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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Authority Synonyms Record Last Update Mentions Count
Autonomous Training of a Forelimb Motor Task project
 
Resource Report
Resource Website
Autonomous Training of a Forelimb Motor Task project (RRID:SCR_021562) data or information resource, instrument resource, portal, project portal Portal related to individualized tracking of self directed motor learning in group housed mice performing skilled lever positioning task in home cage. Provides system for fully autonomous training of group housed mice on forelimb motor task. Task is run and controlled by Raspberry Pi microcomputer, which allows for cages to be monitored remotely through active internet connection. System was developed by University of Ottawa scientists. Instrument, individualized tracking, self directed motor learning, group housed mice, skilled lever positioning task, home cage, forelimb motor task, OpenBehavior is listed by: OpenBehavior
is related to: Autonomous Training of a Forelimb Motor Task
has parent organization: University of Ottawa; Ontario; Canada
DOI:10.1152/jn.00115.2017 Free, Freely available SCR_021562 SciCrunch Registry Autonomous Training of a Forelimb Motor Task 2026-09-26 02:16:57 0
FlyPi
 
Resource Report
Resource Website
FlyPi (RRID:SCR_021563) data or information resource, instrument resource, portal, project portal Portal provides open source and affordable microscope experimental setup device based on Raspberry Pi, Arduino microcontroller and off-the-shelf electronic components. System design is based on 3D-printed mainframe, Raspberry Pi computer, and high definition camera system as well as Arduino based optical and thermal control circuits. All functions of FlyPi can be controlled through custom written graphical user interface. Instrument, microscope experimental system, Raspberry Pi, Arduino microcontroller, high definition camera system, Arduino, optical control circuits, thermal control circuits, OpenBehavior is listed by: OpenBehavior DOI:10.1371/journal.pbio.2002702 Free, Freely available SCR_021563 SciCrunch Registry 2026-09-26 02:16:57 0
Teensy-Based Interface project
 
Resource Report
Resource Website
Teensy-Based Interface project (RRID:SCR_021560) data or information resource, instrument resource, portal, project portal Portal provides Teensy-Based Interface system. System includes Teensy 3.2 microcontroller based interface that is easily programmable, and offers high speed, precisely timed behavioral data acquisition and digital and analog outputs for controlling sCMOS cameras and other devices. Developed by Boston University scientists. Instrument, Teensy microcontrollers, Teensy interface, sCMOS camera, camera control, behavioral experiments, OpenBehavior is listed by: OpenBehavior
is related to: Teensy-Based Interface
has parent organization: Boston University; Massachusetts; USA
DOI:10.1016/j.jneumeth.2019.03.019 Free, Freely available SCR_021560 SciCrunch Registry Teensy-Based Interface 2026-09-26 02:16:56 0
Airtrack
 
Resource Report
Resource Website
1+ mentions
Airtrack (RRID:SCR_021561) data or information resource, instrument resource, portal, project portal Portal provides head fixed behavioral environment that uses lightweight physical maze floating on air table that moves around animals body under direct control of animal itself. Instrument, head fixed, behavioral environment, lightweight physical maze, maze floating on air table, table moves around animal, real world floating environment, OpenBehavior is listed by: OpenBehavior
has parent organization: Humboldt University of Berlin; Berlin; Germany
DOI:10.1152/jn.00088.2016 Free, Freely available SCR_021561 SciCrunch Registry 2026-09-26 02:16:56 1
DIY Rodent Running Disk
 
Resource Report
Resource Website
DIY Rodent Running Disk (RRID:SCR_021558) data or information resource, instrument resource, portal, project portal Portal related to Rodent Running Disk. Provided Rodent Running Disk was developed by University of California, Berkeley scientist. Acrylic disk mounted to optical encoder to achieve fast locomotion decoding. Instrument, rodent running disk, acrylic disk, OpenBehavior is listed by: OpenBehavior
has parent organization: University of California at Berkeley; Berkeley; USA
DOI:10.1016/j.neuron.2017.12.021 Free, Freely available SCR_021558 SciCrunch Registry 2026-09-26 02:16:57 0
SignalBuddy
 
