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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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Database of Spatially Interacting Motifs in Proteins Resource Report Resource Website |
Database of Spatially Interacting Motifs in Proteins (RRID:SCR_007735) | iMOTdb | data or information resource, database | Comprehensive collection of spatially interacting motifs in proteins. Interacting motif database lists interacting motifs that are identified for all structural entries in PDB. Conserved patterns or finger prints are identified for individual structural entries and also grouped together for reporting common motifs shared among all superfamily members. | Conserved patterns, spatially interacting motifs, finger prints, structural entries, protein | has parent organization: Tata Institute of Fundamental Research; Mumbai; India | Wellcome Trust | PMID:16381866 | Free, Freely available | nif-0000-03018, SCR_008194, nif-0000-21218 | SCR_007735 | 2026-08-11 09:41:35 | 0 | ||||||
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Hyper Cell Line Database Resource Report Resource Website |
Hyper Cell Line Database (RRID:SCR_007730) | HyperCLDB | biomaterial supply resource, tissue bank, material resource | Hypertext on cell culture availability extracted from the Cell Line Data Base of the Interlab Project. HyperCLDB includes links to records of OMIM, the Online Mendelian Inheritance in Man Catalogue, and now also links to the PubMed, database of bibliographic biomedical references, which are drawn primarily from MEDLINE and PREMEDLINE. | cell, cell line, tumor, tissue, organ, blood, bodily fluid, ascitic fluid, brain, bone marrow, cancer, transforming agent, software, bio.tools |
is listed by: One Mind Biospecimen Bank Listing is listed by: 3DVC is listed by: Debian is listed by: bio.tools is related to: ATCC is related to: Cell Line Knowledge Base has parent organization: IST National Institute for Cancer Research; Genoa; Italy |
Cancer, Etc. | PMID:18927105 | nif-0000-03004, biotools:hypercldb | https://bio.tools/hypercldb | SCR_007730 | 2026-08-11 09:41:38 | 0 | ||||||
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FaceBase Biorepository Resource Report Resource Website 1+ mentions |
FaceBase Biorepository (RRID:SCR_006001) | FaceBase Biorepository | biomaterial supply resource, tissue bank, material resource | THIS RESOURCE IS NO LONGER IN SERVICE,documented on January,18, 2022. FaceBase Biorepository is now collecting biological samples from people with cleft lip/palate and their family members. Information for Prospective Cases: Clefts of the lip and/or palate can be caused by a wide range of genetic, environmental and other factors. The FaceBase Biorepository will serve as a common source of both biological samples and information that can be made available to investigators trying to determine the underlying cause of these common birth defects. Genetic studies, in particular, will benefit from both family history information and having samples from affected individuals as well as their family members. DNA is the information containing molecules found in all the cells of our body and can be easily obtained from material such as blood or saliva samples. As part of the FaceBase Biorepository, we are requesting families to submit biological samples from specific family members as well as information from other family members that might be affected with either the same condition or a similar condition. The medical and family history information that is collected includes other relevant information such as exposure to possible environmental causes during pregnancy. The biorepository is managed by Nichole Nidey, a research study coordinator, and Jeff Murray, a pediatric clinical geneticist and researcher. They are available to speak with family members regarding questions they may have, including providing information about the biorepository and making arrangements for the collection of samples for those who wish to participate. All participation is voluntary. Your name or other personally identifiable information (name, address, etc) will be removed before information is placed in the biorepository. Summary data to show how the database itself has been used overall as well as updates on whether specific findings might have been made using this database will be available on the FaceBase website at www.facebase.org. A newsletter containing this information will also be given to families and referring clinicians so that they may discuss the specifics with the families if there appears to be information that might be relevant in a particular case. Families will also need to sign a consent form that has been approved by the Institutional Review Board at the University of Iowa. Also, any submitted samples or data can also be removed from the database at any time should the family no longer wish to participate. Investigators interested in requesting DNA samples or for more information, please contact cleftresearch (at) uiowa.edu, Nichole Nidey, nichole-nidey (at) uiowa.edu or (319) 353-4365, or Jeff Murray, jeff-murray (at) uiowa.edu. | birth defect, genetic, environment, gene |
