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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Chromeleon Chromatography Data System (CDS) Software Resource Report Resource Website 1+ mentions |
Chromeleon Chromatography Data System (CDS) Software (RRID:SCR_016874) | CDS | software toolkit, software resource | Software system to support chromatography operations, to ensure data quality and manage all the analytical processes from instrument control, to raw data storage and processing, through to generating the final results. | Thermofisher, system, chromatography, operation, data, quality, manage, analytical, process, instrument, control | Commercially available | SCR_016874 | Chromeleon Chromatography Data System, Chromeleon Chromatography Data System (CDS), Dionex Chromeleon7 | 2026-08-02 09:07:23 | 8 | |||||||||
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Bio-Rad: ZE5 Cell Analyzer Resource Report Resource Website 1+ mentions |
Bio-Rad: ZE5 Cell Analyzer (RRID:SCR_019712) | instrument resource | BioRad ZE5 was formerly known as the Propel Labs YETI Cytometer with configurations to meet broad range of experimental complexities and throughput needs. Accessible for novice flow cytometry users yet flexible enough for most experienced flow cytometry professionals. | Bio Rad, Cytometer, Instrument, Equipment, Usedit | Commercially available | SCR_019713, Model_Number_ZE5, SCR_019717 | SCR_019712 | , Bio-Rad ZE5 Cell Analyzer Flow Cytometer, BioRad ZE5, Bio-Rad ZE5/Yeti Cell Analyzer Flow Cytometer | 2026-08-03 09:37:13 | 6 | |||||||||
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Thermo Fisher: Applied Biosystems: GeneAmp 9700 PCR Thermocycler System Resource Report Resource Website 10+ mentions |
Thermo Fisher: Applied Biosystems: GeneAmp 9700 PCR Thermocycler System (RRID:SCR_018436) | instrument resource | Automated PCR instrument for automated amplification of nucleic acids with Polymerase Chain Reaction. It has reaction volumes of up to 50 uL and sample temperature range of 4 to 99.9 C. | Matrix Assisted Laser Desorption Ionization Time of Flight Instrument, Instrument, Equipment, Applied Biosystems, USEDit, ABRF | is listed by: USEDit | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018436.pdf | SCR_018448, SCR_019577, Model_Number_9700 | https://assets.thermofisher.com/TFS-Assets/LSG/manuals/cms_040970.pdf | SCR_018436 | 2026-08-03 09:37:02 | 13 | ||||||||
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Bruker Corporation Resource Report Resource Website 1+ mentions |
Bruker Corporation (RRID:SCR_017365) | material resource, instrument supplier | Commercial organization located in Massachusetts, USA, for scientific instruments and analytical and diagnostic solutions. Bruker equipment can be used in life science molecular research, in applied and pharma applications,microscopy, nano-analysis and industrial applications. Provider of high-performance systems for cell biology, preclinical imaging, clinical phenomics and proteomics research, clinical microbiology, and for molecular pathology research. | Manufacturer, corporation, commercial, instrument, analytical, diagnostic, equipment | SCR_017365 | 2026-08-03 09:37:02 | 3 | ||||||||||||
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Nikon: Eclipse E600 Fluorescence Microscope Resource Report Resource Website 1+ mentions |
Nikon: Eclipse E600 Fluorescence Microscope (RRID:SCR_018606) | instrument resource | Microscope equipped with CFI60 infinity optical system, providing images in all applications. Incorporates specifications adopted for CFI60 series objectives, including 60 millimeter parfocal distance, 25 millimeter thread size, and standard 22 millimeter field of view. Main components of CFI60 infinity optical system include objective, tube lens to converge light beam, and eyepiece lens to enlarge intermediate image. Fluorescence microscope that has detachable substage, 12 volt 100 watt tungsten halide lamp, filter magazine, and choice of sextuple nosepiece or sextuple DIC nosepiece.Has objectives for brightfield, darkfield, Nomarski DIC, epi fluorescence, or phase contrast techniques. | Camera, Instrument, Equipment, Nikon, USEDit, ABRF | Commercially available | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018606.pdf | , SCR_020322, SCR_020330, Model_Number_E600, SCR_018858 | https://gsecars.uchicago.edu/wp-content/uploads/2019/06/Nikon_E600-Instruction-manual.pdf | SCR_018606 | , Nikon Eclipse E600 Microscope | 2026-08-03 09:37:18 | 3 | |||||||
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GE: Biacore 3000 Real Time Biomolecular Interaction Analyzer Resource Report Resource Website 1+ mentions |
