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http://www.nist.gov/index.html
Founded in 1901, NIST (National Institute of Standards and Technology) is a non-regulatory federal agency within the U.S. Department of Commerce. NIST''s mission is to promote U.S. innovation and industrial competitiveness by advancing measurement science, standards, and technology in ways that enhance economic security and improve our quality of life. NIST carries out its mission through the following programs: * the NIST Laboratories, conducting world-class research, often in close collaboration with industry, that advances the nation''s technology infrastructure and helps U.S. companies continually improve products and services; * the Hollings Manufacturing Extension Partnership, a nationwide network of local centers offering technical and business assistance to smaller manufacturers to help them create and retain jobs, increase profits, and save time and money; and * the Baldrige Performance Excellence Program, which promotes performance excellence among U.S. manufacturers, service companies, educational institutions, health care providers, and nonprofit organizations; conducts outreach programs; and manages the annual Malcolm Baldrige National Quality Award which recognizes performance excellence and quality achievement; * From 2007 to 2011, NIST provided cost-shared grants through the Technology Innovation Program, and between 1990 and 2007, it managed the Advanced Technology Program. NIST measurements support the smallest of technologiesnanoscale devices so tiny that tens of thousands can fit on the end of a single human hairto the largest and most complex of human-made creations, from earthquake-resistant skyscrapers to wide-body jetliners to global communication networks. We invite you to explore our web site to learn about our current projects, to find out how you can work with us, or to make use of our products and services. From the smart electric power grid and electronic health records to atomic clocks, advanced nanomaterials, and computer chips, innumerable products and services rely in some way on technology, measurement, and standards provided by the National Institute of Standards and Technology. NIST funds industrial and academic research in a variety of ways. The Small Business Innovation Research Program funds R&D proposals from small businesses. We also offer other grants to encourage work in specific fields: precision measurement, fire research, and materials science. Grants/awards supporting research at industry, academic, and other institutions are available on a competitive basis through several different Institute offices. For general information on NIST grants programs, please contact Christopher Hunton at [email protected] and (301) 975-5718.
Proper citation: NIST - National Institute of Standards and Technology (RRID:SCR_006440) Copy
Database of digitized plant specimens. Used for finding plant name, type, specimens and their label data.The collection also includes partner contributed reference works and primary sources. Used for research and teaching in botany, ecology, and conservation studies.
Proper citation: JStor Global Plants (RRID:SCR_025018) Copy
Collection of in situ hybridization data of gene expression in the brain of adult fish. Data can be viewed and downloaded.
Proper citation: Adult Zebrafish Brain Gene Expression Database (RRID:SCR_025122) Copy
https://www.ncbi.nlm.nih.gov/sra/?term=PRJNA1087118
Collection of spatial transcriptomics data of mouse CT26 sample generated by stereo-seq technology.
Proper citation: mouse-CT26-Spatial-Transcriptomics (RRID:SCR_025235) Copy
https://compbio.uth.edu/FusionGDB2/
Functional annotation database of human fusion genes.FusionGDB 2.0 has updates of contents such as up-to-date human fusion genes, fusion gene breakage tendency score with FusionAI deep learning model based on 20 kb DNA sequence around BP, investigation of overlapping between fusion breakpoints with human genomic features across cellular role's categories, transcribed chimeric sequence and following open reading frame analysis with coding potential based on deep learning approach with Ribo-seq read features, and rigorous investigation of protein feature retention of individual fusion partner genes in protein level.
Proper citation: FusionGDB2 (RRID:SCR_025299) Copy
https://medinform.jmir.org/2015/4/e35
Algorithm for generating unique study identifiers in distributed and validatable fashion, in multicenter research. Light-weight, block chain style resource identifier generation for tracking resource linkage, provenance, utilization, and visualization. NHash has unique set of properties: (1) it is a pseudonym serving the purpose of linking research data about study participant for research purposes; (2) it can be generated automatically in completely distributed fashion with virtually no risk for identifier collision; (3) it incorporates set of cryptographic hash functions based on N-grams, with combination of additional encryption techniques such as shift cipher; (d) it is validatable (error tolerant) in the sense that inadvertent edit errors will mostly result in invalid identifiers.
