Searching the RRID Resource Information Network

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes

Preparing word cloud

×

SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

Search

Type in a keyword to search

Filter by records added date
See new records

Options


Current Facets and Filters

  • Funding Agency:nsf (facet)

Facets


Recent searches

Snippet view Table view
Click the to add this resource to a Collection

473 Results - per page

Show More Columns | Download 473 Result(s)

Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
National High Magnetic Field Lab DC Field Core Facility
 
Resource Report
Resource Website
National High Magnetic Field Lab DC Field Core Facility (RRID:SCR_017358) NHMFL DC Field Laboratory access service resource, core facility, service resource Facility located at MagLab headquarters near Florida State University in Tallahassee. Contains 14 resistive magnet cells connected to 56 megawatt DC power supply and 15,000 square feet of cooling equipment to remove heat generated by magnets. Includes several superconducting magnets operating at millikelvin temperatures. Among these instruments is 45-tesla hybrid magnet, which offers scientists strongest continuous magnetic field in world. Research is supported by magnet plant and cryogenic system operators. Technicians design, build and repair instruments for user research. Magnet, NHMFL, magnetic, field, plant, cryogenic, is related to: Florida State University; Florida; USA NSF ;
Florida State ;
NIH ;
Department of Defense ;
Department of Energy
Restricted SCR_017358 DC Field Facility, NHMF Lab Facility 2026-08-04 09:44:07 0
Northwestern University Center for Atom Probe Tomography Core Facility
 
Resource Report
Resource Website
Northwestern University Center for Atom Probe Tomography Core Facility (RRID:SCR_017770) NUCAPT access service resource, core facility, service resource Facility specializes in high resolution chemical imaging by three dimensional atom probe tomography. APT produces three-dimensional (3D) atom-by-atom elementally and isotopically resolved image with sub-nanometer spatial resolution of sample volume typically 100 x 100 x 300 nm^3, by simultaneous high resolution direct-space imaging and atom-by-atom time of flight mass spectrometry. APT is particularly suited to study nano- or nanostructured materials. Atom, probe, tomography, chemical, imaging, 3D, isotopic, subnanometer, spacial, resoulution, sample, volume, nanostructured, material, service, core, ABRF, USEDit is listed by: ABRF CoreMarketplace
is related to: USEDit
has parent organization: Northwestern University; Illinois; USA
NSF DMR 0420532;
NSF DMR 1720139;
NSF ECCS 1542205;
Initiative for Sustainability and Energy (ISEN) at Northwestern University
Open SCR_017884, ABRF_726, ABRF_311 https://coremarketplace.org/?FacilityID=311 https://coremarketplace.org/?FacilityID=726, http://arc.nucapt.northwestern.edu SCR_017770 Northwestern University Center for Atom-Probe Tomography 2026-08-04 09:44:13 0
Columbia University Quantitative Proteomics and Metabolomics Core Facility
 
Resource Report
Resource Website
Columbia University Quantitative Proteomics and Metabolomics Core Facility (RRID:SCR_017747) access service resource, core facility, service resource Core provides identification of proteins and metabolites with differential quantitative expression in cells, tissues or in protein affinity purifications. Particular emphasis is on quantitative analysis of posttranslational modifications such as phosphorylation. Identification, protein, metabolite, quantitative, expression, cell, tissue, protein, affinity, purification, analysis, phosphorylation, service, core Columbia University ;
New York State Stem Cell Science Board (NYSTEM) ;
Department of Defense ;
NSF ;
NIH
Open ABRF_248 SCR_017747 Quantitative Proteomics and Metabolomics Center 2026-08-04 09:44:16 0
Northwestern University Pulsed Laser Deposition Core Facility
 
Resource Report
Resource Website
Northwestern University Pulsed Laser Deposition Core Facility (RRID:SCR_017889) PLD access service resource, core facility, service resource Core provides means to grow thin films of metals and metal oxides. Facility contains two state of art deposition chambers PVD PLD/MBE 2300 and a PVD nanoPLD 1000. PLD provides convenient way to make thin films of materials heretofore studied in bulk by pressing and sintering target from bulk material; facilities are available at Northwestern for pressing and sintering of targets. Grow, thin, film, metal, oxide, pulsed, laser, deposition, service, core, ABRF is listed by: ABRF CoreMarketplace DMR 1720139;
NSF ECCS 1542205
Open ABRF_746 SCR_017889 Pulsed Laser Deposition 2026-08-04 09:44:14 0
Northwestern University Jerome B. Cohen X-ray Diffraction Core Facility
 
