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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Chromeleon Chromatography Data System (CDS) Software
 
Resource Report
Resource Website
1+ mentions
Chromeleon Chromatography Data System (CDS) Software (RRID:SCR_016874) CDS software toolkit, software resource Software system to support chromatography operations, to ensure data quality and manage all the analytical processes from instrument control, to raw data storage and processing, through to generating the final results. Thermofisher, system, chromatography, operation, data, quality, manage, analytical, process, instrument, control Commercially available SCR_016874 Chromeleon Chromatography Data System, Chromeleon Chromatography Data System (CDS), Dionex Chromeleon7 2026-08-02 09:07:23 8
Bio-Rad: ZE5 Cell Analyzer
 
Resource Report
Resource Website
1+ mentions
Bio-Rad: ZE5 Cell Analyzer (RRID:SCR_019712) instrument resource BioRad ZE5 was formerly known as the Propel Labs YETI Cytometer with configurations to meet broad range of experimental complexities and throughput needs. Accessible for novice flow cytometry users yet flexible enough for most experienced flow cytometry professionals. Bio Rad, Cytometer, Instrument, Equipment, Usedit Commercially available SCR_019713, Model_Number_ZE5, SCR_019717 SCR_019712 , Bio-Rad ZE5 Cell Analyzer Flow Cytometer, BioRad ZE5, Bio-Rad ZE5/Yeti Cell Analyzer Flow Cytometer 2026-08-03 09:37:13 6
Thermo Fisher: Applied Biosystems: GeneAmp 9700 PCR Thermocycler System
 
Resource Report
Resource Website
10+ mentions
Thermo Fisher: Applied Biosystems: GeneAmp 9700 PCR Thermocycler System (RRID:SCR_018436) instrument resource Automated PCR instrument for automated amplification of nucleic acids with Polymerase Chain Reaction. It has reaction volumes of up to 50 uL and sample temperature range of 4 to 99.9 C. Matrix Assisted Laser Desorption Ionization Time of Flight Instrument, Instrument, Equipment, Applied Biosystems, USEDit, ABRF is listed by: USEDit https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018436.pdf SCR_018448, SCR_019577, Model_Number_9700 https://assets.thermofisher.com/TFS-Assets/LSG/manuals/cms_040970.pdf SCR_018436 2026-08-03 09:37:02 13
Bruker Corporation
 
Resource Report
Resource Website
1+ mentions
Bruker Corporation (RRID:SCR_017365) material resource, instrument supplier Commercial organization located in Massachusetts, USA, for scientific instruments and analytical and diagnostic solutions. Bruker equipment can be used in life science molecular research, in applied and pharma applications,microscopy, nano-analysis and industrial applications. Provider of high-performance systems for cell biology, preclinical imaging, clinical phenomics and proteomics research, clinical microbiology, and for molecular pathology research. Manufacturer, corporation, commercial, instrument, analytical, diagnostic, equipment SCR_017365 2026-08-03 09:37:02 3
Nikon: Eclipse E600 Fluorescence Microscope
 
Resource Report
Resource Website
1+ mentions
Nikon: Eclipse E600 Fluorescence Microscope (RRID:SCR_018606) instrument resource Microscope equipped with CFI60 infinity optical system, providing images in all applications. Incorporates specifications adopted for CFI60 series objectives, including 60 millimeter parfocal distance, 25 millimeter thread size, and standard 22 millimeter field of view. Main components of CFI60 infinity optical system include objective, tube lens to converge light beam, and eyepiece lens to enlarge intermediate image. Fluorescence microscope that has detachable substage, 12 volt 100 watt tungsten halide lamp, filter magazine, and choice of sextuple nosepiece or sextuple DIC nosepiece.Has objectives for brightfield, darkfield, Nomarski DIC, epi fluorescence, or phase contrast techniques. Camera, Instrument, Equipment, Nikon, USEDit, ABRF Commercially available https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018606.pdf , SCR_020322, SCR_020330, Model_Number_E600, SCR_018858 https://gsecars.uchicago.edu/wp-content/uploads/2019/06/Nikon_E600-Instruction-manual.pdf SCR_018606 , Nikon Eclipse E600 Microscope 2026-08-03 09:37:18 3
GE: Biacore 3000 Real Time Biomolecular Interaction Analyzer
 
