Searching the RRID Resource Information Network

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes

Preparing word cloud

×

SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

Search

Type in a keyword to search

Filter by records added date
See new records

Options


Current Facets and Filters

  • Organism:plant (facet)

Facets


Recent searches

Snippet view Table view
Click the to add this resource to a Collection

73 Results - per page

Show More Columns | Download 73 Result(s)

Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
RIKEN BioResource Center
 
Resource Report
Resource Website
1000+ mentions
RIKEN BioResource Center (RRID:SCR_003250) BRC, RIKEN BRC biomaterial supply resource, material resource, organism supplier RIKEN BRC contributes to advancement of life science research by collecting, preserving and distributing biological resources such as experimental animals, experimental plants, cultured cell lines, genetic materials (DNA), and associated bioinformatics. The RIKEN BRC develops novel bioresources to promote scientific research and new technologies to increase the value of bioresources, and also to implement effective procedures for the preservation, quality control and usage of bioresources. The RIKEN BRC is working closely with institutions in Japan and abroad. RIN, Resource Information Network, experimental animal, experimental plant, cultured cell line, dna, animal, plant, cell line, genetic material, virus, gene, cultured cell, embryo, sperm, tissue, organ, seed, cell, recombinant host, bioresource, FASEB list, RRID Community Authority is listed by: One Mind Biospecimen Bank Listing
is listed by: Resource Information Network
is related to: Federation of International Mouse Resources
is related to: MGI strains
has parent organization: RIKEN Tsukuba Institute; Kansai; Japan
is parent organization of: JCM
works with: Cellosaurus
works with: International Mouse Strain Resource
PMID:19448331
PMID:34532769
Free, Freely available nif-0000-31407 SCR_003250 RIKEN Tsukuba Institute RIKEN BioResource Center 2026-08-03 09:32:02 2208
PLANTTFDB
 
Resource Report
Resource Website
1000+ mentions
PLANTTFDB (RRID:SCR_003362) PlantTFDB production service resource, data analysis service, service resource, database, analysis service resource, data or information resource Comprehensive plant transcription factor database. Interface to allow users to search the database by IDs or free texts, to make sequence similarity search against TFs of all or individual species, and to download TF sequences for local analysis.PlantTFDB 3.0: a portal for the functional and evolutionary study of plant transcription factors transcription factor, expression, regulation, interaction, conserved element, phenotype, function, evolution, bio.tools, FASEB list is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
is related to: Gene Ontology
is related to: Database of Poplar Transcription Factors
is related to: Plant Ontology
has parent organization: Peking University; Beijing; China
China 863 ;
China 973 ;
NSFC ;
China NSFC
PMID:24174544
PMID:17933783
PMID:21097470
Free, Available for download, Freely available nif-0000-03311, biotools:planttfdb_2.0, OMICS_00560, r3d100010137 https://bio.tools/planttfdb_2.0, https://doi.org/10.17616/R3JG6V http://planttfdb.cbi.pku.edu.cn SCR_003362 , PlantTFDB 2.0, Plant Transcription Factor Database 2026-08-03 09:32:14 1109
mGOASVM
 
Resource Report
Resource Website
1+ mentions
mGOASVM (RRID:SCR_013098) mGOASVM production service resource, data analysis service, web service, analysis service resource, data access protocol, service resource, software resource Data analysis service for the prediction of multi-label protein subcellular localization based on gene ontology and support vector machines. Web services are also available. subcellular localization, gram-negative protein, virus, protein is listed by: OMICtools
has parent organization: Hong Kong Polytechnic University; Hong Kong; China
PMID:23130999 OMICS_01627 SCR_013098 2026-08-03 09:35:08 4
Crop Ontology
 
Resource Report
Resource Website
1+ mentions
Crop Ontology (RRID:SCR_010299) CO controlled vocabulary, data or information resource, ontology Ontology that includes crop-specific trait ontologies for several economically important plants like rice, wheat, maize, potato, musa, chickpea and sorghum along with other important domains for crop research such as germplasm, passport, trait measurement scales, experimental design factors etc. obo is listed by: BioPortal nlx_157378 http://cropontology.org/ SCR_010299 2026-08-03 09:34:48 8
Plant Anatomy
 