is listed by: One Mind Biospecimen Bank Listing has parent organization: FaceBase |
Cleft lip, Cleft palate, Family member, Campomelic Dysplasia, Chromosome Abnormality, Congenital Heart Disease, Facial clefting-Tessier Type 4, Gordon Syndrome, Hemifacial Microsomia, Idiopathic Short Stature, Marshall/Stickler, Microtia, Multiple Congenital Anomaly, Neurofibromatosis, Pierre Robin, Popliteal Pterygium Syndrome, Robinow, Downs syndrome, Townes-Brock Syndrome, Van der Woude Syndrome, Popliteal Pterygium Syndrome, Wildervanck Syndrome | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_151379 | SCR_006001 | 2026-08-11 09:41:20 | 1 | |||||||
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NIA Nonhuman Primate Tissue Bank Resource Report Resource Website |
NIA Nonhuman Primate Tissue Bank (RRID:SCR_007324) | NHP Tissue Bank | biomaterial supply resource, tissue bank, material resource | A repository of tissue collected from nonhuman primate (NHP) species under contractual arrangement with Wisconsin National Primate Research Center (WI NPRC). NIA''''s Nonhuman Primate Tissue Bank collects and archives tissue from necropsies performed at primate centers nationwide. The goal is to collect various tissues from aged monkeys with smaller amounts of the same tissues from young and middle-aged monkeys. Tissue will be provided as: (1) fresh frozen, stored at ����?��������??80 degrees Celsius; (2) formalin fixed; or (3) fresh frozen tissue in OCT medium.Most frozen tissues are provided in approximately 1 gram of tissue per vial. Fixed tissue is available as slides (sections) from paraffin-embedded blocks. Slides can be stained if requested. Tissue from NIA''''s Nonhuman Primate Tissue Bank is available to investigators at academic and nonprofit research institutions who are engaged in funded research on aging. The project name and funding source must accompany all orders. The NIA will not be able to ship non-human primate tissue outside of the United States or US territories. Investigators at for-profit entities are not eligible to purchase tissue from NIA''''s Nonhuman Primate Tissue Bank unless it is for a Small Business Innovation Research grant from NIA. NIA provides the health information as given by the donor site and cannot guarantee other aspects of the health status not explicitly stated in the Vital Statistics Information Sheet. Concerns about the specific health status of donor animals should be indicated on the order form. | tissue, fresh frozen, fixed block, slide, oct, frozen, fixed, paraffin-embedded block, stained, middle adult, aged, late adult, young, non-human primate, rhesus monkey |
is listed by: One Mind Biospecimen Bank Listing is related to: Wisconsin National Primate Research Center has parent organization: NIA Scientific Resources |
Aged, Middle adult, Late adult, Young, Aging | NIA ; NIH Blueprint for Neuroscience Research |
Public (US): available to investigators at academic and nonprofit research institutions engaged in funded research on aging. Investigators at for-profit entities are not eligible unless it is for a Small Business Innovation Research grant from NIA. | nif-0000-00194 | http://www.nia.nih.gov/ResearchInformation/ScientificResources/NHPTissueBankHandbook.htm | SCR_007324 | Non-human Primate Tissue Bank, Nonhuman Primate Tissue Bank Handbook, Aged Nonhuman Primate Tissue Bank, Nonhuman Primate Tissue Bank, NIA Non-Human Primate Tissue Banks, NIA Non-human Primate Tissue Bank | 2026-08-11 09:41:31 | 0 | ||||
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Cooperative Human Tissue Network Western Division at Vanderbilt University Medical Center Resource Report Resource Website |
Cooperative Human Tissue Network Western Division at Vanderbilt University Medical Center (RRID:SCR_006661) | CHTN Western Division | biomaterial supply resource, tissue bank, material resource | The Cooperative Human Tissue Network- Western Division at Vanderbilt University Medical Center is one of six institutions throughout the country funded by the National Cancer Institutes to procure and distribute remnant human tissues to biomedical researchers throughout the United States and Canada. CHTN operates through a shared networking system which allows investigators greater access to available research specimens. CHTN offers a variety of preparation and preservation techniques to ensure investigators are receiving the quality specimens needed for research. Remnant tissues are obtained from surgical resections and autopsies and are procured to the specifications of the investigator. | tissue |
lists: Biospecimens/Biorepositories: Rare Disease-HUB (RD-HUB) is listed by: One Mind Biospecimen Bank Listing is related to: Vanderbilt University Medical Center; Tennessee; USA has parent organization: Vanderbilt University; Tennessee; USA |
All | NCI | Public | nlx_143710 | SCR_006661 | CHTN Western Division at VUMC, Cooperative Human Tissue Network - Western Division, VUMC Tissue Repository | 2026-08-11 09:41:26 | 0 | |||||