Resource Report
Resource Website
1+ mentions
GE: Biacore 3000 Real Time Biomolecular Interaction Analyzer (RRID:SCR_018044) instrument resource Biacore 3000 processing unit is an established, label-free system for detailed studies of biomolecular interactions. The system delivers comprehensive characterization of the interaction, answers questions about the rate constants, affinity, specificity, and determines the active concentration of components. The ability to recover and transfer interaction partners directly to MALDI targets for identification and further characterization makes the system highly applicable to fast identification of unknown interactants. ABRF, Real Time Biomolecular Interaction Analyzer, GE Healthcare, instrument, equipment is listed by: USEDit Restricted https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018044.pdf SCR_019676, SCR_018577, Model_Number_Biacore 3000 https://www.ibps.sorbonne-universite.fr/ressources/documents/1/2276, Brochure-Biacore-3000.pdf https://www.gelifesciences.com/en/us/shop/biacore-3000-goldseal-p-02795 SCR_018044 BIACORE 3000 GOLDSEAL, BiaCore 3000 Surface Plasmon Resonance 2026-08-03 09:37:11 4
Atago: PAL-10S Pocket Refractometer
 
Resource Report
Resource Website
Atago: PAL-10S Pocket Refractometer (RRID:SCR_018439) instrument resource Digital hand held pocket refractometer that measures urine specific gravity. It has measurement temperature of 10 to 35 C and sample volume of 0.3ml. Pocket Refractometer, Instrument, Equipment, Atago, USEDit, ABRF is listed by: USEDit Commercially available https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018439.pdf SCR_018449, SCR_019583, Model_Number_PAL_10S https://www.novatech-usa.com/pdf/Atago%20PAL-10S%20Refractometer%20Datasheet.pdf SCR_018439 2026-08-03 09:37:16 0
JSU Environmental Toxicology Core Lab
 
Resource Report
Resource Website
JSU Environmental Toxicology Core Lab (RRID:SCR_000884) material resource, instrument supplier A research laboratory and facility which supports research on environmental toxicology at Jackson State University. environment, toxic, toxicology, equipment, instrument, technology is listed by: Eagle I
has parent organization: Jackson State University; Mississippi; USA
THIS RESOURCE IS NO LONGER IN SERVICE nlx_156361 SCR_000884 Jackson State University Environmental Toxicology Lab 2026-08-03 09:31:12 0
Agilent: 4200 TapeStation System
 
Resource Report
Resource Website
10+ mentions
Agilent: 4200 TapeStation System (RRID:SCR_018435) instrument resource Benchtop genetic analyzer. Electrophoresis system for DNA and RNA sample quality control. It can be used for next generation sequencing or Biobank workflow. Benchtop Genetic Analyzer, Instrument, Equipment, Agilent, USEDit, Next Generation Sequencing, ABRF, NGS is listed by: USEDit https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_018435.pdf Model_Number_4200 TapeStation, , SCR_018444, SCR_019398, SCR_019395 https://www.agilent.com/cs/library/datasheets/public/5991-6029EN.pdf SCR_018435 , Agilent 4200 Tapestation Genetic Analyzer, Agilent 4200 TapeStation 2026-08-04 09:44:21 40
Beckman Coulter: Navios EX flow cytometer
 
Resource Report
Resource Website
1+ mentions
Beckman Coulter: Navios EX flow cytometer (RRID:SCR_023797) instrument resource Designed specifically for clinical laboratory NAVIOS EX 10-color flow cytometer delivers performance with improved sample traceability and reporting functions. Navios EX has two optional ready-to-use IVD reagent systems, the Navios Tetra System for simultaneous identification and enumeration of T, B and NK lymphocytes and the ClearLLab 10C System – the first FDA cleared and CE marked integrated leukemia and lymphoma immunophenotyping system. USEDit, instrument, equipment, flow cytometer, NAVIOS EX 10-color flow cytometer, Restricted https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_023797.pdf SCR_023797 2026-08-04 09:45:21 1
LFP Monitoring
 
