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http://isps.yale.edu/research/data
Data archive to assist in the sharing of research grade information pertaining to the social and economic sciences. The majority of digital content currently consists of social science research data from experiments, program files with the code for analyzing the data, requisite documentation to use and understand the data, and associated files. Access to the ISPS Data Archive is provided at no cost and is granted for scholarship and research purposes only. When possible, Data is linked to Projects and Publications, via the ISPS KnowledgeBase. ISPS operates in accordance with the prevailing standards and practices of the digital preservation community including the Open Archival Information System (OAIS) Reference Model (ISO 14721:2003) and the Data Documentation Initiative (DDI) standard. Accordingly, ISPS supports digital life-cycle management, interoperability, and preferred methods of preservation. The ISPS Data Archive is intended for use by social science researchers, policy-makers, and practitioners who are conducting or analyzing field (and other) experiments in various social science disciplines. Currently, Replication Files originate with ISPS-affiliated scholars.
Proper citation: ISPS Data Archive (RRID:SCR_003127) Copy
A national research infrastructure that provides bioinformatics support to life science researchers in Sweden. Their work is supported by the Swedish Research Council.
Proper citation: Bioinformatics Infrastructure for Life Sciences (RRID:SCR_014723) Copy
Proper citation: Macquarie University; Sydney; Australia (RRID:SCR_012796) Copy
https://github.com/srkesler/bnets
Software repository containing code for measuring brain networks from structural and functional MRI data. Several programs require MATLAB to run.
Proper citation: Brain Networks Toolbox (RRID:SCR_014788) Copy
An institute which provides infrastructure, services, and training to support clinical and translational research. It develops broad coalitions and partnerships at the local and national levels to enable a transformation of the research environment.
Proper citation: UCSF Clinical and Translational Science Institute (RRID:SCR_014711) Copy
https://www.spscientific.com/AboutOurTrustedBrands/
Commercial organization located in Warminster, Pennsylvania, USA, part of SP Industries, Inc. Provides VirTis, FTS Systems, Hotpack, Hull, Genevac, and PennTech scientific equipment. Manufactures freeze drying/lyophilization, centrifugal evaporation and concentration, temperature control/thermal management, glassware washers, controlled environments, vial washing and tray loading machines., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.
Proper citation: SP Scientific (RRID:SCR_017367) Copy
https://www.bruker.com/about-us.html
Commercial organization located in Massachusetts, USA, for scientific instruments and analytical and diagnostic solutions. Bruker equipment can be used in life science molecular research, in applied and pharma applications,microscopy, nano-analysis and industrial applications. Provider of high-performance systems for cell biology, preclinical imaging, clinical phenomics and proteomics research, clinical microbiology, and for molecular pathology research.
Proper citation: Bruker Corporation (RRID:SCR_017365) Copy
https://www.hamamatsu.com/eu/en/index.html
Manufacturer of optical sensors including, photomultiplier tubes, electric light sources, and other optical devices and their applied instruments for scientific, technical and medical use.
Proper citation: Hamamatsu Photonics (RRID:SCR_017105) Copy
https://www.olympus-global.com/
Japanese manufacturer of optics and reprography products specializing in microscopes and thermometers.
Proper citation: Olympus (RRID:SCR_017564) Copy
Danish, privately owned company specializing in non-invasive stimulation systems for treatment of major depressive disorder and neuroscience research based on use of transcranial magnetic stimulation.
Proper citation: MagVenture (RRID:SCR_017563) Copy
http://www.npielectronic.de/home.html
Commercial organization that builds and supplies research-related equipment such as amplifiers.
Proper citation: NPI electronic (RRID:SCR_016002) Copy
Commercial organization providing laboratory solutions in the fields of psychophysiology, neuroscience, social science, life science, child and behavioral development. Offers a wide array of products and services including signal acquisition hardware used to collect a variety of measures including Cardiac Impedance, HRV, GSR/GSC, ECG/EKG, HR, BP, and EMG supplemented with software suite of analysis applications.
Proper citation: MindWare Technologies (RRID:SCR_016972) Copy
https://github.com/JustinChu/ntsm
Software alignment free, ultra low coverage, sequencing technology agnostic, intraspecies sample comparison tool for sample swap detection. Used to count number of specific k-mers within sequence data. The counts can then be compare to other counts to determine to compute the probability that sample are of the same origin to discover incongruent samples or sample swaps.
Proper citation: ntsm (RRID:SCR_024994) Copy
https://compbio.uth.edu/FusionGDB2/
Functional annotation database of human fusion genes.FusionGDB 2.0 has updates of contents such as up-to-date human fusion genes, fusion gene breakage tendency score with FusionAI deep learning model based on 20 kb DNA sequence around BP, investigation of overlapping between fusion breakpoints with human genomic features across cellular role's categories, transcribed chimeric sequence and following open reading frame analysis with coding potential based on deep learning approach with Ribo-seq read features, and rigorous investigation of protein feature retention of individual fusion partner genes in protein level.
Proper citation: FusionGDB2 (RRID:SCR_025299) Copy
https://medinform.jmir.org/2015/4/e35
Algorithm for generating unique study identifiers in distributed and validatable fashion, in multicenter research. Light-weight, block chain style resource identifier generation for tracking resource linkage, provenance, utilization, and visualization. NHash has unique set of properties: (1) it is a pseudonym serving the purpose of linking research data about study participant for research purposes; (2) it can be generated automatically in completely distributed fashion with virtually no risk for identifier collision; (3) it incorporates set of cryptographic hash functions based on N-grams, with combination of additional encryption techniques such as shift cipher; (d) it is validatable (error tolerant) in the sense that inadvertent edit errors will mostly result in invalid identifiers.
Proper citation: NHash Identifier (RRID:SCR_025313) Copy
Provides catalogue of confirmed and predicted DNA replication origin sites. At present this is limited to budding yeast and fission yeast. Data have been collated as culmination of number of genome-wide studies to identify location of replication origins throughout budding yeast genome. In addition to genome-wide studies data from large number of other origin mapping and characterization studies have been included.
Proper citation: OriDB (RRID:SCR_025365) Copy
https://github.com/tovaroe/GBMatch_CNN/
Software tool for predicting TS and risk from glioblastoma whole slide images. Used to predict risk scores and transcriptional subtypes from whole slide images of glioblastomas.
Proper citation: GBMatch_CNN - GBMPredictor (RRID:SCR_025316) Copy
https://snp.icgrc.info/cannseek
Database of Cannabis sativa Single Nucleotide Polymorphisms discovered from NGS sequences and BioSamples available in NCBI. Sequence reads were called against cs10, Purple kush, and Finola reference assemblies using GATK and Parabricks pipelines.
Proper citation: CannSeek Database of Cannabis sativa SNPs (RRID:SCR_025579) Copy
Portal built for the release and sharing of data resources of "Big Earth Data Science Engineering Program (CASEarth)" launched by the Chinese Academy of Sciences. A global raster data of land cover and land use. This data can be used for mapping and spatial modeling in Geographic Information Systems (GIS) or other computer programs. This website is not accessible from the USA.
Proper citation: Chinese CASEarth Data Sharing and Service Portal (RRID:SCR_025660) Copy
https://polymerscreen.yale.edu
Open access web app that allows users to search for optimal condition for extraction of membrane proteins into membrane active polymers which allows for retention of native membrane environment around target protein.
Proper citation: MAP Database Guide for Membrane Protein Solubilization (RRID:SCR_025656) Copy
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