Resource Report
Resource Website
Plant Anatomy (RRID:SCR_010408) PAE controlled vocabulary, data or information resource, ontology THIS RESOURCES IS NO LONGER IN SERVICE, documented on April 23, 2014. REPLACED BY: Plant Ontology (PO). A controlled vocabulary of plant morphological and anatomical structures representing organs, tissues, cell types, and their biological relationships based on spatial and developmental organization. Note that this has been subsumed into the PO. This file is created by filtering plant_ontology_assert.obo to contain only terms from the plant anatomical entity branch of the PO. For more information, please see: http://palea.cgrb.oregonstate.edu/viewsvn/Poc/tags/live/ obo is listed by: BioPortal
has parent organization: Plant Ontology
THIS RESOURCE IS NO LONGER IN SERVICE nlx_157553 SCR_010408 2026-08-03 09:34:40 0
PMTED
 
Resource Report
Resource Website
1+ mentions
PMTED (RRID:SCR_010854) PMTED production service resource, data analysis service, service resource, database, analysis service resource, data or information resource A Plant MicroRNA Target Expression Database to study the microRNA (miRNA) functions by inferring their target gene expression profiles among the large amount of existing microarray data. You may also predict your miRNA targets and retrieve their microarray expression data. gene expression, target, bioprocess, microrna, condition is listed by: OMICtools National High-tech Development Plan 863 Program OMICS_00413 SCR_010854 Plant MicroRNA Target Expression Database 2026-08-03 09:34:35 6
PlnTFDB
 
Resource Report
Resource Website
100+ mentions
PlnTFDB (RRID:SCR_010899) production service resource, data analysis service, service resource, database, analysis service resource, data or information resource Public database arising from efforts to identify and catalogue all plant genes involved in transcriptional control.Integrative plant transcription factor database that provides web interface to access large sets of transcription factors of several plant species, currently encompassing Arabidopsis thaliana (thale cress), Populus trichocarpa (poplar), Oryza sativa (rice), Chlamydomonas reinhardtii and Ostreococcus tauri. Provides access point to its daughter databases of species-centered representation of transcription factors (OstreoTFDB, ChlamyTFDB, ArabTFDB, PoplarTFDB and RiceTFDB). Information including protein sequences, coding regions, genomic sequences, expressed sequence tags, domain architecture and scientific literature is provided for each family. protein model, protein sequence, gene family, protein, transcriptional control, blast, bio.tools, FASEB list is listed by: OMICtools
is listed by: Debian
is listed by: bio.tools
University of Potsdam ;
Germany ;
German Federal Ministry of Education and Research ;
Fond der Chemischen Industrie
PMID:19858103
PMID:17286856
Free, Freely available biotools:plntfdb, OMICS_00561 http://plntfdb.bio.uni-potsdam.de/v3.0/, https://bio.tools/plntfdb SCR_010899 Plant Transcription Factor Database, PlnTFDB v3.0 2026-08-03 09:34:54 201
Genevestigator
 
Resource Report
Resource Website
100+ mentions
Genevestigator (RRID:SCR_002358) Genevestigator production service resource, data analysis service, data or information resource, database, analysis service resource, service resource, commercial organization A high performance search engine for gene expression that integrates thousands of manually curated public microarray and RNAseq experiments and nicely visualizes gene expression across different biological contexts (diseases, drugs, tissues, cancers, genotypes, etc.). There are two basic analysis approaches: # for a gene of interest, identify which conditions affect its expression. # for condition(s) of interest, identify which genes are specifically expressed in this/these conditions. Genevestigator builds on the deep integration of data, both at the level of data normalization and on the level of sample annotations. This deep integration allows scientists to ask new types of questions that cannot be addressed using conventional tools. gene, genetic, animal, development, disease, meta-analysis, regulation, stage, microarray, rnaseq, visualization, gene expression, disease, drug, tissue, cancer, genotype, pharma, biomedical, conditions, genotype, anatomy, neoplasm, chemical, hormone, infection, model organism, organ, cell type, cell line, target, biomarker, similarity, FASEB list is parent organization of: RefGenes 4 products:, Free, Free for academic use, Account required, Paid subscription, Local installation nif-0000-21172, OMICS_00763 SCR_002358 2026-08-03 09:31:47 396
GRBio
 