Resource Report
Resource Website
50+ mentions
Northwestern University Jerome B. Cohen X-ray Diffraction Core Facility (RRID:SCR_017866) X-RAY access service resource, core facility, service resource Core provides general purpose x-ray equipment for diffraction and fluorescence studies. Examples of current measurements are: powder diffraction, single-crystal diffraction, thin-film reflectivity, thin-film diffraction, crystal truncation rod scattering, small angle scattering, Laue diffraction, residual stress, pole figures, EDX-ray fluorescence, x-ray standing waves, high-resolution x-ray diffraction, and grazing incidence small angle scattering. X-ray, diffraction, equipment, powder, single, crystal, thin, film, reflectivity, truncation, rod, scattering, small, angle, service, core is listed by: ABRF CoreMarketplace
has parent organization: Northwestern University; Illinois; USA
NSF DMR 1720139;
NSF ECCS 1542205;
Materials Research Center of Northwestern University
Open ABRF_3229 https://coremarketplace.org/?FacilityID=3229&citation=1 SCR_017866 Jerome B.Cohen X-Ray Diffraction Facility 2026-08-04 09:44:18 94
University of Wisconsin-Madison Chemistry Instrumentation Center - Mass Spectrometry Core Facility
 
Resource Report
Resource Website
University of Wisconsin-Madison Chemistry Instrumentation Center - Mass Spectrometry Core Facility (RRID:SCR_017931) access service resource, core facility, service resource Core provides mass spectrometers including Thermo Q Exactive Plus,Bruker impact II ,Bruker microflex LRF,Bruker ULTRAFLEX III,Shimadzu GCMS-QP2010S,Waters Acquity LCMS. Instrumentation, mass, spectrometry, service, core, ABRF is listed by: ABRF CoreMarketplace NIH Office of the Director S10 OD020022;
NCRR S10 RR024601;
NSF
Restricted ABRF_809 SCR_017931 Mass Spectrometry Facility 2026-08-04 09:44:19 0
Panel Study of Income Dynamics
 
Resource Report
Resource Website
10+ mentions
Panel Study of Income Dynamics (RRID:SCR_008976) PSID data set, data or information resource Long-term longitudinal dataset with information on generational links and socioeconomic and health conditions of individuals over time. The central foci of the data are economic and demographic, with substantial detail on income sources and amounts, wealth, savings, employment, pensions, family composition changes, childbirth and marriage histories, and residential location. Over the life of the PSID, the NIA has funded supplements on wealth, health, parental health and long term care, housing, and the financial impact of illness, thus also making it possible to model retirement and residential mobility. Starting in 1999, much greater detail on specific health conditions and health care expenses is included for respondent and spouse. Other enhancements have included a question series about emotional distress (2001); the two stem questions from the Composite International Diagnostic Interview to assess symptoms of major depression (2003); a supplement on philanthropic giving and volunteering (2001-03); a question series on Internet and computer use (2003); linkage to the National Death Index with cause of death information for more than 4,000 individuals through the 1997 wave, updated for each subsequent wave; social and family history variables and GIS-linked environmental data; basic data on pension plans; event history calendar methodology to facilitate recall of employment spells (2001). The reporting unit is the family: single person living alone or sharing a household with other non-relatives; group of people related by blood, marriage, or adoption; unmarried couple living together in what appears to be a fairly permanent arrangement. Interviews were conducted annually from 1968 through 1997; biennial interviewing began in 1999. There is an oversample of Blacks (30%). Waves 1990 through 1995 included a 20% Hispanic oversample; within the Hispanic oversample, Cubans and Puerto Ricans were oversampled relative to Mexicans. All data from 1994 through 2001 are available as public release files; prior waves can be obtained in archive versions. The special files with weights for families are also available. Restricted files include the Geocode Match File with information for 1968 through 2001, the 1968-2001 Death File, and the 1991 Medicare Claims File. * Dates of Study: 1968-2003 * Study Features: Longitudinal, Minority Oversampling * Sample Size: 65,000+ Links * ICPSR Series: http://www.icpsr.umich.edu/icpsrweb/ICPSR/series/00131 * ICPSR 1968-1999: Annual Core Data: http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/07439 * ICPSR 1968-1999: Supplemental Files: http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/03202 * ICPSR 1989-1990: Latino Sample: http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/03203 longitudinal, minority, employment, income, wealth, expenditure, health, marriage, childbearing, child development, philanthropy, education, family income, attitude, economic behavior, economic change, economic condition, employment history, family, family history, fertility, food aid, household expenditure, household income, housing, population trend, poverty, social change, social indicator, socioeconomic status, african-american, survey, interview, questionnaire, census data, latino, economic status, demographic, intergeneration, individual, health condition, economic, income source, income amount, pension, family composition, childbirth, marriage history, residential location, emotional distress, hispanic, cuban, puerto rican, mexican is listed by: Inter-university Consortium for Political and Social Research (ICPSR)
has parent organization: University of Michigan; Ann Arbor; USA
Aging NIA ;
U.S. Department of Health and Human Services ;
APSE ;
United States Department of Agriculture ;
NICHD ;
NSF
Public, Acknowledgement requested nlx_152067 SCR_008976 Panel Study of Income Dynamics - PSID, PSID - A national survey of socioeconomics and health over lifetimes and across generations, Panel Study of Income Dynamics (PSID) 2026-08-04 09:42:15 17
New Immigrant Survey
 