Proper citation: NHash Identifier (RRID:SCR_025313) Copy
Provides catalogue of confirmed and predicted DNA replication origin sites. At present this is limited to budding yeast and fission yeast. Data have been collated as culmination of number of genome-wide studies to identify location of replication origins throughout budding yeast genome. In addition to genome-wide studies data from large number of other origin mapping and characterization studies have been included.
Proper citation: OriDB (RRID:SCR_025365) Copy
https://snp.icgrc.info/cannseek
Database of Cannabis sativa Single Nucleotide Polymorphisms discovered from NGS sequences and BioSamples available in NCBI. Sequence reads were called against cs10, Purple kush, and Finola reference assemblies using GATK and Parabricks pipelines.
Proper citation: CannSeek Database of Cannabis sativa SNPs (RRID:SCR_025579) Copy
https://polymerscreen.yale.edu
Open access web app that allows users to search for optimal condition for extraction of membrane proteins into membrane active polymers which allows for retention of native membrane environment around target protein.
Proper citation: MAP Database Guide for Membrane Protein Solubilization (RRID:SCR_025656) Copy
A raster layer of global vegetation types, in Chinese. Please note the website is not functional from the US.
Proper citation: Chinese National Earth System Science Data Center (RRID:SCR_025658) Copy
Web app for global DEM data with spatial resolution of about 30m. This data can be used for mapping and spatial modelling in GIS or other computer programs.
Proper citation: Chinese Geospatial Data Cloud (RRID:SCR_025659) Copy
Public archive of raw sequence data in National Genomics Data Center as part of the China National Center for Bioinformation. GSA accepts worldwide data submissions, performs data curation and quality control for all submitted data. Provides data storage and sharing services.
Proper citation: Chinese Genome Sequence Archive (RRID:SCR_025826) Copy
Publicly accessible 3D data repository where subject experts, educators, and general public can find, view, interact with, and download 3D and 2D media representing physical objects important to the world’s natural history, cultural heritage, and scientific collections. Media data are contributed by a community that includes museums, institutions, researchers, scholars, and other subject experts who use MorphoSource to archive data, share findings, and increase scholarly impact. Contributed media represent both biological objects such as fossils and representatives of living species, as well as artifacts and objects created by humans that are critical to our shared cultural heritage.
Proper citation: MorphoSource (RRID:SCR_025654) Copy
https://discover.nci.nih.gov/cellminer/
Database and query tool designed for cancer research community to facilitate integration and study of molecular and pharmacological data for the NCI-60 cancerous cell lines. The NCI-60, panel of 60 diverse human cancer cell lines used by the Developmental Therapeutics Program of the U.S. National Cancer Institute to screen over 100,000 chemical compounds and natural products since 1990.
Proper citation: CellMiner (RRID:SCR_025648) Copy
https://subtiwiki.uni-goettingen.de/
Comprehensive database about Gram-positive model bacterium Bacillus subtilis. Provides curated information about its genes and proteins, as well as intricate protein–protein interactions, regulatory elements, expression data and metabolic pathways.
Proper citation: SubtiWiki (RRID:SCR_025748) Copy
https://sipi.usc.edu/database/
Collection of digitized images.Maintained primarily to support research in image processing, image analysis, and machine vision.
Proper citation: USC-SIPI Image Database (RRID:SCR_025683) Copy
Openly licensed platform to work with RNA-RNA and protein-RNA interactions with software and pipelines to deeply mining thousands of high-throughput sequencing data of RNA-RNA interactome, CLIP-seq and degradome sequencing.
Proper citation: Encyclopedia of RNA Interactomes (RRID:SCR_025686) Copy
https://www.bioconductor.org/packages/devel/bioc/html/EnrichDO.html
Software R package as global weighted model for disease ontology enrichment analysis. Used for annotating and enrichment analysis with disease ontology.
Proper citation: EnrichDO (RRID:SCR_025840) Copy
Collection of literature and in-house MSn spectra data for research on plant metabolomics.
Proper citation: ReSpect for Phytochemicals (RRID:SCR_025688) Copy
Database with products that can serve as alternative for basement membrane extracts (BMEs) for in vitro applications. BME-free database is publicly available and is part of 3Rs Research Tools Programme, which is managed and hosted by 3Rs Centre Utrecht.
Proper citation: Basement Membrane Extract (BME)-free Database (RRID:SCR_026058) Copy
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