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Rickettsia Genome Database Resource Report Resource Website 1+ mentions |
Rickettsia Genome Database (RRID:SCR_007102) | data or information resource, database, image | THIS RESOURCE IS NO LONGER IN SERVICE, documented August 18, 2016. Rickettsia are obligate intracellular bacteria living in arthropods. They occasionally cause diseases in humans. To understand their pathogenicity, physiologies and evolutionary mechanisms, RicBase is sequencing different species of Rickettsia. Up to now we have determined the genome sequences of R. conorii, R. felis, R. bellii, R. africae, and R. massiliae. The RicBase aims to organize the genomic data to assist followup studies of Rickettsia. This website contains information on R. conorii and R. prowazekii. A R. conorii and R. prowazekii comparative genome map is also available. Images of genome maps, dendrogram, and sequence alignment allow users to gain a visualization of the diagrams. | evolutionary, africae, alignment, arthropod, bacteria, bellii, conorii, dendrogram, disease, genome, genomic, human, intracellular, massiliae, mechanism, pathogenicity, physiology, prowazekii, rickettsia, sequence, specie, journal article, topical portal | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-20993 | SCR_007102 | RicBase | 2026-08-11 09:41:28 | 1 | |||||||||
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Subcellular Location Image Finder Resource Report Resource Website 1+ mentions |
Subcellular Location Image Finder (RRID:SCR_006723) | SLIF | data or information resource, database, image | SLIF finds fluorescence microscope images in on-line journal articles, and indexes them according to cell line, proteins visualized, and resolution. Images can be accessed via the SLIF Web database. SLIF takes on-line papers and scans them for figures that contain fluorescence microscope images (FMIs). Figures typically contain multiple FMIs, to SLIF must segment these images into individual FMIs. When the FMI images are extracted, annotations for the images (for instance, names of proteins and cell-lines) are also extracted from the accompanying caption text. Protein annotation are also used to link to external databases, such as the Gene Ontology DB. The more detailed process includes: segmentation of images into panels; panel classification, to find FMIs; segmentation of the caption, to find which portions of the caption apply to which panels; text-based entity extraction; matching of extracted entities to database entries; extraction of panel labels from text and figures; and alignment of the text segments to the panels. Extracted FMIs are processed to find subcellular location features (SLFs), and the resulting analyzed, annotated figures are stored in a database, which is accessible via SQL queries. | fluorescence, annotation, cell, journal, microscope, protein, subcellular, image, cell line, fluorescence microscope, information retrieval, data mining |
is listed by: Biositemaps has parent organization: Carnegie Mellon University; Pennsylvania; USA |
Commonwealth of Pennsylvania Tobacco Settlement Fund ; National Center for Integrative Biomedical Informatics ; NIGMS R01 GM078622; NIDA U54 DA021519 |
PMID:17990497 | nif-0000-10308 | SCR_006723 | SLIF - Subcellular Location Image Finder | 2026-08-11 09:41:23 | 1 | ||||||
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Musculoskeletal Transplant Foundation - MTF Resource Report Resource Website 1+ mentions |
Musculoskeletal Transplant Foundation - MTF (RRID:SCR_006684) | MTF | biomaterial supply resource, tissue bank, material resource | The Musculoskeletal Transplant Foundation is a non-profit service organization dedicated to providing quality allograft tissue through a commitment to excellence in education, research, recovery and care for recipients, donors and their families. We are a national consortium comprised of academic medical institutions, organ procurement organizations and tissue recovery organizations. MTF was created as a charitable organization with a mission that is dedicated to the needs of donors, donor families, patients and surgeons. We focus on respectful stewardship of the donated gift while advancing the science and practice of bone, ligament, cartilage and skin transplantation. Since our inception in 1987, MTF has recovered more than 60,000 donors and distributed more than 3 million grafts for transplantation. We also support research to expand the science of transplantation, and we encourage the efforts of our members and non-member clients to improve the understanding of donation and transplantation among the medical community and the public at large. Our policies are developed and implemented by MTF''''s Medical Board of Trustees, Donation Board of Trustees and Board of Directors, composed of physicians and recovery agency representatives who are dedicated to the mission of the Foundation. This fundamental commitment enables us to set and maintain the highest levels of safety assurance and quality control in all phases of our operations. |
