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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Illumina: NovaSeq 6000 Sequencing System Resource Report Resource Website 100+ mentions |
Illumina: NovaSeq 6000 Sequencing System (RRID:SCR_016387) | instrument resource | High-throughput platform used for next-generation sequencing (NGS) applications, including whole-genome, whole-exome, and whole-transcriptome sequencing. It is designed to provide a scalable, high-volume, and reliable way to sequence DNA and RNA for a wide range of genomic studies, from research to clinical applications. | Instrument, equipment, sequencer, sequencing, dna, rna, platform, novaseq, sequencing system, USEDit | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_016387.pdf | SCR_020150, Model_Number_NovaSeq_6000 | https://www.illumina.com/systems/sequencing-platforms/novaseq/specifications.html | SCR_016387 | Illumina NovaSeq 6000 Sequencing, Illumina NovaSeq 6000 | 2026-08-01 12:05:38 | 277 | ||||||||
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Illumina: NextSeq 550 System Resource Report Resource Website 10+ mentions |
Illumina: NextSeq 550 System (RRID:SCR_016381) | instrument resource | The NextSeq 550 System brings the power of a high-throughput sequencing system to your benchtop. With tunable output and high data quality, it provides the flexible power you need for whole-genome, transcriptome, and targeted resequencing. | hardware, instrument, equipment, sequencer, sequencing, dna, rna, platform, nextseq series | Commercially available, Available for purchase | https://drive.google.com/file/d/1QpYWRs6dJVPOehmffnqBvJ-ChEyoJlra/view?usp=drivesdk | SCR_020141 | https://www.illumina.com/content/dam/illumina/gcs/assembled-assets/marketing-literature/nextseq-550-system-spec-sheet-m-gl-01298/nextseq-550-system-spec-sheet-m-gl-01298.pdf | SCR_016381 | NextSeq 550 | 2026-08-01 12:05:31 | 35 | |||||||
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Leica: Vibratome VT1000S Leica: Microsystems Resource Report Resource Website 50+ mentions |
Leica: Vibratome VT1000S Leica: Microsystems (RRID:SCR_016495) | instrument resource | Vibrating blade microtome for sectioning by Leica Biosystems. Used in neurophysiology, neuropathology, experimental pathology, botany (roots and plants) and industry (foams)., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | instrument, histology, equipment, vibrating, blade, microtome, sectioning, vibratome, fix, tissue, neuropathology, pathology | THIS RESOURCE IS NO LONGER IN SERVICE | https://drive.google.com/file/d/1uhQbOLXtoHEZxoHQHcYaNAGk2C4UOUqs/view?usp=drivesdk | https://www.leicabiosystems.com/sites/default/files/media_product-download/2021-03/Leica_VT1000S_IFU_2v4L_en.pdf | https://www.leicabiosystems.com/es/equipo-histologia/microtomos-deslizantes/microtomos-de-cuchillas-vibrantes/detalles/product/leica-vt1000-s/ | SCR_016495 | Leica Vibratome VT1000S Leica Biosystems | 2026-08-01 12:05:44 | 72 | |||||||
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Waters: Andrew Pipetting Robot Resource Report Resource Website |
Waters: Andrew Pipetting Robot (RRID:SCR_022218) | instrument resource | Pipetting Robot offers repeatable, traceable pipetting with connected single and multichannel electronic pipettes. Enables automation of many routine sample preparation workflows. | instrument, equipment, USEDit, pipetting, single and multichannel electronic pipettes, routine sample preparation automation | is used by: Stanford University Vincent Coates Foundation Mass Spectrometry Laboratory Core Facility | https://www.waters.com/webassets/cms/library/docs/andrew_alliance_andrew+_brochure.pdf | SCR_022218 | Waters Andrew+ Pipetting Robot | 2026-08-01 12:07:50 | 0 | |||||||||
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Thermo Fisher: Exploris 240 LC/MS system Resource Report Resource Website 10+ mentions |
Thermo Fisher: Exploris 240 LC/MS system (RRID:SCR_022216) | instrument resource | Exploris 240 system is hybrid quadrupole Orbitrap mass spectrometer with Waters H-Class Acquity, ZipChip, and DART front ends. Flexible platform for wide range of small molecule and intact protein analyses. | instrument, equipment, hybrid quadrupole Orbitrap mass spectrometer, Waters H-Class Acquity, ZipChip, DART, small molecule, intact protein analyses | is used by: Stanford University Vincent Coates Foundation Mass Spectrometry Laboratory Core Facility | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_022216.pdf | Model_Number_Orbitrap_Exploris_240 | SCR_022216 | , Exploris 240 system, Thermo Scientific Orbitrap Exploris 240 LC/MS system | 2026-08-01 12:07:50 | 11 | ||||||||
