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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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MABTECH Resource Report Resource Website 1000+ mentions |
MABTECH (RRID:SCR_013398) | commercial organization | An Antibody supplier | nlx_152403, grid.452552.1 | https://ror.org/057s3rs39 | SCR_013398 | Mabtech AB | 2026-08-01 12:04:58 | 3389 | ||||||||||
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DC Analysis programs Resource Report Resource Website 10+ mentions |
DC Analysis programs (RRID:SCR_013431) | software resource | These programs have been written over the last 20 years for analysis of our own results. They all do some things that are still not available in any commercial program. The programs are written in protected-mode 32-bit Fortran 90, with some assembler subroutines for fast graphics, and the Gino graphics library. Thus they are essentially DOS programs, though they are usually run from Windows, either via a desktop icon (the .ico files) or in the DOS box. The manuals (now in pdf format), have now all been collected into a single document, DCMANUALS.PDF, which should be downloaded, and the bits that you need can then be printed. Note that some sections are common to many or all programs, e.g. the notes on the graph and histogram drawing subroutines, and it is important to read this before using any of the programs (though there is a lot of online help (hit F1) for the graphics, and also in SCAN. Sponsor. Our work was supported by the Wellcome Trust (project grant 074491) and the Medical Research Council (programme grant G0400869). | has parent organization: University College London; London; United Kingdom | nif-0000-30411 | SCR_013431 | DOS | 2026-08-01 12:04:59 | 14 | ||||||||||
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RosettaDock Resource Report Resource Website 100+ mentions |
RosettaDock (RRID:SCR_013393) | RosettaDock | software resource | Predicts the structure of a protein-protein complex from the individual structures of the monomer components. |
is listed by: OMICtools has parent organization: Johns Hopkins University; Maryland; USA |
OMICS_01604 | SCR_013393 | 2026-08-01 12:04:48 | 118 | ||||||||||
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DSHB Resource Report Resource Website 5000+ mentions |
DSHB (RRID:SCR_013527) | institution | An antibody supplier which banks and distributes hybridomas and monoclonal antibodies for use in research. The bank includes antibodies against targets such as GFP, transcription factors, stem cells, and human. | antibody supplier, hybridoma, monoclonal, bank, developmental studies | is hosted by: University of Iowa; Iowa; USA | NICHD | Available to the research community, Acknowledgement requested | nlx_152343, grid.482683.3 | https://ror.org/006cer819 | SCR_013527 | Developmental Studies Hybridoma Bank, Developmental Studies Hybridoma Bank at the University of Iowa | 2026-08-01 12:04:59 | 5260 | ||||||
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Pairwise Conservation Scores - An Algorithm to Identify Conserved K-mers Resource Report Resource Website 1+ mentions |
Pairwise Conservation Scores - An Algorithm to Identify Conserved K-mers (RRID:SCR_013409) | PCS | software resource | A stand-alone package to identify and analyze conserved k-mers in pairwise alignment. This program shows high performance for identifying miRNA seed binding sites in 3''-UTRs. | perl, perl script, bio.tools |
is listed by: bio.tools is listed by: Debian has parent organization: Tsinghua University; Beijing; China |
biotools:pcs, nlx_33020 | https://bio.tools/pcs | http://bioinfo.au.tsinghua.edu.cn/member/~gujin/pcs/ | SCR_013409 | Pairwise Conservation Scores | 2026-08-01 12:04:59 | 3 | ||||||
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ArrayOligoSelector Resource Report Resource Website 10+ mentions |
ArrayOligoSelector (RRID:SCR_013494) | ArrayOligoSelector | software resource | Software program to systematically design gene specific long oligonucleotide probes for entire genomes, for the purpose of developing whole genome microarrays. For each open reading frame, the program optimizes the oligo selection based upon several parameters, including uniqueness in the genome, sequence complexity, lack of self-binding, GC content and proximity to the 3''end of the gene. |
is listed by: OMICtools has parent organization: University of California at San Francisco; California; USA has parent organization: SourceForge |
PMID:12620119 | Free, Public, Commercial requires license, Use of the blat or gfclient options requires license | OMICS_00826 | SCR_013494 | 2026-08-01 12:04:48 | 13 | ||||||||
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Engineering and Physical Sciences Research Council Resource Report Resource Website 10+ mentions |