Resource Report
Resource Website
10+ mentions
GRBio (RRID:SCR_002228) GRBio web service, people resource, database, data access protocol, data or information resource, software resource Database of biological collections in natural history museums, herbaria, and other biorepositories resulting from a merger of Index Herbariorum (IH), Biodiversity Collections Index (BCI) and biorepositories.org. It contains more than 14,000 records for biorepository institutions, their collections, and staff members. Their two main goals are to improve access to information about biorepositories, the collections and specimens they house, and the researchers and collection managers who work there; and to facilitate electronic linkages to this information through web services that will rely on unique identifiers assigned to biorepositories and collections. The Consortium for the Barcode of Life (CBOL) has developed and will manage GRBio in collaboration with IH and BCI and in consultation with GBIF and NCBI. GRBio includes four categories of data records that provide information on: * Institutional repositories such as museums, herbaria, botanical gardens, zoos, biomedical research institutes and culture centers; * Institutional collection records such as the bird, algal or insect collections within an institutional repository; * Personal collections such as field samples held by a researcher before they have been accessioned into an institutional collection, or privately owned specimens held by non-researchers; and * Staff members at institutional repositories GRBio operates as a moderated community-curated resource. The community is invited to check and update their records and to register institutions, collections and staff members that have not already been registered. GRBio offers registration of institutional collections, "personal" research collections that have not yet been accessioned into an institutional repository, and privately owned collections. biospecimen repository, biodiversity, biorepository, specimen, institution, registry, biological collection, natural history museum, herbaria, darwin core identifier, taxonomy lists: Culture Collection of Algae at the University of Cologne
lists: Universidade Federal do Ceara, Centro Ciencias Agrarias
lists: Central College of Bangalore
lists: Culture Collection of Fungi
lists: Carter County Museum
is related to: Culture Collection of Algae at the University of Cologne
is related to: Universidade Federal do Ceara, Centro Ciencias Agrarias
is related to: Culture Collection of Fungi
is related to: Carter County Museum
Public, The community can contribute to this resource nlx_155523 SCR_002228 Global Registry of Biorepositories 2026-08-03 09:31:43 11
Gramene
 
Resource Report
Resource Website
500+ mentions
Gramene (RRID:SCR_002829) GR data or information resource, database Curated, open-source, integrated data resource for comparative functional genomics in crops and model plant species to facilitate the study of cross-species comparisons using information generated from projects supported by public funds. It currently hosts annotated whole genomes in over two dozen plant species and partial assemblies for almost a dozen wild rice species in the Ensembl browser, genetic and physical maps with genes, ESTs and QTLs locations, genetic diversity data sets, structure-function analysis of proteins, plant pathways databases (BioCyc and Plant Reactome platforms), and descriptions of phenotypic traits and mutations. The web-based displays for phenotypes include the Genes and Quantitative Trait Loci (QTL) modules. Sequence based relationships are displayed in the Genomes module using the genome browser adapted from Ensembl, in the Maps module using the comparative map viewer (CMap) from GMOD, and in the Proteins module displays. BLAST is used to search for similar sequences. Literature supporting all the above data is organized in the Literature database. In addition, Gramene now hosts a variety of web services including a Distributed Annotation Server (DAS), BLAST and a public MySQL database. Twice a year, Gramene releases a major build of the database and makes interim releases to correct errors or to make important updates to software and/or data. Additionally you can access Gramene through an FTP site. crop, plant genome, genetic, blast, gene, genome, genetic diversity, pathway, protein, marker, quantitative trait locus, comparative map, phenotype, genomics, physiology, comparative, grain, expressed sequence tag, trait, mutation, environment, taxonomy, web service, bio.tools, FASEB list is used by: NIF Data Federation
is listed by: re3data.org
is listed by: bio.tools
is listed by: Debian
is related to: AmiGO
is related to: Gene Ontology
is related to: Plant Ontology
is related to: Trait Ontology
is related to: EnvO
is related to: BioCyc
has parent organization: Cold Spring Harbor Laboratory
has parent organization: Cornell University; New York; USA
is parent organization of: Trait Ontology
is parent organization of: Plant Environmental Conditions
is parent organization of: Plant Trait Ontology
is parent organization of: Cereal Plant Development Ontology
is parent organization of: Cereal Plant Gross Anatomy Ontology
USDA IFAFS 00-52100-9622;
USDA 58-1907-0-041;
USDA 1907-21000-030;
NSF 0321685;
NSF 0703908;
NSF 0851652
PMID:21076153
PMID:17984077
PMID:16381966
Free, Freely available r3d100010856, nif-0000-02926, nlx_65829, biotools:gramene https://bio.tools/gramene, https://doi.org/10.17616/R3GG7M SCR_002829 GR PROTEIN, RiceGenes, GR REF, GR GENE, Gramene: A Resource for Comparative Grass Genomics, GR QTL 2026-08-03 09:31:51 778
PlantLoc
 