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Thermo Fisher: Exploris 480 nanoLC/MS system Resource Report Resource Website 1+ mentions |
Thermo Fisher: Exploris 480 nanoLC/MS system (RRID:SCR_022215) | instrument resource | Exploris 480 system is hybrid quadrupole Orbitrap mass spectrometer with Waters M-Class Acquity. Proteomics system for hands on use by highly trained users. | instrument, equipment, hybrid quadrupole Orbitrap mass spectrometer, Waters M-Class Acquity, proteomics system |
uses: Thermo Fisher: Orbitrap Exploris 480 Mass Spectrometer is used by: Stanford University Vincent Coates Foundation Mass Spectrometry Laboratory Core Facility |
SCR_022215 | , Thermo Fisher Orbitrap Exploris 480 nanoLC/MS system with Waters M-Class Acquity, Exploris 480 system | 2026-08-01 12:07:58 | 8 | ||||||||||
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Tecmag Resource Report Resource Website |
Tecmag (RRID:SCR_017369) | organization | Commercial organization, located in Houstion, Texas, USA, for products for magnetic resonance spectroscopy. Manufactures NMR, NQR and amp, MRI instrumentation including nuclear magnetic resonance spectrometers and full consoles, system upgrades, and solid-state NMR / NQR probes. Tecmag was acquired by Avingtrans PLC and became subsidary of Scientific Magnetics Ltd. (UK). | Manufacturer, commercial, organization, NMR, nuclear, magnetic, resonance, spectroscopy, console, equipment | grid.422860.a, Wikidata: Q30283966, ISNI: 0000 0004 4911 2169 | https://ror.org/01d2yj180 | SCR_017369 | Technology for Magnetic Resonance | 2026-08-01 12:06:02 | 0 | |||||||||
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SCIEX: TripleTOF 5600+ Mass Spectrometer System Resource Report Resource Website 1+ mentions |
SCIEX: TripleTOF 5600+ Mass Spectrometer System (RRID:SCR_018053) | instrument resource | Mass spectrometry system that combines SCIEX Triple Quad technology with Accelerator TOF Analyzer, to deliver nominal mass and accurate mass benefits in single platform. Integrates comprehensive, qualitative exploration, rapid profiling, and high-resolution quantitation workflows. | ABRF, mass spectrometer, instrument, equipment | is listed by: USEDit | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018053.pdf | Model_Number_5600 | https://sciex.com/content/dam/SCIEX/pdf/tech-notes/all/tripletof_non_target_screening_identification_AB%20SCIEX.pdf | SCR_018053 | Sciex 6500 QTRAP | 2026-08-01 12:06:17 | 6 | |||||||
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Thermo Fisher: Applied Biosystems: 7500 Real-Time PCR System Resource Report Resource Website 10+ mentions |
Thermo Fisher: Applied Biosystems: 7500 Real-Time PCR System (RRID:SCR_018051) | instrument resource | Real-time PCR system that performs high performance, multicolor real-time PCR. Has five color platform that is calibrated for broadest range of dyes available: FAM, SYBR Green I, VIC, JOE, NED, TAMRA, Cy3, ROX, Texas Red, and Cy5 dyes. Thermal cycling block is built to reduce environmental exposure and contamination risk. | ABRF, PCR, Real-Time PCR, instrument, equipment | is listed by: USEDit | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018051.pdf | Model_Number_7500 | https://assets.thermofisher.com/TFS-Assets/LSG/manuals/4387777d.pdf | SCR_018051 | AB 7500 Fast Real-time PCR System | 2026-08-01 12:06:17 | 19 | |||||||
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BD Biosciences: Canto II Flow Cytometer Resource Report Resource Website 10+ mentions |
BD Biosciences: Canto II Flow Cytometer (RRID:SCR_018056) | instrument resource | Benchtop flow cytometer features reliable performance and accurate results for experiments requiring up to 10 parameters. Fixed alignment flow cell minimizes startup time and improves reproducibility. Patented optical design maximizes signal detection and increases sensitivity and resolution for each color in multicolor assay. | ABRF, Flow Cytometer, benchtop analyzer, cell analyzer, flow cytometry, multicolor analysis, BD FACSCanto II, instrument, equipment | is listed by: USEDit | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018056.pdf | Model_Number_Canto II | https://www.bdbiosciences.com/content/dam/bdb/marketing-documents/BD_FACSCanto_II_brochure.pdf | SCR_018056 | Canto II | 2026-08-01 12:06:17 | 46 | |||||||
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Thermo Fisher: HID Ion GeneStudio S5 Prime System Resource Report Resource Website 10+ mentions |
