 Optical Coherence Tomography (OCT) | 2026-08-08 12:07:36 | 1 | ||||||||
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Agilent: NovoCyte 3000 Flow Cytometer Resource Report Resource Website |
Agilent: NovoCyte 3000 Flow Cytometer (RRID:SCR_025890) | instrument resource | Agilent NovoCyte 3000 Flow Cytometer with 3 lasers (488, 405, 640 nm) and up 13 colors. 6 colors from violet laser; 5 colors from blue laser; 2 colors from red laser. NovoExpress software used for acquisition. | Agilent, Flow Cytometer, 3 lasers, 13 colors, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_025890.pdf | Model_Number_NovoCyte_3000 | https://www.agilent.com/cs/library/datasheets/public/datasheet-technical-specifications-novocyte-5994-1032en-agilent.pdf, https://www.agilent.com/cs/library/usermanuals/public/150014-NovoCyte%20Flow%20Cytometer%20Operator's%20Guide%20(RUO).pdf | SCR_025890 | , Novocyte 3000 Flow Cytometer, Novocyte | 2026-08-08 12:07:33 | 0 | ||||||||
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Leica: THUNDER Imager Tissue microscope Resource Report Resource Website 1+ mentions |
Leica: THUNDER Imager Tissue microscope (RRID:SCR_026034) | instrument resource | Microscope allows real-time fluorescence imaging of 3D tissue sections typically used in neuroscience and histology research. Acquire rich, detailed images of thick tissues, free from the haze of out-of-focus blur. | real-time fluorescence imaging, 3D tissue sections, neuroscience, histology, images, thick tissues, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026034.pdf | Model_Number_THUNDER | SCR_026034 | , THUNDER Imager Tissue, Leica THUNDER Imager Tissue | 2026-08-08 12:07:31 | 4 | |||||||||
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Moffitt spatialGE Resource Report Resource Website 1+ mentions |
Moffitt spatialGE (RRID:SCR_025980) | web application, software resource | Web application, a user friendly, point-and-click implementation of spatialGE R package. Contains collection of methods for visualization and spatial statistics analysis of tissue microenvironment and heterogeneity using spatial transcriptomics experiments. Used for user-friendly analysis of spatial transcriptomics data. | Moffitt Cancer Center, spatial transcriptomics data analysis, implementation of spatialGE R package, methods for visualization and spatial statistics analysis, tissue microenvironment and heterogeneity, spatial transcriptomics experiments, | NCI U01 CA274489; NCI T32 CA23339 |
DOI:10.1101/2024.06.27.601050 | Free, Freely available | SCR_025980 | Moffitt Cancer Center spatialGE, spatialGE | 2026-08-08 12:07:34 | 1 | ||||||||
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Roche: Ventana iScan Coreo Slide Scanner Resource Report Resource Website |
Roche: Ventana iScan Coreo Slide Scanner (RRID:SCR_026036) | instrument resource | Slide scanner provides automation for small-to medium-volume labs looking to make the transition to digital pathology. Scanner offers walk-away scanning of up to 160 slides, and produces high-quality images and offers advanced slide handling. | Ventana Medical Systems, slide scanner, slide, image, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026036.pdf | Model_Number_ iScan_Coreo | SCR_026036 | 2026-08-08 12:07:31 | 0 | ||||||||||
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BbrowserX Resource Report Resource Website 1+ mentions |
BbrowserX (RRID:SCR_025984) | web application, software resource | Analytics platform for large-scale single-cell datasets, equipped with AI-assisted features, and designed for scientists without coding experience. | BioTuring, analysis suit, single cell sequencing data, | Restricted | SCR_025984 | , BioTuring BbrowserX | 2026-08-08 12:07:30 | 4 | ||||||||||
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Thermo Fisher: EVOS FL Auto Imaging System Resource Report Resource Website 1+ mentions |
Thermo Fisher: EVOS FL Auto Imaging System (RRID:SCR_026039) | instrument resource | High-performance, fully-automated, inverted, multi-channel fluorescence and transmitted light imaging system controlled by the integrated EVOS FL Auto software. | Fluorescent microscope, microscope, imagining system, inverted, multi-channel, fluorescence, transmitted light, imaging | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026039.pdf | Model_Number_EVOS_FL_Auto | SCR_026039 | EVOS FL Auto | 2026-08-08 12:07:37 | 6 | |||||||||
