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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Kyoto Stock Center Resource Report Resource Website 1+ mentions |
Kyoto Stock Center (RRID:SCR_008469) | DGGR | organism supplier, material resource, biomaterial supply resource | Organism supplier which collects Drosophila stocks from laboratories all over the world, maintains them, and provides them to researchers upon request. | RIN, Resource Information Network, organism supplier, drosophila, genomics, genetic resource |
is used by: Integrated Animals is listed by: Resource Information Network |
Available to the research community | nif-0000-30415 | SCR_008469 | Drosophila Genomics and Genetic Resources, Drosophila Genetic Resource Center, The Drosophila Genetic Resource Center, Kyoto DGGR | 2025-05-15 10:39:13 | 1 | |||||||
|
Clocklab Resource Report Resource Website 500+ mentions |
Clocklab (RRID:SCR_014309) | software resource, data analysis software, standalone software, software application, data acquisition software, data processing software | Point and click program used to quickly analyse circadian activity data using algorithms and embedded controls to make every graph interactive and useful for data analysis. The analysis program has been used for a variety of species including mice, hamsters, rats, sheep, Drosophila, and humans. This program has three separate applications: one for data collection, one for analysis, and a chamber control program. | circadian activity data, interactive, data analysis software, data acquisition software, standalone software | is listed by: SoftCite | Pay for product, Users can order different components of ClockLab separately | SCR_014309 | 2025-05-15 10:40:31 | 511 | ||||||||||
|
CRCView Resource Report Resource Website |
CRCView (RRID:SCR_007092) | CRCView | production service resource, analysis service resource, data analysis service, service resource | Web-based microarray data analysis and visualization system powered by CRC, or Chinese Restaurant cluster, a Dirichlet process model-based clustering algorithm recently developed by Dr. Steve Qin. It also incorporates several gene expression analysis programs from Bioconductor, including GOStats, genefilter, and Heatplus. CRCView also installs from the Bioconductor system 78 annotation libraries of microarray chips for human (31), mouse (24), rat (14), zebrafish (1), chicken (1), Drosophila (3), Arabidopsis (2), Caenorhabditis elegans (1), and Xenopus Laevis (1). CRCView allows flexible input data format, automated model-based CRC clustering analysis, rich graphical illustration, and integrated Gene Ontology (GO)-based gene enrichment for efficient annotation and interpretation of clustering results. CRC has the following features comparing to other clustering tools: 1) able to infer number of clusters, 2) able to cluster genes displaying time-shifted and/or inverted correlations, 3) able to tolerate missing genotype data and 4) provide confidence measure for clusters generated. You need to register for an account in the system to store your data and analyses. The data and results can be visited again anytime you log in. | microarray, gene expression, cluster, gene, expression profile, data repository, bio.tools |
is listed by: bio.tools is listed by: Debian is related to: Bioconductor is related to: Gene Ontology has parent organization: University of Michigan; Ann Arbor; USA |
University of Michigan; Michigan; USA ; Institutional Fund ; NIH U013422; NIAID 1R21AI057875-01 |
PMID:17485426 | Registration required | biotools:crcview, nlx_99864 | https://bio.tools/crcview | http://helab.bioinformatics.med.umich.edu/crcview/ | SCR_007092 | Chinese Restaurant ClusterView | 2025-05-15 10:38:46 | 0 | |||
|
Smart Dictionary Lookup Resource Report Resource Website |
Smart Dictionary Lookup (RRID:SCR_000568) | Smart Dictionary Lookup | data or information resource, database, service resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 9, 2022. System that retrieves relevant UniProt IDs from BioThesaurus entries using a soft string matching algorithm. | gene, protein |
uses: UniProt uses: BioThesaurus is listed by: OMICtools has parent organization: University of Manchester; Manchester; United Kingdom |
PMID:17698493 | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_01198 | SCR_000568 | 2025-05-15 10:35:49 | 0 |
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