Thermo Fisher: HID Ion GeneStudio S5 Prime System (RRID:SCR_017984) | instrument resource | Thermo Fisher Ion Torrent Sequencer. Semiconductor based next generation sequencing system that enables simple targeted sequencing workflows. With cartridge based reagents, system is simple to use and offers scalability and flexibility. Uses Ion 5 Series chips to support broad range of forensic applications including mitochondria sequencing, STR analysis, and SNP genotyping. | sequencing machine, hardware, high-throughput sequencing, instrument, equipment | Restricted | https://assets.thermofisher.com/TFS-Assets/LSG/manuals/MAN0017528_Ion_GeneStudio_S5_Instrument_UG.pdf | SCR_017984 | HID Ion GeneStudio™ S5 Prime System | 2026-08-01 12:05:52 | 25 | |||||||||
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Zeiss: LEO 1525 Field Emission Scanning Electron Microscope Resource Report Resource Website 50+ mentions |
Zeiss: LEO 1525 Field Emission Scanning Electron Microscope (RRID:SCR_018039) | instrument resource | Field emission scanning electron microscope that performs ultra high resolution imaging and analysis. Designed for requirements of nano-analysis, chamber of LEO 1525 is capable of accommodating both EDS and full-focusing Wavelength-dispersive X-ray spectroscopy WDS spectrometers as well as rage of other accessories. Coincident and short working distances allow signals from these detectors to be acquired simultaneously. | ABRF, Field Emission Scanning Electron Microscope, instrument, equipment | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018039.pdf | Model_Number_LEO_1525 | http://fy.chalmers.se/~f10mh/Halvarsson/EM_intro_course_files/LEO32%20Software%20Manual.pdf | SCR_018039 | LEO 1525 | 2026-08-01 12:05:53 | 85 | ||||||||
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Thermo Fisher: Ion Personal Genome Machine System Resource Report Resource Website 1+ mentions |
Thermo Fisher: Ion Personal Genome Machine System (RRID:SCR_017983) | Ion PGM System | instrument resource | Thermo Fisher Ion Torrent Sequencer. System combines semiconductor sequencing technology with natural biochemistry to directly translate chemical information into digital data. Coupled with Torrent Suite Software performs preliminary reference genome alignment and outputs data in BAM format for easy downstream analysis with optional third party analysis tools. It can also provide access to web portal for data review and sharing. | sequencing machine, hardware, high-throughput sequencing, instrument, equipment | Restricted | https://assets.fishersci.com/TFS-Assets/LSG/manuals/MAN0007516_IonPGM_System_SPG.pdf | https://www.thermofisher.com/order/catalog/product/4462921#/4462921 | SCR_017983 | Ion Personal Genome Machine (PGM) System, Ion Personal Genome Machine™ (PGM™) System, Ion Personal Genome Machine System | 2026-08-01 12:06:16 | 2 | |||||||
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Perkin Elmer: EnVision 2105 Multimode Plate Reader Resource Report Resource Website 1+ mentions |
Perkin Elmer: EnVision 2105 Multimode Plate Reader (RRID:SCR_018038) | instrument resource | Multimode microplate reader that provides speed, ultra-high throughput, and maximum sensitivity across all detection technologies. Provides higher sensitivity for time-resolved fluorescence TRF applications, and Enhanced Security software option includes tools to facilitate 21 CFR Part 11 compliance for integration into regulated environments GxP. | ABRF, plate reader, Perkin Elmer, detection assay, data analysis, instrument, equipment | is listed by: USEDit | Model_Number_2105 | https://resources.perkinelmer.com/lab-solutions/resources/docs/bro-envision-multimode-plate-reader.pdf | SCR_018038 | Perkin Elmer Envision plate reader | 2026-08-01 12:06:17 | 1 | ||||||||
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Thermo Fisher: Ion Proton System Resource Report Resource Website 1+ mentions |
Thermo Fisher: Ion Proton System (RRID:SCR_017982) | instrument resource | Thermo Fisher Ion Torrent Sequencer. Ion Proton System for Next-Generation Sequencing. Used for accurate high-throughput sequencing. | sequencing machine, hardware, high-throughput sequencing, instrument, equipment | Restricted | https://assets.thermofisher.com/TFS-Assets/LSG/manuals/cms_102673.pdf | SCR_017982 | Ion Proton™ System | 2026-08-01 12:06:09 | 3 | |||||||||
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Agilent: 1200 High Performance Liquid Chromatography System Resource Report Resource Website 1+ mentions |