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RADIOMETER: ABL90 FLEX PLUS blood gas analyser Resource Report Resource Website 1+ mentions |
RADIOMETER: ABL90 FLEX PLUS blood gas analyser (RRID:SCR_025872) | instrument resource | Cassette-based ABL90 FLEX analyzer can deliver 17 parameters from sample as small as 65 μL. ABL90 measures blood gas, electrolytes, metabolites and co-oximetry. The ABL90 analyzer can measure sample from syringe, capillary tube or test tube. Portable, automated analyzer that measures pH, blood gases, electrolytes, glucose, lactate, bilirubin, creatinine. | Radiometer America, blood gas analyzer, portable analyzer, automated analyzer, measures pH, blood gases, electrolytes, glucose, lactate, bilirubin, creatinine | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_025872.pdf | Model_Number_ABL90_FLEX_PLUS | https://7157e75ac0509b6a8f5c-5b19c577d01b9ccfe75d2f9e4b17ab55.ssl.cf1.rackcdn.com/ZWHFQQWX-PDF-1-425735-4431460414.pdf | SCR_025872 | ABL90 FLEX PLUS blood gas analyzer, Radiometer ABL90 FLEX PLUS blood gas analyzer, ABL90 FLEX PLUS | 2026-08-08 12:07:33 | 1 | ||||||||
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Anton Paar: SAXSpoint 5.0 Resource Report Resource Website |
Anton Paar: SAXSpoint 5.0 (RRID:SCR_025989) | instrument resource | Laboratory based X-ray beamline instrument. It performs Small-Angle X-ray Scattering (SAXS) and Wide-Angle X-ray Scattering (WAXS) to analyze the nanostructure of materials without requiring synchrotron facilities. SAXS system resolves nanostructures up to 620 nm. Offers flexible analysis of almost any material under ambient and non-ambient conditions. Number of additional optional features equip SAXSpoint 5.0 for future applications up to the micrometer range (USAXS). | scattering measurement, small-angle X-ray scattering, wide-angle X-ray scattering, analyze structure of materials at nanoscale, | is organization facet of: Anton Paar | THIS RESOURCE IS NO LONGER IN SERVICE | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_025989.pdf | Model_Number_SAXSpoint_5.0 | https://www.anton-paar.com/us-en/products/details/saxspoint-50/ | SCR_025989 | , Anton Paar SAXSpoint 5.0, SAXSpoint 5.0, Small-Angle X-ray Scattering point 5.0 | 2026-08-08 12:07:36 | 0 | ||||||
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Strex: Manual Cell Stretching System STB-10 Resource Report Resource Website 1+ mentions |
Strex: Manual Cell Stretching System STB-10 (RRID:SCR_025869) | instrument resource | System for evaluative purposes applies cell stretching and compression force and is operated manually. Has two versions available: 4 cm2 or 10 cm2 stretch chambers. Can mechanically stimulate monolayer and cultured cells and tissue to increase cell growth and shape. | Strex Cell Inc, evaluative purposes, cell stretching, compression force, operated manually, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_025869.pdf | Model_Number_STB-10 | https://biotools.com.au/wp-content/uploads/2024/05/Strex-Cell-Stretching-Systems-Catalogue.pdf, https://strexcell.com/wp-content/uploads/2015/01/SH01-1217-Stretching-System-Handbook-.pdf | SCR_025869 | Manual Cell Stretching System STB-10 | 2026-08-08 12:07:34 | 1 | ||||||||
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Covaris: CP02 Automated Dry Pulverizer Resource Report Resource Website |
Covaris: CP02 Automated Dry Pulverizer (RRID:SCR_026012) | instrument resource | Covaris cryoPREP Dry Pulverizer enables dry, non-contact cryopulverization of tissue samples in a closed system without the risk of carryover or cross-contamination. The cryoPREP system provides a simple and robust tissue processing method for low and high mass inputs. The specially engineered tissueTUBE is used to process samples and extract biomolecules from a diverse set of tissue samples ranging in mass from 15 mg up to 2 g. Both manual and automated versions of the cryoPREP Dry Pulverizers are available to suit your needs. | automated, dry, non-contact cryopulverization, tissue samples, closed system, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026012.pdf | SCR_026012 | Covaris cryoPREP Dry Pulverizers | 2026-08-08 12:07:36 | 0 |
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