Engineering and Physical Sciences Research Council (RRID:SCR_013495) | EPSRC | institution | EPSRC is the main UK government agency for funding research and training in engineering and the physical sciences, investing more than £850 million a year in a broad range of subjects from mathematics to materials science, and from information technology to structural engineering. We support research into engineering, mathematics, physics, chemistry, materials science, information and communications technologies. EPSRC is a non-departmental public body funded by the UK government through the Department for Universities, Innovation and Skills. We employ around 300 staff in Swindon. We manage our portfolio through programmes. Research base programmes focus on investigator-led research and training. Business innovation programmes deliver our priority research themes and maximise the economic and social impact of the research and training we fund. | ISNI: 0000 0004 0394 8681, Wikidata: Q5377871, Crossref funder ID: 501100000266, grid.421091.f, nlx_10253 | https://ror.org/0439y7842 | SCR_013495 | UK EPSRC | 2026-08-01 12:04:49 | 10 | |||||||||
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TreeView Resource Report Resource Website 1000+ mentions |
TreeView (RRID:SCR_013503) | TreeView | software resource | Software to graphically browse results of clustering and other analyses from Cluster. |
is listed by: OMICtools is listed by: Debian is listed by: SoftCite has parent organization: University of California at Berkeley; Berkeley; USA |
DOI:10.1093/bioinformatics/bth349 | OMICS_01574 | https://sources.debian.org/src/treeview/ | SCR_013503 | 2026-08-01 12:04:49 | 2742 | ||||||||
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ScanAlyze Resource Report Resource Website 10+ mentions |
ScanAlyze (RRID:SCR_013507) | ScanAlyze | software resource | Software to process fluorescent images of microarrays. |
is listed by: OMICtools has parent organization: University of California at Berkeley; Berkeley; USA |
OMICS_00846 | SCR_013507 | 2026-08-01 12:04:59 | 43 | ||||||||||
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CNV-seq Resource Report Resource Website 100+ mentions |
CNV-seq (RRID:SCR_013357) | CNV-seq | software resource | A method for detecting DNA copy number variation (CNV) using high-throughput sequencing., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian |
THIS RESOURCE IS NO LONGER IN SERVICE | biotools:cnv-seq, OMICS_00339 | https://bio.tools/cnv-seq | SCR_013357 | 2026-08-01 12:04:58 | 167 | |||||||
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MEDEA Resource Report Resource Website 100+ mentions |
MEDEA (RRID:SCR_013356) | MEDEA | software resource | THIS RESOURCE IS NO LONGER IN SERVCE, documented June, 2019.Comparative Genomic Visualization with Adobe Flash. |
is listed by: OMICtools has parent organization: Broad Institute |
THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_00941 | SCR_013356 | 2026-08-01 12:04:48 | 119 | |||||||||
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National Genotyping Center; Ile-de-France; France Resource Report Resource Website 1+ mentions |
National Genotyping Center; Ile-de-France; France (RRID:SCR_011412) | CNG | national laboratory | National genotyping center to advance research of the genetics of human diseases through internal and collaborative research programs. To this end they have developed a number of state-of-the-art genomics technology platforms and laboratories. Technology available at CNG ranges from a fully integrated high-throughput genotyping facility to a next generation sequencing platform. Activities include whole genome association studies (GWAS), pan-genomic expression profiling, epigenetic studies (DNA methylation, chromatin structure studies) and whole genome sequencing. All platforms, tools and know-how developed at CNG are open to outside groups for through collaborative research programs, and also applied by the Centre for its own research into the genetic basis of hereditary diseases. |
is related to: READNA has parent organization: CEA; Gif sur Yvette; France is parent organization of: READNA |
nlx_158239 | SCR_011412 | Centre National de Génotypage, Centre National de Genotypage, National Genotyping Center; Île-de-France; France | 2026-08-01 12:04:27 | 2 | |||||||||
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National Heart Lung and Blood Institute Resource Report Resource Website 50+ mentions |
National Heart Lung and Blood Institute (RRID:SCR_011413) | NHLBI | institution | NHLBI provides leadership for a national program in diseases of the heart, blood vessels, lung, and blood; blood resources; and sleep disorders. Since October 1997, the NHLBI has also had administrative responsibility for the NIH Woman''s Health Initiative. The Institute plans, conducts, fosters, and supports an integrated and coordinated program of basic research, clinical investigations and trials, observational studies, and demonstration and education projects. The National Heart, Lung, and Blood Institute (NHLBI) provides global leadership for a research, training, and education program to promote the prevention and treatment of heart, lung, and blood diseases and enhance the health of all individuals so that they can live longer and more fulfilling lives. The NHLBI stimulates basic discoveries about the causes of disease, enables the translation of basic discoveries into clinical practice, fosters training and mentoring of emerging scientists and physicians, and communicates research advances to the public. It creates and supports a robust, collaborative research infrastructure in partnership with private and public organizations, including academic institutions, industry, and other government agencies. The Institute collaborates with patients, families, health care professionals, scientists, professional societies, patient advocacy groups, community organizations, and the media to promote the application of research results and leverage resources to address public health needs. The NHLBI also collaborates with international organizations to help reduce the burden of heart, lung, and blood diseases worldwide. |