Resource Report
Resource Website
1+ mentions
New Immigrant Survey (RRID:SCR_008973) NIS data set, data or information resource Public use data set on new legal immigrants to the U.S. that can address scientific and policy questions about migration behavior and the impacts of migration. A survey pilot project, the NIS-P, was carried out in 1996 to inform the fielding and design of the full NIS. Baseline interviews were ultimately conducted with 1,127 adult immigrants. Sample members were interviewed at baseline, 6 months, and 12 months, with half of the sample also interviewed at three months. The first full cohort, NIS-2003, is based on a nationally representative sample of the electronic administrative records compiled for new immigrants by the US government. NIS-2003 sampled immigrants in the period May-November 2003. The geographic sampling design takes advantage of the natural clustering of immigrants. It includes all top 85 Metropolitan Statistical Areas (MSAs) and all top 38 counties, plus a random sample of other MSAs and counties. Interviews were conducted in respondents'' preferred languages. The baseline was multi-modal: 60% of adult interviews were administered by telephone; 40% were in-person. The baseline round was in the field from June 2003 to June 2004, and includes in the Adult Sample 8,573 respondents, 4,336 spouses, and 1,072 children aged 8-12. A follow-up was planned for 2007. Several modules of the NIS were designed to replicate sections of the continuing surveys of the US population that provide a natural comparison group. Questionnaire topics include Health (self-reports of conditions, symptoms, functional status, smoking and drinking history) and use/source/costs of health care services, depression, pain; background; (2) Background: Childhood history and living conditions, education, migration history, marital history, military history, fertility history, language skills, employment history in the US and foreign countries, social networks, religion; Family: Rosters of all children; for each, demographic attributes, education, current work status, migration, marital status and children; for some, summary indicators of childhood and current health, language ability; Economic: Sources and amounts of income, including wages, pensions, and government subsidies; type, value of assets and debts, financial assistance given/received to/from respondent from/to relatives, friends, employer, type of housing and ownership of consumable durables. * Dates of Study: 2003-2007 * Study Features: Longitudinal * Sample Size: 13,981 longitudinal, immigrant, migration, behavior, adult human, spouse, child, questionnaire, health, family, economic, self-report, smoking, drinking, health care service, depression, pain, background, childhood history, living condition, education, migration history, marital history, military history, fertility history, language skill, employment history, social network, religion, education, work status, income, wage, pension, government subsidy, asset, debt, financial assistance, interview has parent organization: Princeton University; New Jersey; USA Aging NIA ;
NICHD ;
Office of Behavioral and Social Sciences Research ;
NSF ;
US Citizenship and Immigration Services ;
ASPE ;
Pew Charitable Trusts
Public: Users must complete a short registration process the first time they access the data. nlx_152061 SCR_008973 2026-08-04 09:42:15 2
Roadmap
 
Resource Report
Resource Website
10+ mentions
Roadmap (RRID:SCR_017207) software application, software resource Software tool to display surface of macromolecule and its properties. Uses projections to map van der Waals or solvent accessible surface of macromolecule onto plane., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. Display, surface, macromolecule, property, projection, van der Waal is related to: Purdue University; West Lafayette; Indiana NSF ;
NIH ;
Medical Research Council
PMID:8384042 THIS RESOURCE IS NO LONGER IN SERVICE SCR_017207 2026-08-04 09:44:08 14
Conservation
 