Resource Report
Resource Website
1+ mentions
SignalBuddy (RRID:SCR_021553) data or information resource, instrument resource, portal, project portal Portal related to signal generation. Provided system was developed by Columbia University scientists. System includes signal generator for scientific applications which generates digital or true analog signals (sine waves, step functions, and pulse trains) and can be controlled with intuitive serial monitor interface. Instrument, signal generator, sine waves, step functions, pulse trains, OpenBehavior is listed by: OpenBehavior
has parent organization: Columbia University; New York; USA
Free, Freely available SCR_021553 SciCrunch Registry 2026-09-26 02:16:57 1
Craniobot project
 
Resource Report
Resource Website
Craniobot project (RRID:SCR_021573) data or information resource, instrument resource, portal, project portal Portal provides computer numerical controlled robot for cranial microsurgeries developed by University of Minnesota scientist. Included cranial microsurgery platform combines automated skull surface profiling with computer numerical controlled milling machine to perform variety of cranial microsurgical procedures on mice. Instrument, removing skull sections, access brain, computer numerical controlled robot, cranial microsurgeries robot, OpenBehavior is listed by: OpenBehavior
is related to: craniobot
has parent organization: University of Minnesota Twin Cities; Minnesota; USA
DOI:10.1038/s41598-018-37073-w Free, Freely available SCR_021573 SciCrunch Registry Craniobot 2026-09-26 02:16:57 0
pyControl project
 
Resource Report
Resource Website
pyControl project (RRID:SCR_021574) data or information resource, instrument resource, portal, project portal Portal provides system that combines open source hardware and software for control of behavioral experiments. Open source framework, combines Python scripts and Micropython microcontroller. Framework can be run through command line interface, or in user friendly graphical user interface that allows users to manage variety of devices such as nose pokes, LED drivers, stepper motor controllers and more. Data collected using this system can then be imported into Python for data analysis. Instrument, Micropython microcontroller, Python scripts, behavioral experiment control, OpenBehavior is listed by: OpenBehavior
is related to: pyControl
Free, Freely available SCR_021574 SciCrunch Registry pyControl system 2026-09-26 02:16:57 0
PhotometryBox
 
Resource Report
Resource Website
PhotometryBox (RRID:SCR_021571) data or information resource, instrument resource, portal, project portal Portal provides open source control system for in vivo fluorescence measurements from deep brain structures developed by University of California, San Francisco scientists. Microcontroller based solution for controlling optical components in intracranial photometry system and processing resulting signal. Instrument, fluorescence measurements, deep brain structures, optical fibers, intracranial photometry system, OpenBehavior is listed by: OpenBehavior
has parent organization: University of California at San Francisco; California; USA
DOI:10.1016/j.jneumeth.2018.10.022 Free, Freely available SCR_021571 SciCrunch Registry 2026-09-26 02:16:57 0
Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology project
 
Resource Report
Resource Website
Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology project (RRID:SCR_021572) HOPE data or information resource, instrument resource, portal, project portal Portal provides brain implant developed by MIT scientists. Implant carries 16 movable tetrodes along with two optic fibers or two injection cannulas. Designed with help of 3D CAD software, allowing modifications for various experimental needs, such as targeting different brain regions and use in other animal species (e.g., rats and non-human primates). Implant can be designed to shape of skull of individual monkeys based on pre-implantation magnetic resonance imaging, thus optimizing fit with skull surface and making recording from deep brain regions more reliable. Instrument, neural implant, brain implant, manipulate neuronal activity, OpenBehavior is listed by: OpenBehavior
is related to: Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology
has parent organization: Massachusetts Institute of Technology; Massachusetts; USA;
DOI:10.3389/fncir.2018.00041 Free, Freely available SCR_021572 SciCrunch Registry Pharmacology, and Electrophysiology, Hybrid-drive combining Optogenetics, Hybrid drive combining Optogenetics 2026-09-26 02:16:58 0
CerebraLux
 