Resource Report
Resource Website
LFP Monitoring (RRID:SCR_024428) instrument resource, software resource, source code Low cost platform for multianimal chronic Local Field Potential video monitoring with Graphical User Interface for seizure detection and behavioral scoring. Enables chronic monitoring of several animals simultaneously, synchronizes bilateral local field potential and video streams in real time, and parses recorded data into manageable file sizes. Hardware solution leverages Intan and Open Ephys acquisition systems and software solution is implemented in Bonsai. Data are synchronized and parsed in Bonsai, allowing for flexibility and scalability of up to 128 channels per animal. The use of Intan adapter board for LFP video recordings allows compatibility with large variety of recording devices. Custom made electrodes and cables were components for the chronic LFP recordings. Used as acquisition system for long term video neurophysiology recordings. OpenBehavior, acquisition system, long term video neurophysiology recordings, seizure detection, behavioral scoring, multianimal chronic Local Field Potential, video monitoring, LFP video recording, Graphical User Interface for seizure detection and behavioral scoring, Intan adapter board, Open Ephys acquisition system, Bonsai, custom made electrodes and cables, instrument, device, is listed by: OpenBehavior PMID:36192155 Free, Available for download, Freely available https://edspace.american.edu/openbehavior/project/lfpmonitoring/ SCR_024428 Local Field Potential video Monitoring 2026-08-04 09:45:31 0
Eco-HAB
 
Resource Report
Resource Website
Eco-HAB (RRID:SCR_021588) instrument resource, portal, data or information resource, project portal Portal provides open source, RFID-based system for automated measurement and analysis of social preference and in-cohort sociability in mice. System was developed by Nencki Institute of Experimental Biology scientists. Instrument, murine social behavior, automated measurement, mice social preference, mice cohort sociability, social preference analysis, OpenBehavior is listed by: OpenBehavior
has parent organization: Nencki Institute of Experimental Biology; Warsaw; Poland
DOI:10.7554/elife.19532 Free, Freely available SCR_021588 2026-08-04 09:44:50 0
Oculomatic Eye Tracking project
 
Resource Report
Resource Website
Oculomatic Eye Tracking project (RRID:SCR_021465) instrument resource, portal, data or information resource, project portal Project related to investigate mechanisms of oculomotor behavior.Included system is provided by New York University scientists to track eye movement.System includes camera module, lens, IR-Light source, mounting solution, data acquisition device, and general purpose PC. System consists of open source software and modular hardware solution to eye tracking for use in humans and non-human primates. High speed eye tracking, Point Gray USB3.0 camera, Oculomatic Eye Tracking system, track eye movements, OpenBehavior, Instrument is listed by: OpenBehavior
is related to: Oculomatic
has parent organization: New York University; New York; USA
DOI:10.1016/j.jneumeth.2016.06.016 Free, Freely available SCR_021465 Oculomatic Eye Tracking 2026-08-04 09:44:49 0
Moving Wall Box
 
Resource Report
Resource Website
Moving Wall Box (RRID:SCR_021559) instrument resource, portal, data or information resource, project portal Portal provides Moving Wall Box system used to testing strategy task where mouse is repeatedly forced to jump over small ice by slowly moving walls whereby presence of animal is automatically sensed via balances and analyzed by microcontroller board which in turn controls movements of walls. Device provided by Max Planck Institute of Psychiatry scientist. Used for repeated assessment of fear coping strategies. Instrument, behavioral inhibition, emotional challenging situation, OpenBehavior is listed by: OpenBehavior
has parent organization: Max-Planck-Gesellschaft
DOI:10.3389/fnbeh.2017.00201 Free, Freely available SCR_021559 2026-08-04 09:44:51 0
3DOC
 
Resource Report
Resource Website
3DOC (RRID:SCR_021547) instrument resource, portal, data or information resource, project portal Project related to animals learned perform action in order to achieve reward. Fully 3D printable chamber able to perform operant conditioning using off-the-shelf, low-cost optical and electronic components, that can be reproduced rigorously in any laboratory equipped with 3D printer. Instrument, operant conditioning, 3D printable chamber, OpenBehavior is listed by: OpenBehavior DOI:10.1523/eneuro.0502-19.2020 Commercially available SCR_021547 2026-08-04 09:44:50 0
PavCA project
 