Resource Report
Resource Website
1000+ mentions
Conservation (RRID:SCR_016064) software application, software resource, software toolkit Software for scoring protein sequence conservation using the Jensen-Shannon divergence. It can be used to predict catalytic sites and residues near bound ligands. scoring, protein, sequence, conservation, Jensen-Shannon, divergence, predict, catalytic, site, bound, ligands, clustal, fasta, concave is related to: Princeton University; New Jersey; USA NIH T32 HG003284;
NSF IIS-0612231;
NSF PECASE MCB-0093399;
NIGMS GM076275;
NIH P50 GM071508
PMID:17519246 Free, Available for download SCR_016064 Conservation-code 2026-08-04 09:43:47 1564
OrthoANIu
 
Resource Report
Resource Website
50+ mentions
OrthoANIu (RRID:SCR_022562) software application, software resource, data analytics software Software tool for calculating average nucleotide identity. calculating average nucleotide identity, nucleotide identity NSF NRF-2014M3C9A3063541;
NSF NRF-2015R1A2A2A01008404
PMID:26585518 SCR_022562 Average Nucleotide Identity 2026-08-04 09:45:06 70
PyRosetta
 
Resource Report
Resource Website
10+ mentions
PyRosetta (RRID:SCR_018541) software application, standalone software, software resource Interactive Python based interface to Rosetta molecular modeling suite. Stand alone Python based implementation of Rosetta molecular modeling package that allows users to write custom structure prediction and design algorithms using major Rosetta sampling and scoring functions. Molecular modeling, custom structure prediction, design algorithm, energy function, scoring function, bio.tools uses: Python Programming Language
is listed by: bio.tools
is listed by: Debian
is related to: Rosetta
has parent organization: Johns Hopkins University; Maryland; USA
NIGMS R01 GM73151;
NIGMS R01 GM078221;
NSF 0846324
PMID:20061306 Free, Freely available biotools:pyrosetta https://bio.tools/pyrosetta SCR_018541 Python Rosetta 2026-08-04 09:44:21 20
CHISEL
 
Resource Report
Resource Website
1+ mentions
CHISEL (RRID:SCR_023220) CHISEL software application, software resource Software tool to infer allele and haplotype specific copy numbers in individual cells from low coverage single cell DNA sequencing data. Integrates weak allelic signals across individual cells, powering strength of single cell sequencing technologies to overcome weakness. Includes global clustering of RDRs and BAFs, and rigorous model selection procedure for inferring genome ploidy that improves both inference of allele specific and total copy numbers. infer allele and haplotype specific copy numbers, individual cells, low coverage single cell DNA sequencing data, weak allelic signals, weak signals integration, NHGRI R01HG007069;
NCI U24CA211000;
NSF CCF 1053753;
Chan Zuckerberg Initiative DAF grants ;
NCI P30CA072720;
O’Brien Family Fund for Health Research ;
Wilke Family Fund for Innovation
DOI:10.1038/s41587-020-0661-6 Free, Available for download, Freely available SCR_023220 Copy-number Haplotype Inference in Single-cell by Evolutionary Links 2026-08-04 09:45:13 2
Antarctic and Southern Ocean Data Portal
 
Resource Report
Resource Website
Antarctic and Southern Ocean Data Portal (RRID:SCR_002193) ASODS data set, data or information resource Accepts and provides access to geoscience data, primarily marine, collected from oceanographic expeditions in the Antarctic region. The synthesis began in 2003 as the Antarctic Multibeam Bathymetry and Geophysical Data Synthesis (AMBS) with a focus on multibeam bathymetry field data and other geophysical data from the Southern Ocean collected with the R/V N. B. Palmer. In 2005, the effort was expanded to include all routine underway geophysical and oceanographic data collected with both the R/V N. B. Palmer and R/V L. Gould, the two primary research vessels serving the US Antarctic Program. Data available include seafloor bathymetry, subbottom profiling, trackline gravity and magnetics, meteorological, and water column data as well as basic cruise information for all Palmer and Gould expeditions. Seafloor bathymetry data are provided both as raw swath data as well as in gridded form through the Global Multi-Resolution Topography (GMRT) synthesis. This gridded compilation of seafloor bathymetry data can be accessed through GeoMapApp, Create Maps and Grids and through an OGC-compliant Web Map Service. GeoMapApp is an integrated mapping application that provides access to many additional regional bathymetric grids, seismic, radar, gravity and magnetics profiles as well as other map and grid compilations for the Antarctic continent including LIMA. oceanography, ocean, marine, antarctic, southern ocean, geoscience, polar, seafloor, bathymetry, subbottom profiling, trackline gravity, magnetics, meteorological, water column, map, grid is listed by: CINERGI
is listed by: re3data.org
has parent organization: Marine Geoscience Data System
NSF Free, Freely available nlx_154703 SCR_002193 Antarctic & Southern Ocean Data Portal 2026-08-04 09:40:35 0
University of New Hampshire University Instrumentation Center Core Facility
 