GE: Biacore 3000 Real Time Biomolecular Interaction Analyzer (RRID:SCR_018044) | instrument resource | Biacore 3000 processing unit is an established, label-free system for detailed studies of biomolecular interactions. The system delivers comprehensive characterization of the interaction, answers questions about the rate constants, affinity, specificity, and determines the active concentration of components. The ability to recover and transfer interaction partners directly to MALDI targets for identification and further characterization makes the system highly applicable to fast identification of unknown interactants. | ABRF, Real Time Biomolecular Interaction Analyzer, GE Healthcare, instrument, equipment | is listed by: USEDit | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018044.pdf | SCR_019676, SCR_018577, Model_Number_Biacore 3000 | https://www.ibps.sorbonne-universite.fr/ressources/documents/1/2276, Brochure-Biacore-3000.pdf | https://www.gelifesciences.com/en/us/shop/biacore-3000-goldseal-p-02795 | SCR_018044 | BIACORE 3000 GOLDSEAL, BiaCore 3000 Surface Plasmon Resonance | 2026-08-03 09:37:11 | 4 | |||||
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Atago: PAL-10S Pocket Refractometer Resource Report Resource Website |
Atago: PAL-10S Pocket Refractometer (RRID:SCR_018439) | instrument resource | Digital hand held pocket refractometer that measures urine specific gravity. It has measurement temperature of 10 to 35 C and sample volume of 0.3ml. | Pocket Refractometer, Instrument, Equipment, Atago, USEDit, ABRF | is listed by: USEDit | Commercially available | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018439.pdf | SCR_018449, SCR_019583, Model_Number_PAL_10S | https://www.novatech-usa.com/pdf/Atago%20PAL-10S%20Refractometer%20Datasheet.pdf | SCR_018439 | 2026-08-03 09:37:16 | 0 | |||||||
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JSU Environmental Toxicology Core Lab Resource Report Resource Website |
JSU Environmental Toxicology Core Lab (RRID:SCR_000884) | material resource, instrument supplier | A research laboratory and facility which supports research on environmental toxicology at Jackson State University. | environment, toxic, toxicology, equipment, instrument, technology |
is listed by: Eagle I has parent organization: Jackson State University; Mississippi; USA |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_156361 | SCR_000884 | Jackson State University Environmental Toxicology Lab | 2026-08-03 09:31:12 | 0 | ||||||||
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Agilent: 4200 TapeStation System Resource Report Resource Website 10+ mentions |
Agilent: 4200 TapeStation System (RRID:SCR_018435) | instrument resource | Benchtop genetic analyzer. Electrophoresis system for DNA and RNA sample quality control. It can be used for next generation sequencing or Biobank workflow. | Benchtop Genetic Analyzer, Instrument, Equipment, Agilent, USEDit, Next Generation Sequencing, ABRF, NGS | is listed by: USEDit | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_018435.pdf | Model_Number_4200 TapeStation, , SCR_018444, SCR_019398, SCR_019395 | https://www.agilent.com/cs/library/datasheets/public/5991-6029EN.pdf | SCR_018435 | , Agilent 4200 Tapestation Genetic Analyzer, Agilent 4200 TapeStation | 2026-08-04 09:44:21 | 40 | |||||||
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Beckman Coulter: Navios EX flow cytometer Resource Report Resource Website 1+ mentions |
Beckman Coulter: Navios EX flow cytometer (RRID:SCR_023797) | instrument resource | Designed specifically for clinical laboratory NAVIOS EX 10-color flow cytometer delivers performance with improved sample traceability and reporting functions. Navios EX has two optional ready-to-use IVD reagent systems, the Navios Tetra System for simultaneous identification and enumeration of T, B and NK lymphocytes and the ClearLLab 10C System – the first FDA cleared and CE marked integrated leukemia and lymphoma immunophenotyping system. | USEDit, instrument, equipment, flow cytometer, NAVIOS EX 10-color flow cytometer, | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_023797.pdf | SCR_023797 | 2026-08-04 09:45:21 | 1 | ||||||||||
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LFP Monitoring Resource Report Resource Website |