Resource Report
Resource Website
CerebraLux (RRID:SCR_021570) data or information resource, instrument resource, portal, project portal Portal provides low cost, open source, wireless probe for optogenetic stimulation. This wireless system for optogenetic stimulation was developed by UCLA scientists. Device consists of two parts. Optical component is mounted on head permanently, whereas electronic component is removable and is applied for each experiment. Device is controlled via custom GUI (built with the TkInter Python 2.7 library) which sends pulses to device via Arduino Uno. Instrument, optogenetic stimulation, wireless system, OpenBehavior is listed by: OpenBehavior
has parent organization: University of California at Los Angeles; California; USA
DOI:10.1117/1.nph.4.4.045001 Free, Freely available SCR_021570 SciCrunch Registry 2026-09-26 02:16:57 0
Nose Poke Device
 
Resource Report
Resource Website
Nose Poke Device (RRID:SCR_021568) data or information resource, instrument resource, portal, project portal Portal provides arduino based, 3D-printed nose poke device for rats. Includes set of instructions on how to build this device using arduino, some 3D printed parts and some off-the-shelf electronic components. Instrument, nose poke device, device for rats, arduino, 3D printed parts, electronic components, OpenBehavior is listed by: OpenBehavior
is related to: poke device arduino
Free, Freely available SCR_021568 SciCrunch Registry 2026-09-26 02:16:57 0
Pearce Lab Syringe Pump project
 
Resource Report
Resource Website
Pearce Lab Syringe Pump project (RRID:SCR_021566) data or information resource, instrument resource, portal, project portal Open source syringe pump apparatus developed by scientists from Michigan Technological University. Syringe pump is designed using freely available open source computer aided design (CAD) software and manufactured using open source RepRap 3-D printer and readily available parts. Instrument, syringe pump apparatus, OpenBehavior is listed by: OpenBehavior
is related to: linear actuator
has parent organization: Michigan Technological University; Houghton; USA
DOI:10.1371/journal.pone.0107216 Free, Freely available SCR_021566 SciCrunch Registry Pearce Lab Syringe Pump 2026-09-26 02:16:57 0
Operant Box for Auditory Tasks project
 
Resource Report
Resource Website
Operant Box for Auditory Tasks project (RRID:SCR_021564) data or information resource, instrument resource, portal, project portal Portal provides operant box designed to train small primates in auditory tasks.Device is based on computer and Arduino Mega 2560 board, named OBAT (Operant Box for Auditory Tasks), designed to present two different auditory stimuli to small primates.All schematics and software source code are available. Instrument, operant box, train small primates, auditory tasks, OpenBehavior is listed by: OpenBehavior
is related to: Operant Box for Auditory Tasks
DOI:10.3758/s13428-017-0906-6 Free, Freely available SCR_021564 SciCrunch Registry Operant Box for Auditory Tasks 2026-09-26 02:16:57 0
Rodent Operant Bucket project
 
Resource Report
Resource Website
Rodent Operant Bucket project (RRID:SCR_021565) data or information resource, instrument resource, portal, project portal Portal for open source operant chamber, based on Arduino microcontroller platform, that can be used to train mice to respond for reward. Designed by NIDDK scientists.Apparatus contains two nose pokes, drinking well, and solenoid controlled sucrose delivery system. Chamber can run magazine training, fixed ratio and progressive ratio training schedules, and can be programmed to run more complicated behavioral paradigms. Instrument, operant chamber, Arduino microcontroller platform, train mice, reward respond, OpenBehavior is listed by: OpenBehavior
is related to: NIDDK- National Institute of Diabetes and Digestive and Kidney Diseases Obesity Resources
is related to: Rodent Operant Bucket
DOI:10.3758/s13428-015-0603-2 Free, Freely available SCR_021565 SciCrunch Registry Rodent Operant Bucket, ROBucket 2026-09-26 02:16:57 0
OpenFeeder
 