is listed by: One Mind Biospecimen Bank Listing is parent organization of: International Institute for the Advancement of Medicine |
nlx_89982 | SCR_006684 | Musculoskeletal Transplant Foundation | 2026-08-11 09:41:23 | 1 | |||||||||
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KI Biobank - Tissue Biobank Resource Report Resource Website 1+ mentions |
KI Biobank - Tissue Biobank (RRID:SCR_006043) | KI Biobank - Tissue Biobank | biomaterial supply resource, tissue bank, material resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented on April 4, 2014. Tissue Biobank collects samples from different types of cancers patients prospectively. Blood samples are being sent to KI Biobank for DNA extraction and storage. Number of sample donors: 611 (June 2010) | blood, dna |
is listed by: One Mind Biospecimen Bank Listing has parent organization: Karolisnka Biobank |
Cancer | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_151440 | SCR_006043 | 2026-08-11 09:41:15 | 1 | |||||||
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British Columbia Breast Cancer Tumour Bank Resource Report Resource Website |
British Columbia Breast Cancer Tumour Bank (RRID:SCR_006671) | BREAST-TTR | biomaterial supply resource, tissue bank, material resource | The Molecular Oncology department hosts the breast cancer tumour tissue repository (BREAST-TTR), a project within the agency-wide tumour tissue repository. The BREAST-TTR comprises several important banks of breast tissues, contemporaneous as well as archival. The main banks are: * 3000 frozen breast cancers, linked to 15 year outcomes data from the BCCA Breast Cancer Outcomes Unit. This archival bank consists of frozen tissue, DNA and RNA, and a tissue microarray of the cases. * Live-cryopreserved cancers. At present around 50 individual cases of metastatic breast cancer, with tumour material cryopreserved for subsequent cell culture/xenograft work. * Comptemporary bank. Between the TTR in Victoria and the accrual site in Vancouver, approximately 1300 contemporaneous (within last 4 years) breast cancers with matched normal DNA and outcomes linkages. | breast cancer, tumor, tissue, breast tissue, frozen tissue, dna, rna, tissue microarray, live-cryopreserved cancer, metastatic breast cancer, cryopreserved, matched normal dna |
is listed by: One Mind Biospecimen Bank Listing has parent organization: BC Cancer Agency |
Breast cancer, Tumor, Metastatic breast cancer, Matched normal | nlx_50799 | http://molonc.bccrc.ca/?page_id=421 | SCR_006671 | British Columbia Breast Tumour Bank, Breast Cancer Tumour Tissue Repository, British Columbia Breast Cancer Tumour Tissue Repository, British Columbia Breast Cancer Tumor Tissue Repository | 2026-08-11 09:41:26 | 0 | ||||||
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Biobank Ireland Trust Resource Report Resource Website |
Biobank Ireland Trust (RRID:SCR_006430) | Biobank Ireland | biomaterial supply resource, tissue bank, material resource | Biobank Ireland Trust promotes the development of an Irish Hospital Biobank Network to coordinate collection of small samples of cancer and normal tissue and coded patient data from those having a cancer operation. This will facilitate international molecular research collaborations, which may help identify the best treatment for each individual patient - personalized medicine. Biobank Ireland is promoting the development of a Hospital Biobank Network throughout the island of Ireland as a bridge between cancer research and care. This new infrastructure will facilitate large national and international translational research collaborations that will raise Ireland''s research profile and benefit those with cancer. Researchers will have online access to samples and to restricted patient data from participating hospitals and an equitable withdrawal process for scientifically and ethically approved projects. Important research results will be explained to the public. Other Objectives: * To facilitate (inter)national translational research collaborations that may lead to new tests and better, less toxic treatments for those with cancer * To enable molecular research on cancer tissue from clinical trials patients identify the best treatment for each individual patient ������??personalized medicine������?? * Researchers will have online access to samples and restricted patient data from participating hospitals, and a fair release process for scientifically and ethically approved projects * Biobank Ireland recognizes the need to have harmonization in biobanking around the world * Important research results will be explained to the public * Biobank Ireland will seek to have the hospital-based Biobank Network funded by government as standard of care | tissue, cancer tissue, normal tissue, blood, clinical data, tumor, frozen, cancer, normal | is listed by: One Mind Biospecimen Bank Listing | Cancer, Normal | industry ; business ; philanthropists ; fundraising events |