Resource Report
Resource Website
1+ mentions
PlantLoc (RRID:SCR_003138) PlantLoc production service resource, data analysis service, analysis service resource, service resource, software resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on January 4,2023. An accurate web server for predicting plant protein subcellular localization by substantiality motif. subcellular localization, protein is listed by: OMICtools
has parent organization: Tongji University; Shanghai; China
PMID:23729470 THIS RESOURCE IS NO LONGER IN SERVICE OMICS_01632 SCR_003138 PlantLoc: Plant Proteins Subcellular Localization Prediction Server 2026-08-03 09:32:12 4
JASPAR
 
Resource Report
Resource Website
1000+ mentions
JASPAR (RRID:SCR_003030) JASPAR production service resource, data analysis service, service resource, database, analysis service resource, data or information resource Open source database of curated, non-redundant set of profiles derived from published collections of experimentally defined transcription factor binding sites for multicellular eukaryotes. Consists of open data access, non-redundancy and quality. JASPAR CORE is smaller set that is non-redundant and curated. Collection of transcription factor DNA-binding preferences, modeled as matrices. These can be converted into Position Weight Matrices (PWMs or PSSMs), used for scanning genomic sequences. Web interface for browsing, searching and subset selection, online sequence analysis utility and suite of programming tools for genome-wide and comparative genomic analysis of regulatory regions. New functions include clustering of matrix models by similarity, generation of random matrices by sampling from selected sets of existing models and a language-independent Web Service applications programming interface for matrix retrieval. structural class, transcription factor binding site, profile, regulatory region, genome, genomic, matrix, transcription factor, binding site, dna, FASEB list is listed by: OMICtools
is listed by: re3data.org
is related to: Babelomics
has parent organization: University of Copenhagen; Copenhagen; Denmark
has parent organization: Karolinska Institute; Stockholm; Sweden
Novo Nordisk Foundation ;
European Union ;
EMBRACEa Sixth Framework Network of Excellence ;
Sars Centre ;
Carlsberg Foundation
PMID:18006571
PMID:16381983
PMID:14681366
Free, Freely available r3d100010091, OMICS_00538, nif-0000-03061 https://doi.org/10.17616/R3QC7R http://129.177.120.189/cgi-bin/jaspar2010/jaspar_db.pl, http://jaspar.cgb.ki.se SCR_003030 JASPAR, JASPAR CORE, JASPAR CORE database, JASPAR database 2026-08-03 09:32:08 4766
BOLD
 
Resource Report
Resource Website
100+ mentions
BOLD (RRID:SCR_004278) BOLD data repository, production service resource, data analysis service, data or information resource, database, storage service resource, analysis service resource, service resource DNA barcode data with an online workbench that supports data validation, annotation, and publication for specimen, distributional, and molecular data. The data platform consists of three main modules, a data portal, a database of barcode clusters, and data collection workbench. The Public Data Portal provides access to all public barcode data which consists of data generated using the Workbench module as well as data mined from other sources. The Barcode Index Number (BIN) system assigns a unique identifier to each sequence cluster of COI, providing an interim taxonomic system for species in the animal kingdom. The workbench module integrates secure databases with analytical tools to provide a private collaborative environment for researchers to collect, analyze, and publish barcode data and ancillary DNA sequences. This platform also provides an annotation framework that supports tagging and commenting on records and their components (i.e. taxonomy, images, and sequences), allowing for community-based validation of barcode data. By providing specialized services, it aids in the assembly of records that meet the standards needed to gain BARCODE designation in the global sequence databases. Because of its web-based delivery and flexible data security model, it is also well positioned to support projects that involve broad research alliances. Public data records include record identifiers, taxonomy, specimen details, collection information and sequence data. Data that has been publicly released through BOLD can be retrieved manually through the BOLD public interface or automatically through BOLD web services. BOLD analytical tools are available for any data set that exists in BOLD (including publicly available data). Analytical tools can be accessed through the BOLD Project Console under the headings Sequences Analysis or Specimen Aggregates. Some examples include Taxon ID Tree, Alignment Viewer, Distribution Maps, and Image Library. protists, taxonomy, dna, barcode, dna barcode, gene sequence, primer, publication, barcode index number, unique identifier, annotation, platform, data management, data sharing, dna sequence, bioinformatics, molecular biology, biology, geography, species, sequence cluster, map, web service, image collection, FASEB list is listed by: re3data.org
is listed by: DataCite
is listed by: FAIRsharing
has parent organization: University of Guelph; Ontario; Canada
Canada Foundation for Innovation ;
Genome Canada ;
Ontario Innovation Trust ;
NSERC ;
Gordon and Betty Moore Foundation
PMID:18784790 Free, Public DOI:10.17616/R3PP7J, nlx_29236, DOI:10.25504/FAIRsharing.en9npn, DOI:10.5883, r3d100010129 http://www.boldsystems.org/, https://doi.org/10.17616/R3PP7J, https://doi.org/10.17616/r3pp7j, https://doi.org/10.5883/, https://dx.doi.org/10.5883/, https://fairsharing.org/10.25504/FAIRsharing.en9npn, https://doi.org/10.17616/R3KG65 SCR_004278 BOLD Systems, Barcode of Life Database Systems, Barcode of Life Database, Barcode of Life Data Systems, BOLD : The Barcode of Life Data System 2026-08-03 09:32:27 298
Cell Type Ontology
 