LFP Monitoring (RRID:SCR_024428) | instrument resource, software resource, source code | Low cost platform for multianimal chronic Local Field Potential video monitoring with Graphical User Interface for seizure detection and behavioral scoring. Enables chronic monitoring of several animals simultaneously, synchronizes bilateral local field potential and video streams in real time, and parses recorded data into manageable file sizes. Hardware solution leverages Intan and Open Ephys acquisition systems and software solution is implemented in Bonsai. Data are synchronized and parsed in Bonsai, allowing for flexibility and scalability of up to 128 channels per animal. The use of Intan adapter board for LFP video recordings allows compatibility with large variety of recording devices. Custom made electrodes and cables were components for the chronic LFP recordings. Used as acquisition system for long term video neurophysiology recordings. | OpenBehavior, acquisition system, long term video neurophysiology recordings, seizure detection, behavioral scoring, multianimal chronic Local Field Potential, video monitoring, LFP video recording, Graphical User Interface for seizure detection and behavioral scoring, Intan adapter board, Open Ephys acquisition system, Bonsai, custom made electrodes and cables, instrument, device, | is listed by: OpenBehavior | PMID:36192155 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/lfpmonitoring/ | SCR_024428 | Local Field Potential video Monitoring | 2026-08-04 09:45:31 | 0 | |||||||
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Eco-HAB Resource Report Resource Website |
Eco-HAB (RRID:SCR_021588) | instrument resource, portal, data or information resource, project portal | Portal provides open source, RFID-based system for automated measurement and analysis of social preference and in-cohort sociability in mice. System was developed by Nencki Institute of Experimental Biology scientists. | Instrument, murine social behavior, automated measurement, mice social preference, mice cohort sociability, social preference analysis, OpenBehavior |
is listed by: OpenBehavior has parent organization: Nencki Institute of Experimental Biology; Warsaw; Poland |
DOI:10.7554/elife.19532 | Free, Freely available | SCR_021588 | 2026-08-04 09:44:50 | 0 | |||||||||
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Oculomatic Eye Tracking project Resource Report Resource Website |
Oculomatic Eye Tracking project (RRID:SCR_021465) | instrument resource, portal, data or information resource, project portal | Project related to investigate mechanisms of oculomotor behavior.Included system is provided by New York University scientists to track eye movement.System includes camera module, lens, IR-Light source, mounting solution, data acquisition device, and general purpose PC. System consists of open source software and modular hardware solution to eye tracking for use in humans and non-human primates. | High speed eye tracking, Point Gray USB3.0 camera, Oculomatic Eye Tracking system, track eye movements, OpenBehavior, Instrument |
is listed by: OpenBehavior is related to: Oculomatic has parent organization: New York University; New York; USA |
DOI:10.1016/j.jneumeth.2016.06.016 | Free, Freely available | SCR_021465 | Oculomatic Eye Tracking | 2026-08-04 09:44:49 | 0 | ||||||||
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Moving Wall Box Resource Report Resource Website |
Moving Wall Box (RRID:SCR_021559) | instrument resource, portal, data or information resource, project portal | Portal provides Moving Wall Box system used to testing strategy task where mouse is repeatedly forced to jump over small ice by slowly moving walls whereby presence of animal is automatically sensed via balances and analyzed by microcontroller board which in turn controls movements of walls. Device provided by Max Planck Institute of Psychiatry scientist. Used for repeated assessment of fear coping strategies. | Instrument, behavioral inhibition, emotional challenging situation, OpenBehavior |
is listed by: OpenBehavior has parent organization: Max-Planck-Gesellschaft |
DOI:10.3389/fnbeh.2017.00201 | Free, Freely available | SCR_021559 | 2026-08-04 09:44:51 | 0 | |||||||||
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3DOC Resource Report Resource Website |
3DOC (RRID:SCR_021547) | instrument resource, portal, data or information resource, project portal | Project related to animals learned perform action in order to achieve reward. Fully 3D printable chamber able to perform operant conditioning using off-the-shelf, low-cost optical and electronic components, that can be reproduced rigorously in any laboratory equipped with 3D printer. | Instrument, operant conditioning, 3D printable chamber, OpenBehavior | is listed by: OpenBehavior | DOI:10.1523/eneuro.0502-19.2020 | Commercially available | SCR_021547 | 2026-08-04 09:44:50 | 0 | |||||||||
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PavCA project Resource Report Resource Website |