Resource Report
Resource Website
University of New Hampshire University Instrumentation Center Core Facility (RRID:SCR_021101) UIC access service resource, core facility, service resource University wide core facility offers NMR,SEM including FIB, EBS, EBSD, Tensile Stage,Confocal,X-Ray Photoelectron Spectroscopy,X-Ray Microscope aka Micro CT, Expert analysis of research and industrial samples,Training in scientific instrument operation and data analysis, Maintenance, repair, and calibration of instruments,Specialty instrument engineering design and application services,Facilitation of access to scientific instruments throughout the university. USEDit, ABRF, ABRF is listed by: ABRF CoreMarketplace NIGMS GM113131;
NSF 1429282;
NSF 1828319;
NSF 1337897;
NSF OIA 1757371
open ABRF_640 https://coremarketplace.org/?FacilityID=640 SCR_021101 University Instrumentation Center, University of New Hampshire University Instrumentation Center 2026-08-04 09:44:43 0
Boise State University Biomolecular Research Center Core Facility
 
Resource Report
Resource Website
10+ mentions
Boise State University Biomolecular Research Center Core Facility (RRID:SCR_019174) BRC access service resource, core facility, service resource Designed to provide supportive environment for interdisciplinary research and education with opportunities for students and faculty members alike with focus on biomolecules study with emphasis on proteins and protein interactions. Provides instrumentation and facilities for characterization of biomolecules and their role in variety of biomedical and environmental processes. Partnerships between Center and Idaho-BRIN/INBRE, UI, ISU, Boise VA Medical Center, College of Idaho, and Northwest Nazarene University. BRC provides seminars, training workshops, and other networking opportunities. USEDit, protein study, protein interactions, biomolecule, biomedical and environmental processes, ABRF, ABRF is listed by: ABRF CoreMarketplace
has parent organization: Boise State University; Idaho; USA
NSF 0619793;
NSF 0923535
PMID:34121933 ABRF_664 https://coremarketplace.org/?FacilityID=664 SCR_019174 The Biomolecular Research Center 2026-08-04 09:44:33 49
Cornell University BRC Epigenomics Core Facility
 
Resource Report
Resource Website
10+ mentions
Cornell University BRC Epigenomics Core Facility (RRID:SCR_021287) access service resource, core facility, service resource Provides service that maps protein DNA interactions genome wide, tracks experimental metadata, and implements quality controlled data processing and research based analysis pipelines. Provides epigenomic and bioinformatic research resources and services that include sample preparation services and data generation. Open source platforms enable and reinforce FAIR data practices. Core is able to receive and process cell and tissue samples for various diagnostic epigenetic assays. USEDit, ABRF is listed by: ABRF CoreMarketplace
has parent organization: Cornell University; New York; USA
NIH ;
NSF
ABRF_1185 https://coremarketplace.org/?FacilityID=1185 SCR_021287 CU Epigenomics Core Facility, Cornell University Epigenomics Core Facility 2026-08-04 09:44:46 11
University of California at Santa Cruz Stable Isotope Laboratory Core Facility
 
Resource Report
Resource Website
1+ mentions
University of California at Santa Cruz Stable Isotope Laboratory Core Facility (RRID:SCR_022947) SiL access service resource, core facility, service resource Provides light stable isotope ratio analysis services to scientists from UCSC and from around the world. ABRF, USEDit, light stable isotope ratio analysis services, is related to: USEDit
has parent organization: University of California at Santa Cruz; California; USA
NSF Open SCR_022947 UC Santa Cruz Stable Isotope Laboratory 2026-08-04 09:45:10 8
University of Michigan Statistics Online Computational Resource Core Facility
 