Resource Report
Resource Website
1+ mentions
Cell Type Ontology (RRID:SCR_004251) CL controlled vocabulary, data or information resource, ontology Ontology designed as a structured controlled vocabulary for cell types. It was constructed for use by the model organism and other bioinformatics databases. It includes cell types from prokaryotes, mammals, and fungi. The ontology is available in the formats adopted by the Open Biological Ontologies umbrella and is designed to be used in the context of model organism genome and other biological databases. cell ontology, ontology repository is listed by: BioPortal
is listed by: Ontology Lookup Service
is related to: CELDA Ontology
is related to: OBO
is related to: Cell Line Knowledge Base
BBSRC ;
MRC ;
NIH ;
NSF DBI-9978564;
NSF PGRP-0321666
PMID:15693950 Free, Freely available nlx_26501 http://purl.bioontology.org/ontology/CL http://cellontology.org, http://www.obofoundry.org/cgi-bin/detail.cgi?id=cell, SCR_004251 cellontology.org, Obo-cell-type, Cell Ontology 2026-08-03 09:32:23 6
Plantagora
 
Resource Report
Resource Website
1+ mentions
Plantagora (RRID:SCR_001227) Plantagora data or information resource, software resource, data set THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 18,2025. A web-based plant genome assembly simulation platform whose resources include out of the box scripts for analyzing assembly data, an on-demand web graphing tool to model your experiment, and a downloadable database with metrics and parameters from over 3,000 simulated genome assemblies. next-generation sequencing, genome assembly, sequencing, genome, 454, illumina, simulate is listed by: OMICtools
has parent organization: University of Arizona; Arizona; USA
PMID:22174807 THIS RESOURCE IS NO LONGER IN SERVICE OMICS_02116 SCR_001227 Plantagora - a resource for plant genome assembly 2026-08-03 09:31:19 1
EOL - Encyclopedia of Life
 
Resource Report
Resource Website
100+ mentions
EOL - Encyclopedia of Life (RRID:SCR_005905) EOL data or information resource, database, portal Database that gathers, generates, and shares taxa, images, videos, and sounds to freely provide knowledge about life on earth to increase awareness and understanding of living nature. Free EOL memberships are ranked so members have greater authority and editorial abilities based on their level of expertise. life, encyclopedia, environmental sciences, ecology, ecological survey, life sciences, specie, species diversity, diversity, taxon, image, video, audio, FASEB list is listed by: re3data.org
is related to: Pensoft
is related to: Biodiversity Heritage Library
John D. and Catherine T. MacArthur Foundation ;
Alfred P. Sloan Foundation
PMID:24891832 Creative Commons License, Acknowledgement requested, Note that a single page may be made up of many different data elements, Each covered by a different license, Http://eol.org/info/copyright_and_linking#using_content r3d100010229, nlx_149476 https://doi.org/10.17616/R35S3D SCR_005905 Encyclopedia of Life 2026-08-03 09:32:49 138
RESNET
 
