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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
Center that is organized to address cross-cutting themes that represent gaps in understanding the relationship between nutrition and health, and the pathogenesis of obesity and its associated metabolic diseases.
Proper citation: Boston Nutrition and Obesity Research Centers (RRID:SCR_015420) Copy
Center dedicated to extending prevention and management research of proven efficacy to both clinical and community settings, with the goal of improving the diabetes-related health of Native Americans. The CAIANDTR provides core services and consultation locally, regionally, and nationally in areas relevant to NIDDK's translational research agenda.
Proper citation: Center for American Indian and Alaska Native Diabetes Translational Research (RRID:SCR_015146) Copy
https://www.med.unc.edu/marsicolunginstitute
Research team dedicated to finding a cure for cystic fibrosis lung disease. This team utilizes ion transport physiology, transgenic and gene-targeted mouse models, Phase I clinical trials, and more to research this cause.
Proper citation: Cystic Fibrosis and Pulmonary Diseases Research and Treatment Center (RRID:SCR_015388) Copy
https://pediatrics.duke.edu/divisions/nephrology
Center that emphasizes diagnosis, treatment and management of all types of nephrologic and hypertensive disorders in infants, children, and adolescents. Therapies range from medical management to renal replacement therapy.
Proper citation: Pediatric Centers of Excellence in Nephrology at Duke Division of Pediatric Nephrology (RRID:SCR_015303) Copy
http://www.dukekidneycenter.org/
Research center which investigates the mechanisms underlying the impact kidney disease has on cardiovascular morbidity and mortality using genetic and basic science approaches.
Proper citation: Duke O'Brien Center for Kidney Research (RRID:SCR_015268) Copy
Research center at Harvard University that seeks to establish a research environment which encourages the approach to defining common clinical nutrition research problems. It aims to promote, facilitate and enhance research relating to nutrition and health within the Boston area.
Proper citation: Nutrition and Obesity Research Centers at Harvard (RRID:SCR_015422) Copy
Research centers that provide support for basic, preclinical, and clinical research efforts to advance scientific knowledge and new therapies for cystic fibrosis.
Proper citation: Cystic Fibrosis Research and Translation Centers (RRID:SCR_015383) Copy
https://research.med.virginia.edu/pcen/
Center for the study of the development of the kidney during embryonic, fetal and postnatal life. As a collaboration between the University of Virginia and Tulane University, they use an interdisciplinary and inter-institutional approach for their research.
Proper citation: Pediatric Centers of Excellence in Nephrology at University of Virginia (RRID:SCR_015307) Copy
http://www.medschool.umaryland.edu/norc/
Center that fosters multidisciplinary research approaches to understanding the impact of nutrition on risk for chronic disease and aims to translate this knowledge into effective clinical treatments and prevention efforts.
Proper citation: Mid-Atlantic Nutrition Obesity Research Center (RRID:SCR_015430) Copy
https://norc.pbrc.edu/aboutus.asp
Provides scientific cores including Molecular Mechanisms Core (genomics and cellular), Human Phenotyping Core (characterization of phenotypes predisposing to obesity and metabolic syndrome and behavioral interventions to counteract those) and Animal Models and Phenotyping Core. Includes organizing administrative process to announce, collect, review and award Pilot and Feasibility grants, setting criteria for use of core facilities, and maintaining access to data management services.
Proper citation: Louisiana State University Pennington Biomedical Nutrition Obesity Research Center Core Facility (RRID:SCR_015435) Copy
http://www.med.upenn.edu/idom/
Diabetes research center created to address the prevalence of diabetes and obesity. The goal of the center is to support and develop successful approaches to the prevention, treatment, and cure of diabetes mellitus and obesity.
Proper citation: Penn Diabetes Research Center (RRID:SCR_015123) Copy
https://www.ebi.ac.uk/metagenomics/
Portal for the analysis and exploration of metagenomic, metatranscriptomic, amplicon and assembly data. Provides functional and taxonomic analyses of user-submitted sequences, as well as analysis of publicly available metagenomic datasets held within the European Nucleotide Archive (ENA).Microbiome analysis resource in 2020.
Proper citation: MGnify (RRID:SCR_016429) Copy
http://sleepdisordergenetics.org
Software platform for accelerating genetic discoveries for sleep disturbance and circadian traits.
Proper citation: Sleep Disorder Knowledge Portal (RRID:SCR_016611) Copy
https://bioinformatics.niaid.nih.gov/netcirchro/
Software interactive tool for visualizing and analyzing network data in the spatial context of the chromosome. Used to discover the role of gene organization in functional regulatory networks. Plugin enables users of Cytoscape to overlay networks onto a circular chromosomal map.
Proper citation: NetCirChro (RRID:SCR_016616) Copy
https://joinsolver.niaid.nih.gov
Software tool to analyze human immunoglobulin V(D)J recombination and performing Ig nucleotide and amino acid alignment, as well as extensive mutation and Complementarity Determining Region 3 (CDR3H) analysis.
Proper citation: JOINSOLVER (RRID:SCR_016619) Copy
https://www.niaid.nih.gov/research/simmune-project
Software package to define the interactions between individual molecules in a large network or the behaviors of cells in response to external signals. It consists of three components: Modeler, Cell Designer and Simulator.
Proper citation: Simmune (RRID:SCR_016618) Copy
http://www.bx.psu.edu/~giardine/vision/
International project to analyze mouse and human hematopoiesis, and provide a tractable system with clear clinical significance and importance to NIDDK. Collection of information from the flood of epigenomic data on hematopoietic cells as catalogs of validated regulatory modules, quantitative models for gene regulation, and a guide for translation of research insights from mouse to human.
Proper citation: ValIdated Systematic IntegratiON of epigenomic data (RRID:SCR_016921) Copy
Web application for quantitative KInetic MOdels of biological SYStems. Platform includes public data repository of relevant published measurements, including metabolite concentrations, flux data, and enzyme measurements and tools in order to build ODE-based kinetic model. Designed to search, exchange and disseminate experimental data and associated kinetic models for systems modeling community.
Proper citation: Kinetic Models of Biological Systems (KiMoSys) (RRID:SCR_017423) Copy
https://icsd.products.fiz-karlsruhe.de/
Database for completely identified inorganic crystal structures. Collection of known inorganic crystal structures published since 1913, including their atomic coordinates. Includes only data which have passed thorough quality checks. Tool for materials research.
Proper citation: Inorganic Crystal Structure Database (ICSD) (RRID:SCR_017429) Copy
Repository to make datasets resulting from NIH funded research more accessible, citable, shareable, and discoverable. Data submitted will be reviewed to ensure there is no personally identifiable information in data and metadata prior to being published and in line with FAIR -Findable, Accessible, Interoperable, and Reusable principles. Data published on Figshare is assigned persistent, citable DOI (Digital Object Identifier) and is discoverable in Google, Google Scholar, Google Dataset Search, and more.Complited on July,2020. Researches can continue to share NIH funded data and other research product on figshare.com.
Proper citation: NIH Figshare Archive (RRID:SCR_017580) Copy
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