Collaborators: This new infrastructure will facilitate large national and international translational research collaborations that will raise Ireland''s research profile and benefit those with cancer. Researchers will have online access to samples and to restricted patient data from participating hospitals and an equitable withdrawal process for scientifically and ethically approved projects. | nlx_69463 | http://www.biobankireland.com/index.html | SCR_006430 | 2026-08-11 09:41:24 | 0 | |||||
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Open Access and the developing world Resource Report Resource Website |
Open Access and the developing world (RRID:SCR_006672) | OA in the developing world | service resource, access service resource, journal article | Free, immediate and permanent online access to the full text of all articles published within its portfolio of over 200 peer-reviewed journals, and through its open access waiver fund, ensuring that scientific authors in low-income countries do not face financial barriers to publishing in open access journals. Open access provides a way for researchers from low-income countries to participate more fully in the international research community, and so BioMed Central has created a set of initiatives designed to increase the visibility and output of scientific research from these countries. | journal article, full text, low-income country, service resource | Free (open access waiver fund) | nif-0000-07747 | http://www.biomedcentral.com/developingcountries/resources/ | SCR_006672 | 2026-08-11 09:41:24 | 0 | ||||||||
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Rare Breeds Gene Bank Resource Report Resource Website |
Rare Breeds Gene Bank (RRID:SCR_010728) | biomaterial supply resource, tissue bank, material resource | Not yet vetted by NIF curator | nlx_92805 | SCR_010728 | 2026-08-11 09:42:07 | 0 | ||||||||||||
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Danubian Biobank Consortium Resource Report Resource Website 1+ mentions |
Danubian Biobank Consortium (RRID:SCR_010566) | biomaterial supply resource, tissue bank, material resource | Not yet vetted by NIF curator | nlx_39960 | SCR_010566 | 2026-08-11 09:42:11 | 1 | ||||||||||||
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Wesley Research Institute Tissue Bank Resource Report Resource Website |
Wesley Research Institute Tissue Bank (RRID:SCR_010567) | biomaterial supply resource, tissue bank, material resource | Not yet vetted by NIF curator | nlx_40371 | SCR_010567 | 2026-08-11 09:42:05 | 0 | ||||||||||||
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RTI Biologics Resource Report Resource Website 1+ mentions |
RTI Biologics (RRID:SCR_010721) | RTI | biomaterial supply resource, tissue bank, material resource | Provides sterile biologic implants of human bone and tissues used in spine, sports medicine, orthopedic, dental and other specialty surgeries. | is listed by: One Mind Biospecimen Bank Listing | nlx_97050 | SCR_010721 | RTI Biologics Inc, RTI Biologics Inc. | 2026-08-11 09:42:13 | 1 | |||||||||
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Alpha Genesis Resource Report Resource Website 50+ mentions |
Alpha Genesis (RRID:SCR_010568) | AGI | biomaterial supply resource, tissue bank, material resource | A company which provides nonhuman primate products and bio-research services for the global scientific community. They provide serum, plasma, whole blood, and tissue samples from primates such as the Cynomolgus macaque, the Rhesus macaque, and the African Green. Products based on others species are available upon request. | commercial, supplier, nonhuman primate, macaque, african green | Commercial | nlx_40671 | http://www.alphagenesisinc.com/bioproducts.html | SCR_010568 | Alpha Genesis Inc, Alpha Genesis Incorporated | 2026-08-11 09:42:15 | 56 | |||||||
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NCI National Products Branch Resource Report Resource Website 100+ mentions |
NCI National Products Branch (RRID:SCR_010603) | biomaterial supply resource, tissue bank, material resource | Not yet vetted by NIF curator | nlx_51144 | SCR_010603 | 2026-08-11 09:42:11 | 100 | ||||||||||||
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New England Organ Bank - NEOB Resource Report Resource Website |
New England Organ Bank - NEOB (RRID:SCR_010693) | biomaterial supply resource, tissue bank, material resource | A federally designated, non-profit organ procurement organization that coordinates organ and tissue donation in the six New England states and Bermuda. | new england, organ bank, non profit, bermuda, organ procurement, tissue bank | nlx_80598 | http://www.newenglandorganbank.org | SCR_010693 | 2026-08-11 09:42:07 | 0 | ||||||||||
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Tumour Bank of Provence Resource Report Resource Website |
Tumour Bank of Provence (RRID:SCR_010694) | biomaterial supply resource, tissue bank, material resource | Not yet vetted by NIF curator | nlx_80657 | SCR_010694 | 2026-08-11 09:42:18 | 0 |
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