Resource Report
Resource Website
OpenFeeder (RRID:SCR_021552) data or information resource, instrument resource, portal, project portal Project related to studying reward and feeding behavior. Provides open source automatic feeding system that can be customized for food types from seeds to pellets.System integrates plexiglass tubes, Arduino Uno, motor driver, and piezo sensor to reliably deliver accurate amounts of food, and can also be built using 3D printed parts. Instrument, automatic feeding system, customized for food types, plexiglass tubes, Arduino Uno, motor driver, piezo sensor, deliver accurate amounts of food, 3D printed parts, OpenBehavior is listed by: OpenBehavior DOI:10.1016/j.ohx.2016.09.001 Free, Freely available SCR_021552 SciCrunch Registry 2026-09-26 02:16:56 0
ToneBox
 
Resource Report
Resource Website
ToneBox (RRID:SCR_021548) data or information resource, instrument resource, portal, project portal Project related to auditory behavioral task data collection.Provided high throughput operant conditioning in mouse homecage system was developed by University of Maryland,College Park, scientists.Automated system for training up to hundreds of mice in auditory behavioral task features custom Matlab GUI running on desktop which connects to Raspberry Pi to administer auditory stimuli from USB soundcard and collects auditory data as well as licking data from water spout with commercially available capacitive sensors. Parts list and build instructions are readily available from paper and associated GitHub repository. Instrument, auditory behavioral task, automated system, training mice, auditory behavioral task, OpenBehavior is listed by: OpenBehavior
has parent organization: University of Maryland; Maryland; USA
DOI:10.1523/eneuro.0121-19.2019 Free, Freely available SCR_021548 SciCrunch Registry 2026-09-26 02:16:57 0
Eco-HAB
 
Resource Report
Resource Website
Eco-HAB (RRID:SCR_021588) data or information resource, instrument resource, portal, project portal Portal provides open source, RFID-based system for automated measurement and analysis of social preference and in-cohort sociability in mice. System was developed by Nencki Institute of Experimental Biology scientists. Instrument, murine social behavior, automated measurement, mice social preference, mice cohort sociability, social preference analysis, OpenBehavior is listed by: OpenBehavior
has parent organization: Nencki Institute of Experimental Biology; Warsaw; Poland
DOI:10.7554/elife.19532 Free, Freely available SCR_021588 SciCrunch Registry 2026-09-26 02:17:17 0
Oculomatic Eye Tracking project
 
Resource Report
Resource Website
Oculomatic Eye Tracking project (RRID:SCR_021465) data or information resource, instrument resource, portal, project portal Project related to investigate mechanisms of oculomotor behavior.Included system is provided by New York University scientists to track eye movement.System includes camera module, lens, IR-Light source, mounting solution, data acquisition device, and general purpose PC. System consists of open source software and modular hardware solution to eye tracking for use in humans and non-human primates. High speed eye tracking, Point Gray USB3.0 camera, Oculomatic Eye Tracking system, track eye movements, OpenBehavior, Instrument is listed by: OpenBehavior
is related to: Oculomatic
has parent organization: New York University; New York; USA
DOI:10.1016/j.jneumeth.2016.06.016 Free, Freely available SCR_021465 SciCrunch Registry Oculomatic Eye Tracking 2026-09-26 02:17:17 0
Moving Wall Box
 
Resource Report
Resource Website
Moving Wall Box (RRID:SCR_021559) data or information resource, instrument resource, portal, project portal Portal provides Moving Wall Box system used to testing strategy task where mouse is repeatedly forced to jump over small ice by slowly moving walls whereby presence of animal is automatically sensed via balances and analyzed by microcontroller board which in turn controls movements of walls. Device provided by Max Planck Institute of Psychiatry scientist. Used for repeated assessment of fear coping strategies. Instrument, behavioral inhibition, emotional challenging situation, OpenBehavior is listed by: OpenBehavior
has parent organization: Max-Planck-Gesellschaft
DOI:10.3389/fnbeh.2017.00201 Free, Freely available SCR_021559 SciCrunch Registry 2026-09-26 02:17:17 0

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