has parent organization: National Institutes of Health is parent organization of: Body Mass Index Calculator is parent organization of: ACCORD is parent organization of: National Heart Lung and Blood Institute Office of the Director is parent organization of: NHLBI Division of Blood Diseases and Resources is parent organization of: NHLBI Division of Cardiovascular Sciences is parent organization of: NHLBI Division of Intramural Research is parent organization of: Womens health initiative is parent organization of: NHLBI Division of Lung Diseases is parent organization of: Biologic Specimen and Data Repository Information Coordinating Center (BioLINCC) |
Crossref funder ID: 100000050, nlx_inv_1005097, Wikidata: Q6973027, grid.279885.9, ISNI: 0000 0001 2293 4638 | https://ror.org/012pb6c26 | SCR_011413 | National Heart Lung and Blood Institute | 2026-08-01 12:04:24 | 93 | ||||||||
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National Institutes of Health Resource Report Resource Website 1000+ mentions |
National Institutes of Health (RRID:SCR_011417) | NIH | institution | NIH is the nations medical research agency - making important medical discoveries that improve health and save lives. The National Institutes of Health (NIH), a part of the U.S. Department of Health and Human Services, is the primary Federal agency for conducting and supporting medical research. Helping to lead the way toward important medical discoveries that improve peoples health and save lives, NIH scientists investigate ways to prevent disease as well as the causes, treatments, and even cures for common and rare diseases. NIH research impacts: * child and teen health, * men's health, * minority health, * seniors' health, * women's health, and * wellness and lifestyle issues. Composed of 27 Institutes and Centers, the NIH provides leadership and financial support to researchers in every state and throughout the world. | granting agency, US Department of Health, medical research |
uses: ReadCube uses: Scizzle is related to: All About Grants Podcast is related to: Ranking Tables of NIH Funding to US Medical Schools in 2010 is related to: DMPTool has parent organization: United States Department of Health and Human Services granting agency is parent organization of: Human Genome Project Information is parent organization of: Cross Collaboration Initiatives at the NIH is parent organization of: GEOquery is parent organization of: Trans-Institute Angiogenesis Research Program is parent organization of: Collecting Duct Database is parent organization of: NIH Office of Research Services is parent organization of: ECRbase is parent organization of: NIH Worker Training Program is parent organization of: ACME is parent organization of: NIH Division of Nutrition Research Coordination is parent organization of: Research Services Branch National Institutes of Mental Health is parent organization of: NIH VideoCasting is parent organization of: Biositemaps is parent organization of: Neurofed is parent organization of: NeuronJ: An ImageJ Plugin for Neurite Tracing and Quantification is parent organization of: General Clinical Research Centers Program is parent organization of: Office of Intramural Training and Education is parent organization of: Mutant Mouse Resource and Research Center is parent organization of: NIH Image is parent organization of: Biomedical Information Science and Technology Initiative is parent organization of: NIH NeuroBioBank is parent organization of: NIH Human Pluripotent Stem Cell Registry is parent organization of: NIH MRI Study of Normal Brain Development is parent organization of: OppNet - Basic Behavioral and Social Science Opportunity Network is parent organization of: NIH Blueprint for Neuroscience Research is parent organization of: Kidney Health Initiative is parent organization of: Office of Rare Diseases Research is parent organization of: Center for Cancer Research is parent organization of: NIH Biospecimens Interest Group is parent organization of: NIH Neuroscience Microarray Consortium is parent organization of: Genomic Datasharing is parent organization of: Knockout Mouse Project is parent organization of: NIH Office of Science Education is parent organization of: BARD is parent organization of: StemCellDB is parent organization of: Jobs(at)NIH is parent organization of: Office of Extramural Research NIH is parent organization of: Office of Behavioral and Social Sciences Research is parent organization of: Prize4Life