Agilent: 1200 High Performance Liquid Chromatography System (RRID:SCR_018037) | instrument resource | Liquid chromatography analyzer that achieves high levels of sample throughput by use of either binary or quaternary pumps and interchangeable autosamplers. High pressure operation and use of short columns with small diameter media result in fast, high resolution separations. Features includedu al-lamp design and temperature control of diode array detectors. | ABRF, Liquid Chromatography, Agilent, analytical liquid chromatography, data analysis, automated gradient system, manual sample injection, instrument, equipment | is listed by: USEDit | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018037.pdf | https://www.syntechinnovation.com/images/catalog/advance-analytical/8chromatography/HPLC_Brochure.pdf | SCR_018037 | , Agilent 1200 Series HPLC System, Agilent 1200 Series HPLC, 1200 HPLC | 2026-08-01 12:06:09 | 5 | ||||||||
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JEOL: 1230 Transmission Electron Microscope Resource Report Resource Website 1+ mentions |
JEOL: 1230 Transmission Electron Microscope (RRID:SCR_018036) | instrument resource | High performance, high contrast, 40-120kV transmission electron microscope that performs imaging for biological and materials science applications. | ABRF, Transmission Electron Microscope, instrument, equipment | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018036.pdf | Model_Number_1230 | https://microscopy.nri.ucsb.edu/sites/microscopy.nri.ucsb.edu/files/docs/instructions_for_jeol_1230_em_0.pdf | SCR_018036 | JEM 1230 Transmission Electron Microscope | 2026-08-01 12:06:17 | 2 | ||||||||
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Oxford: Nanopore Technologies MinION Resource Report Resource Website 100+ mentions |
Oxford: Nanopore Technologies MinION (RRID:SCR_017985) | instrument resource | Portable, real time device for DNA and RNA sequencing, putting you in control of your sequence data. Portable DNA/RNA sequencing by Oxford Nanopore Technologies. | sequencing machine, hardware, high-throughput sequencing, instrument, equipment |
is related to: NanoporeTech: GridION Mk1 is related to: Oxford: Nanopore Technologies: PromethION |
Restricted | https://nanoporetech.com/sites/default/files/s3/literature/MinION-Mk1C-brochure.pdf | SCR_017985 | 2026-08-01 12:06:09 | 107 | |||||||||
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Molecular Devices: Molecular Dynamics Storm 840 Molecular Imager Resource Report Resource Website |
Molecular Devices: Molecular Dynamics Storm 840 Molecular Imager (RRID:SCR_018031) | instrument resource | Molecular imager system for performing gel and blot analysis. This system provides both PhosphorImager capabilities along with non-radioactive fluorescent labeling techniques-direct fluorescence and chemifluorescence. It can be used for non-radioactive gel and blot analysis methods or radioisotope techniques. Storm 840 scans storage phosphor screens plus fluorescent gels and chemifluorescent blots in the 35 x 43 cm scanning area. | ABRF, molecular imager, GE HealthCare, gel, blot, macromolecular analysis, instrument, equipment | is listed by: USEDit | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018031.pdf | Model_Number_840 | https://btiscience.org/wp-content/uploads/2014/04/Storm_User_Manual.pdf | https://www.mbl.edu/jbpc/files/2014/05/Storm_Info.pdf | SCR_018031 | Storm Gel and Blot Imaging System, Storm 840 Molecular Imager, Molecular Dynamics Storm 840 Phosphorimager Scanner | 2026-08-01 12:06:17 | 0 | ||||||
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AGFA: CP1000 Automatic Film Processor Resource Report Resource Website |
AGFA: CP1000 Automatic Film Processor (RRID:SCR_018030) | instrument resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 10,2024. Automatic film processor for low-volume processing or back-up purposes. Its features include fast start up (7 minutes from cold start) and 125-second cycle time. Uses simple, accessible film transport system with fewer rollers than conventional heavy roller racks, infrared dryer instead of hot-air dryer, 400 watts of power when in operation and 100 watts in standby mode, and automatic temperature control and drying. | ABRF, film developer, film processor, instrument, equipment | is listed by: USEDit | THIS RESOURCE IS NO LONGER IN SERVICE | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_018030.pdf | Model_Number_AGFA_CP1000 | https://www.service-power.at/wp-content/uploads/2014/04/Agfa-CP-1000_EN.pdf | SCR_018030 | AGFA CP1000 Film Developer | 2026-08-01 12:06:09 | 0 |
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