PavCA project (RRID:SCR_022508) | PavCA | topical portal, portal, data or information resource | Project related to tracking behavior. Used to identify subgroups of individuals that differentially attribute incentive value to food cue. Includes apparatus for studying Pavlovian conditioned approach behavior. Customized rat PavCA chambers are constructed based on modular devices purchased from Med-Associates. Code used to operate equipment and collect data was written using Med-Associates’ MEDSTATE programming language. This program is then loaded into Med-PC V operating program, also created by Med-Associates. | Behavior, behavior analysis, Pavlovian conditioning, apparatus, Pavlovian conditioned approach, Instrument, OpenBehavior |
is listed by: OpenBehavior has parent organization: University at Buffalo; New York; USA |
Free, Freely available | SCR_022508 | Pavlovian Conditioned Approach, PavCA | 2026-08-04 09:45:02 | 0 | ||||||||
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Timed pressure control hardware and software for delivery of air mediated distensions in animal models Resource Report Resource Website 1+ mentions |
Timed pressure control hardware and software for delivery of air mediated distensions in animal models (RRID:SCR_022363) | instrument resource, portal, data or information resource, project portal | System uses Arduino microcontroller to control relay module that operates solenoid valve which all sit in 3D printed housing. Solenoid works in conjunction with flowmeter regulator to allow for controlled flow of pressurized air into target. Timing of distensions is controlled via either custom Python based UI, or by triggered TTL pulse.Timed pressure control hardware and software used for delivery of air mediated distensions in animal models. | OpenBehavior, Instrument, behavior apparatus, delivery of air mediated distensions, animal models | is listed by: OpenBehavior | DOI:10.1016/J.OHX.2022.E00271 | Free, Freely available | https://osf.io/rs5p4 | SCR_022363 | Timed pressure control hardware and software for delivery of air mediated distensions in animal models project | 2026-08-04 09:45:00 | 1 | |||||||
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AutoStereota Resource Report Resource Website 1+ mentions |
AutoStereota (RRID:SCR_022330) | instrument resource, portal, data or information resource, project portal | Automated surgical instrument for brain tissue aspiration.Instrument for microendoscope implantation. Utilizes robotic control of needle connected to vacuum pump to aspirate brain tissue. System consists of robotic surgical instrument built around commercially available stereotaxic instrument and open source MATLAB-based GUI for control. | OpenBehavior, Instrument, brain tissue aspiration, microendoscope implantation | is listed by: OpenBehavior | DOI:10.1016/j.jneumeth.2018.10.013 | Free, Freely available | https://github.com/liang-bo/AutoStereota | SCR_022330 | 2026-08-04 09:44:59 | 2 | ||||||||
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Pi-based Remote Acquisition Technology for Motion Capture project Resource Report Resource Website |
Pi-based Remote Acquisition Technology for Motion Capture project (RRID:SCR_022325) | PiRATeMC | instrument resource, portal, data or information resource, project portal | Open source video recording system for acquiring video data that is scalable, flexible, and affordable.Utilizes Raspberry Pi (RPi) miniature computer and 8-megapixel Camera Board that allows for greater manipulation of recording parameters. System may be accessed on GitHub. | OpenBehavior, Instrument, behavior measurement, video analysis, realtime recording and analysis, video recording system, acquiring video data, open source recording system |
is listed by: OpenBehavior is related to: Pi-based Remote Acquisition Technology for Motion Capture |
DOI:10.1101/2021.07.23.453577 | Free, Freely available | SCR_022325 | Pi-based Remote Acquisition Technology for Motion Capture | 2026-08-04 09:45:04 | 0 | |||||||
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Raspberry Pi based auditory stimulus generator Resource Report Resource Website |
Raspberry Pi based auditory stimulus generator (RRID:SCR_022343) | instrument resource, portal, data or information resource, project portal | Stimulation system for auditory EEG experiments using Raspberry Pi3 B+ board, HiFiBerry audio card to enhance sound quality and trigger tone latency, and custom Python library to generate auditory stimuli. | OpenBehavior, Instrument, behavior apparatus, auditory stimuli generation for EEG studies | is listed by: OpenBehavior | DOI:10.1523/ENEURO.0524-20.2021 | Free, Freely available | https://github.com/PyOpenProto/PyOpenProto/tree/e-neuro2021 | SCR_022343 | Raspberry Pi based auditory stimulus generator project | 2026-08-04 09:45:04 | 0 |
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