is parent organization of: NIH Pain Consortium is parent organization of: BRAIN Initiative is parent organization of: BTRIS: NIH Biomedical Translational Research Information System is parent organization of: NIH Human Connectome Project is parent organization of: Biowulf at the NIH is parent organization of: National Institutes of Neurological Disorders and Stroke Research Programs is parent organization of: REGARDS - REasons for Geographic and Racial Differences in Stroke is parent organization of: Model Organisms for Biomedical Research is parent organization of: Deltagen and Lexicon Knockout Mice and Phenotypic Data Resource is parent organization of: Brain Computer Interface 2000 Software Package is parent organization of: Cognitive and Emotional Health Project: The Healthy Brain is parent organization of: Cancer Chromosomes is parent organization of: X-linked SCID mutation database is parent organization of: Health Research Funding is parent organization of: Know Stroke Campaign is parent organization of: Comparative Vertebrate Sequencing is parent organization of: Phylogenetic Clusters of Orthologous Groups Ranking is parent organization of: PubMatrix is parent organization of: National Institutes of Health Stem Cell Tables is parent organization of: Allergen Database for Food Safety is parent organization of: Molecular Brain: Transcription Profiles of Mouse and Human Brains is parent organization of: Genetic and Rare Diseases Information Center is parent organization of: Molecular Libraries Program is parent organization of: BMAP - Brain Molecular Anatomy Project is parent organization of: CARDS Database is parent organization of: Office of logistics and acquisition operations is parent organization of: National Centers for Biomedical Computing is parent organization of: Center for Information Technology is parent organization of: Fogarty International Center is parent organization of: Genome association studies is parent organization of: National Cancer Institute is parent organization of: National Center for Complementary and Alternative Medicine is parent organization of: National Center for Research Resources is parent organization of: National Eye Institute (NEI) Commons is parent organization of: National Heart Lung and Blood Institute is parent organization of: National Human Genome Research Institute is parent organization of: National Institute of Biomedical Imaging and Bioengineering is parent organization of: National Institute of Child Health and Human Development is parent organization of: National Institute of Environmental Health Sciences is parent organization of: National Institute of Mental Health is parent organization of: National Institute of Nursing Research is parent organization of: National Institute on Aging is parent organization of: National Institute on Alcohol Abuse and Alcoholism is parent organization of: National Institute on Drug Abuse is parent organization of: National Institute on Minority Health and Health Disparities is parent organization of: National Library of Medicine is parent organization of: NIH Clinical Center is parent organization of: NIH Roadmap is parent organization of: Superfund basic research program is parent organization of: National Institute of Arthritis and Musculoskeletal and Skin Diseases is parent organization of: National Institute of Allergy and Infectious Diseases is parent organization of: NIH Office of the Director is parent organization of: NIH Common Fund is parent organization of: National Center for Advancing Translational Sciences is parent organization of: National Institute on Deafness and Other Communication Disorders is parent organization of: Office of research facilities development and operations is parent organization of: National Institute of General Medical Sciences is parent organization of: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases is parent organization of: AIDSinfo Drug Database is parent organization of: Human Microbiome Project is parent organization of: National Institute of Neurological Disorders and Stroke is parent organization of: NIH electronic Research Materials catalogue is parent organization of: Center for Scientific Review is parent organization of: Ontology-based Knowledgebase for Human Cell Adhesion Molecules is parent organization of: Chronic Fatigue Syndrome is parent organization of: National Institute of Health Data Book is parent organization of: NIH-CIDI Lung Segmentation Tool is parent organization of: NIH Pediatric MRI Data Repository is parent organization of: DICOMConvert is parent organization of: Accelerating Medicines Partnership is parent organization of: Biospecimen Research Database |
Available to the research community | nlx_inv_1005116, ISNI: 0000 0001 2297 5165, grid.94365.3d, Wikidata: Q390551, Crossref funder ID: 100000002 | https://ror.org/01cwqze88 | SCR_011417 | National Institutes of Health | 2026-08-01 12:04:24 | 3944 | ||||||
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National Institute of Agrobiological Sciences; Ibaraki; Japan Resource Report Resource Website 1+ mentions |