Resource Report
Resource Website
1000+ mentions
RESNET (RRID:SCR_002121) ResNet data or information resource, database Databases that represent sets of pre-compiled information on biological relationships and associations, interactions and facts which have been extracted from the biomedical literature using Ariadne's MedScan technology. ResNet databases store information harvested from the entire PubMed in a formal structure that allows searching, retrieval and updating by Pathway Studio user. ResNet is seamlessly installed when Pathway Studio is installed. There are several available ResNet databases: *ResNet Mammalian Database includes data for Human, Rat, and Mouse *ResNet Plant Database has data on Arabidopsis, Rice and several other plants. Features of ResNet: *All extracted relations have linked access to the original article or abstract *Synonyms and homologs are included to maintain gene identity and to obviate redundancy in search results *Users can update ResNet as often as required using the MedScan technology built into all Ariadne products *Updates are made available by Ariadne every quarter To purchase Pathway Studio software with ResNet database, for information, or to schedule a web demonstration, call our sales department at (240) 453-6272, or (866) 340-5040 (toll free)., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. biological relationship, biomedical, literature, interaction, FASEB list is listed by: Biositemaps
has parent organization: Indiana University School of Medicine; Indiana; USA
THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-20909 http://www.ariadnegenomics.com/products/databases/ariadne-resnet/ SCR_002121 Ariadne ResNet Databases, ResNet Databases 2026-08-03 09:31:45 1384
Plant Structure Development Stage
 
Resource Report
Resource Website
1+ mentions
Plant Structure Development Stage (RRID:SCR_010410) PSDS controlled vocabulary, data or information resource, ontology A controlled vocabulary of growth and developmental stages in various plants. Note that this has been subsumed into the Plant Ontology (PO). This file is created by filtering plant_ontology_assert.obo to contain only terms from the plant structure development stage branch of the PO. For more information, please see: http://palea.cgrb.oregonstate.edu/viewsvn/Poc/tags/live/ obo is listed by: BioPortal
has parent organization: Plant Ontology
nlx_157555 http://www.plantontology.org SCR_010410 2026-08-03 09:34:49 2
ProRepeat
 
Resource Report
Resource Website
1+ mentions
ProRepeat (RRID:SCR_006113) ProRepeat data or information resource, database ProRepeat is an integrated curated repository and analysis platform for in-depth research on the biological characteristics of amino acid tandem repeats. ProRepeat collects repeats from all proteins included in the UniProt knowledgebase, together with 85 completely sequenced eukaryotic proteomes contained within the RefSeq collection. It contains non-redundant perfect tandem repeats, approximate tandem repeats and simple, low-complexity sequences, covering the majority of the amino acid tandem repeat patterns found in proteins. The ProRepeat web interface allows querying the repeat database using repeat characteristics like repeat unit and length, number of repetitions of the repeat unit and position of the repeat in the protein. Users can also search for repeats by the characteristics of repeat containing proteins, such as entry ID, protein description, sequence length, gene name and taxon. ProRepeat offers powerful analysis tools for finding biological interesting properties of repeats, such as the strong position bias of leucine repeats in the N-terminus of eukaryotic protein sequences, the differences of repeat abundance among proteomes, the functional classification of repeat containing proteins and GC content constrains of repeats' corresponding codons. amino acid, tandem, repeat, protein, sequence, nucleotide sequence, repeat fragment, protein repeat, proteome, sequence length, gene, taxon, bio.tools is listed by: Debian
is listed by: bio.tools
is related to: UniProtKB
is related to: RefSeq
has parent organization: Wageningen University and Research Centre; Gelderland; Netherlands
PMID:22102581 nlx_151587, biotools:prorepeat https://bio.tools/prorepeat SCR_006113 2026-08-03 09:32:53 1
OBO Tracker: Plant Ontology (PO) TERM requests
 
Resource Report
Resource Website
1+ mentions
OBO Tracker: Plant Ontology (PO) TERM requests (RRID:SCR_006497) OBO SF PO data or information resource, database Open Biomedical Ontologies Tracker that allows users to browse the Plant Ontology (PO) term requests and view their status. Details include a summary, ID, status, Date opened, assignee, submitter, resolution and assigned priority. New requests are accepted from logged in users. plant, ontology, term is related to: OBO
has parent organization: SourceForge
The community can contribute to this resource, Account required nlx_99576 SCR_006497 Tracker: PO TERM requests, Tracker: Plant Ontology TERM requests, SourceForge.net: Open Biomedical Ontologies: Plant Ontology (PO) TERM requests, Source Forge OBO Plant Ontology (PO) term request tracker, Tracker: Plant Ontology (PO) TERM requests 2026-08-03 09:33:05 2

Can't find your Tool?

We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.

Can't find the RRID you're searching for? X
X
  1. RRID Portal Resources

    Welcome to the RRID Resources search. From here you can search through a compilation of resources used by RRID and see how data is organized within our community.

  2. Navigation

    You are currently on the Community Resources tab looking through categories and sources that RRID has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.

  3. Logging in and Registering

    If you have an account on RRID then you can log in from here to get additional features in RRID such as Collections, Saved Searches, and managing Resources.

  4. Searching

    Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:

    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into RRID you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.