Resource Report
Resource Website
PavCA project (RRID:SCR_022508) PavCA topical portal, portal, data or information resource Project related to tracking behavior. Used to identify subgroups of individuals that differentially attribute incentive value to food cue. Includes apparatus for studying Pavlovian conditioned approach behavior. Customized rat PavCA chambers are constructed based on modular devices purchased from Med-Associates. Code used to operate equipment and collect data was written using Med-Associates’ MEDSTATE programming language. This program is then loaded into Med-PC V operating program, also created by Med-Associates. Behavior, behavior analysis, Pavlovian conditioning, apparatus, Pavlovian conditioned approach, Instrument, OpenBehavior is listed by: OpenBehavior
has parent organization: University at Buffalo; New York; USA
Free, Freely available SCR_022508 Pavlovian Conditioned Approach, PavCA 2026-08-04 09:45:02 0
Timed pressure control hardware and software for delivery of air mediated distensions in animal models
 
Resource Report
Resource Website
1+ mentions
Timed pressure control hardware and software for delivery of air mediated distensions in animal models (RRID:SCR_022363) instrument resource, portal, data or information resource, project portal System uses Arduino microcontroller to control relay module that operates solenoid valve which all sit in 3D printed housing. Solenoid works in conjunction with flowmeter regulator to allow for controlled flow of pressurized air into target. Timing of distensions is controlled via either custom Python based UI, or by triggered TTL pulse.Timed pressure control hardware and software used for delivery of air mediated distensions in animal models. OpenBehavior, Instrument, behavior apparatus, delivery of air mediated distensions, animal models is listed by: OpenBehavior DOI:10.1016/J.OHX.2022.E00271 Free, Freely available https://osf.io/rs5p4 SCR_022363 Timed pressure control hardware and software for delivery of air mediated distensions in animal models project 2026-08-04 09:45:00 1
AutoStereota
 
Resource Report
Resource Website
1+ mentions
AutoStereota (RRID:SCR_022330) instrument resource, portal, data or information resource, project portal Automated surgical instrument for brain tissue aspiration.Instrument for microendoscope implantation. Utilizes robotic control of needle connected to vacuum pump to aspirate brain tissue. System consists of robotic surgical instrument built around commercially available stereotaxic instrument and open source MATLAB-based GUI for control. OpenBehavior, Instrument, brain tissue aspiration, microendoscope implantation is listed by: OpenBehavior DOI:10.1016/j.jneumeth.2018.10.013 Free, Freely available https://github.com/liang-bo/AutoStereota SCR_022330 2026-08-04 09:44:59 2
Pi-based Remote Acquisition Technology for Motion Capture project
 
Resource Report
Resource Website
Pi-based Remote Acquisition Technology for Motion Capture project (RRID:SCR_022325) PiRATeMC instrument resource, portal, data or information resource, project portal Open source video recording system for acquiring video data that is scalable, flexible, and affordable.Utilizes Raspberry Pi (RPi) miniature computer and 8-megapixel Camera Board that allows for greater manipulation of recording parameters. System may be accessed on GitHub. OpenBehavior, Instrument, behavior measurement, video analysis, realtime recording and analysis, video recording system, acquiring video data, open source recording system is listed by: OpenBehavior
is related to: Pi-based Remote Acquisition Technology for Motion Capture
DOI:10.1101/2021.07.23.453577 Free, Freely available SCR_022325 Pi-based Remote Acquisition Technology for Motion Capture 2026-08-04 09:45:04 0
Raspberry Pi based auditory stimulus generator
 
Resource Report
Resource Website
Raspberry Pi based auditory stimulus generator (RRID:SCR_022343) instrument resource, portal, data or information resource, project portal Stimulation system for auditory EEG experiments using Raspberry Pi3 B+ board, HiFiBerry audio card to enhance sound quality and trigger tone latency, and custom Python library to generate auditory stimuli. OpenBehavior, Instrument, behavior apparatus, auditory stimuli generation for EEG studies is listed by: OpenBehavior DOI:10.1523/ENEURO.0524-20.2021 Free, Freely available https://github.com/PyOpenProto/PyOpenProto/tree/e-neuro2021 SCR_022343 Raspberry Pi based auditory stimulus generator project 2026-08-04 09:45:04 0

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