National Institute of Agrobiological Sciences; Ibaraki; Japan (RRID:SCR_011420) | NIAS, NIAR | institution | The largest agricultural research institute in Japan for basic life sciences focusing on understanding the biological phenomena of agriculturally important plants, insects, microbes and animals to create innovative technologies, and eventually contribute to the solution of global issues such as food shortage due to rapid population growth and environmental problems due to climate change. Research activities are pursued in a 5-year cycle to intensify all efforts towards a common goal and to forge the way for new breakthroughs with direct impact to agricultural productivity. |
is parent organization of: Rice Proteome Database is parent organization of: Animal Genome Database is parent organization of: PLACE- A Database of Plant Cis-acting Regulatory DNA Elements is parent organization of: RAP-DB |
nlx_156713, Crossref funder ID: 501100007419, grid.410590.9, ISNI: 0000 0001 0699 0373, Wikidata: Q11638022 | https://ror.org/01786mp71 | SCR_011420 | Institute of Agrobiological Sciences | 2026-08-01 12:04:25 | 1 | ||||||||
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National Institute of Biomedical Innovation; Osaka; Japan Resource Report Resource Website 1+ mentions |
National Institute of Biomedical Innovation; Osaka; Japan (RRID:SCR_011423) | NIBIO | government granting agency | is parent organization of: HOMSTRAD - Homologous Structure Alignment Database | SCR_011423 | National Institute of Biomedical Innovation | 2026-08-01 12:04:08 | 1 | |||||||||||
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National Institute of Informatics; Tokyo; Japan Resource Report Resource Website 1+ mentions |
National Institute of Informatics; Tokyo; Japan (RRID:SCR_011424) | NII | institution | is parent organization of: BioCaster | SCR_011424 | National Institute of Informatics | 2026-08-01 12:04:27 | 1 | |||||||||||
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National Institute of Child Health and Human Development Resource Report Resource Website 100+ mentions |
National Institute of Child Health and Human Development (RRID:SCR_011429) | NICHD | institution | A national institute that investigates human development throughout the entire life process, focusing on understanding developmental disabilities, including intellectual and developmental disabilities, and illuminating important events that occur during pregnancy. The NICHD conducts and supports laboratory research, clinical trials, and epidemiological studies that explore health processes; examines the impact of disabilities, diseases, and defects on the lives of individuals; and sponsors training programs for scientists, doctors, and researchers to ensure that NICHD research can continue. The Institute also supports research training across all its programs. In addition, an overarching responsibility of the NICHD is to disseminate information that emanates from Institute research programs to researchers, practitioners, other health care professionals, and the public. | human development, developmental disabilities, pregnancy, national institute |
has parent organization: NIH Blueprint for Neuroscience Research has parent organization: National Institutes of Health is parent organization of: NICHD Developmental Neuroethology - Laboratory of Comparative Ethology is parent organization of: TORTOISE is parent organization of: NCMRR - National Center for Medical Rehabilitation Research is parent organization of: GermSAGE is parent organization of: Traumatic Brain Injury Clinical Trials Network |
Available to the research community | nlx_inv_1005104, Crossref funder ID: 100000071, Wikidata: Q5409765, grid.420089.7, ISNI: 0000 0000 9635 8082 | https://ror.org/04byxyr05 | SCR_011429 | Eunice Kennedy Shriver National Institute of Child Health and Human Development | 2026-08-01 12:04:25 | 165 | ||||||
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National Institute of Mental Health and Neuro Sciences; Bangalore; India Resource Report Resource Website |
National Institute of Mental Health and Neuro Sciences; Bangalore; India (RRID:SCR_011432) | NIMHANS | institution | Institute of mental health and neuroscience in Bangalore, India. | mental health, neuroscience | is parent organization of: Bangalore Brain Bank | nlx_143652 | SCR_011432 | National Institute of Mental Health and Neuro Sciences | 2026-08-01 12:04:25 | 0 | ||||||||
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Saarland University; Saarbrucken; Germany Resource Report Resource Website |
Saarland University; Saarbrucken; Germany (RRID:SCR_011510) | university | Research university located in Saarbrücken, capital of German state of Saarland. It was founded in 1948 in Homburg in co-operation with France and is organized in six faculties that cover all major fields of science. |
is parent organization of: GeneTrail is parent organization of: IFOMIS is parent organization of: TissueAtlas |
Wikidata:Q700758, ISNI:0000 0001 2167 7588, grid.11749.3a, nlx_11044, Crossref funder ID:501100005690 | https://ror.org/01jdpyv68 | SCR_011510 | Saarland University | 2026-08-01 12:04:26 | 0 |
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