Resource Report
Resource Website
University of Michigan Statistics Online Computational Resource Core Facility (RRID:SCR_022917) SOCR access service resource, core facility, service resource SOCR designs, validates and freely disseminates knowledge. The Resource develops AI/ML tools, mathematical models, and end-to-end data analytic protocols for biomedical and health studies. It provides portable online aids for probability, statistics and health science education, promotes technology enhanced instruction, supports efficient statistical computing, supports AI-services, and advances predictive big data analytics. The SOCR platform includes repository of interactive apps, datasets and case-studies, computational tools, visualization approaches, instructional resources, learning materials, and curricular components. SOCR faculty, staff, and students support data and information science collaborations and analytic partnerships involving biomedical, healthcare, and biostatistical investigations. ABRF, probability, statistics and health science education, statistical computing, predictive big data analytics is listed by: ABRF CoreMarketplace
has parent organization: University of Michigan; Ann Arbor; USA
NSF ;
NIH
ABRF_1602 https://coremarketplace.org/?FacilityID=1602&citation=1 SCR_022917 Statistics Online Computational Resource (SOCR), University of Michigan Ann Arbor Statistics Online Computational Resource (SOCR) 2026-08-04 09:45:08 0
DOMMINO - Database Of MacroMolecular INteractiOns
 
Resource Report
Resource Website
1+ mentions
DOMMINO - Database Of MacroMolecular INteractiOns (RRID:SCR_005958) DOMMINO database, data or information resource DOMMINO is a comprehensive structural database on macromolecular interactions. As of June, 2011, it contains more than 407,000 binary interactions. The distinctive features of DOMMINO are: # Automated updates: DOMMINO is fully automated and is designed to update itself on a weekly basis, one day after a PDB weekly update. Thus, the community will be able to study macromolecular interactions almost immediately after they are released by PDB. # Coverage of non-domain mediated interactions: In addition to domain-domain and domain-peptide interactions the database characterizes the interaction between domains and unstructured protein regions that are not parts of a domain, such as inter-domain linkers and N- and C-termini. The interactions that involve the latter unstructured parts of proteins have been included to the database for the first time providing additional ~186,000 interactions (~45% of the total number of interactions, as of June, 2011). # Coverage of new structural domains: DOMMINO employs one of the most accurate structural classifications of proteins, SCOP. In addition to the existing SCOP-annotated domains, we employ a state-of-the-art machine learning approach to classify newer protein structures into existing SCOP families. With the progress of structural genomics, we do not expect a significant growth of the number of structurally novel folds or protein families and therefore our method allows covering almost all new protein structures. In total, using this predictive approach has allowed us to add more than 261,000 new interactions, almost twice as many as existing SCOP-annotated interactions. # The web-interface is designed to give the user a possibility of a flexible search as well as the capability to study macromolecular interactions in a PDB structure at the interaction network level and at the individual interface level. The web interface of the DOMMINO database includes a comprehensive list of help topics linked to the specific actions. In addition, we have designed a step-by-step tutorial that covers all aspects of working with the data from DOMMINO using the web interface. macromolecular interaction, macromolecule, structural domain, non-domain mediated interaction, protein, domain, peptide, interaction, protein-protein interaction, protein-peptide interaction, protein-dna interactions, protein-rna interactions, rna-rna interactions, rna-dna interactions, interface structure, bio.tools is listed by: Debian
is listed by: bio.tools
is related to: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB)
is related to: SCOP: Structural Classification of Proteins
has parent organization: University of Missouri; Missouri; USA
NSF DBI-0845196 PMID:22135305 biotools:dommino, nlx_151316 http://orion.rnet.missouri.edu/~nz953/DOMMINO/, https://bio.tools/dommino SCR_005958 Database Of MacroMolecular INteractiOns 2026-08-04 09:41:29 1

Can't find your Tool?

We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.

Can't find the RRID you're searching for? X
X
  1. RRID Portal Resources

    Welcome to the RRID Resources search. From here you can search through a compilation of resources used by RRID and see how data is organized within our community.

  2. Navigation

    You are currently on the Community Resources tab looking through categories and sources that RRID has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.

  3. Logging in and Registering

    If you have an account on RRID then you can log in from here to get additional features in RRID such as Collections, Saved Searches, and managing Resources.

  4. Searching

    Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:

    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into RRID you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.