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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
FlyPi
 
Resource Report
Resource Website
FlyPi (RRID:SCR_021563) data or information resource, project portal, instrument resource, portal Portal provides open source and affordable microscope experimental setup device based on Raspberry Pi, Arduino microcontroller and off-the-shelf electronic components. System design is based on 3D-printed mainframe, Raspberry Pi computer, and high definition camera system as well as Arduino based optical and thermal control circuits. All functions of FlyPi can be controlled through custom written graphical user interface. Instrument, microscope experimental system, Raspberry Pi, Arduino microcontroller, high definition camera system, Arduino, optical control circuits, thermal control circuits, OpenBehavior is listed by: OpenBehavior DOI:10.1371/journal.pbio.2002702 Free, Freely available SCR_021563 2026-08-05 10:47:28 0
Teensy-Based Interface project
 
Resource Report
Resource Website
Teensy-Based Interface project (RRID:SCR_021560) data or information resource, project portal, instrument resource, portal Portal provides Teensy-Based Interface system. System includes Teensy 3.2 microcontroller based interface that is easily programmable, and offers high speed, precisely timed behavioral data acquisition and digital and analog outputs for controlling sCMOS cameras and other devices. Developed by Boston University scientists. Instrument, Teensy microcontrollers, Teensy interface, sCMOS camera, camera control, behavioral experiments, OpenBehavior is listed by: OpenBehavior
is related to: Teensy-Based Interface
has parent organization: Boston University; Massachusetts; USA
DOI:10.1016/j.jneumeth.2019.03.019 Free, Freely available SCR_021560 Teensy-Based Interface 2026-08-05 10:47:28 0
Airtrack
 
Resource Report
Resource Website
1+ mentions
Airtrack (RRID:SCR_021561) data or information resource, project portal, instrument resource, portal Portal provides head fixed behavioral environment that uses lightweight physical maze floating on air table that moves around animals body under direct control of animal itself. Instrument, head fixed, behavioral environment, lightweight physical maze, maze floating on air table, table moves around animal, real world floating environment, OpenBehavior is listed by: OpenBehavior
has parent organization: Humboldt University of Berlin; Berlin; Germany
DOI:10.1152/jn.00088.2016 Free, Freely available SCR_021561 2026-08-05 10:47:29 1
DIY Rodent Running Disk
 
Resource Report
Resource Website
DIY Rodent Running Disk (RRID:SCR_021558) data or information resource, project portal, instrument resource, portal Portal related to Rodent Running Disk. Provided Rodent Running Disk was developed by University of California, Berkeley scientist. Acrylic disk mounted to optical encoder to achieve fast locomotion decoding. Instrument, rodent running disk, acrylic disk, OpenBehavior is listed by: OpenBehavior
has parent organization: University of California at Berkeley; Berkeley; USA
DOI:10.1016/j.neuron.2017.12.021 Free, Freely available SCR_021558 2026-08-05 10:47:29 0
SignalBuddy
 
Resource Report
Resource Website
SignalBuddy (RRID:SCR_021553) data or information resource, project portal, instrument resource, portal Portal related to signal generation. Provided system was developed by Columbia University scientists. System includes signal generator for scientific applications which generates digital or true analog signals (sine waves, step functions, and pulse trains) and can be controlled with intuitive serial monitor interface. Instrument, signal generator, sine waves, step functions, pulse trains, OpenBehavior is listed by: OpenBehavior
has parent organization: Columbia University; New York; USA
Free, Freely available SCR_021553 2026-08-05 10:47:26 0
Actifield project
 
Resource Report
Resource Website
1+ mentions
Actifield project (RRID:SCR_021452) data or information resource, project portal, instrument resource, portal Project related to measuring locomotor activity.System includes infrared motion detection and arduino to record activity in variety of chamber set ups. Provides actimeter and software tool to measure and record locomotor activity. Measure locomotor activity, record locomotor activity, rodent locomotor activity, OpenBehavior, Instrument is listed by: OpenBehavior DOI:10.1016/j.ohx.2018.e00047 Free, Freely available SCR_021452 Actifield 2026-08-05 10:47:27 1
Craniobot project
 
Resource Report
Resource Website
Craniobot project (RRID:SCR_021573) data or information resource, project portal, instrument resource, portal Portal provides computer numerical controlled robot for cranial microsurgeries developed by University of Minnesota scientist. Included cranial microsurgery platform combines automated skull surface profiling with computer numerical controlled milling machine to perform variety of cranial microsurgical procedures on mice. Instrument, removing skull sections, access brain, computer numerical controlled robot, cranial microsurgeries robot, OpenBehavior is listed by: OpenBehavior
is related to: craniobot
has parent organization: University of Minnesota Twin Cities; Minnesota; USA
DOI:10.1038/s41598-018-37073-w Free, Freely available SCR_021573 Craniobot 2026-08-05 10:47:29 0
pyControl project
 
Resource Report
Resource Website
pyControl project (RRID:SCR_021574) data or information resource, project portal, instrument resource, portal Portal provides system that combines open source hardware and software for control of behavioral experiments. Open source framework, combines Python scripts and Micropython microcontroller. Framework can be run through command line interface, or in user friendly graphical user interface that allows users to manage variety of devices such as nose pokes, LED drivers, stepper motor controllers and more. Data collected using this system can then be imported into Python for data analysis. Instrument, Micropython microcontroller, Python scripts, behavioral experiment control, OpenBehavior is listed by: OpenBehavior
is related to: pyControl
Free, Freely available SCR_021574 pyControl system 2026-08-05 10:47:27 0
PhotometryBox
 
Resource Report
Resource Website
PhotometryBox (RRID:SCR_021571) data or information resource, project portal, instrument resource, portal Portal provides open source control system for in vivo fluorescence measurements from deep brain structures developed by University of California, San Francisco scientists. Microcontroller based solution for controlling optical components in intracranial photometry system and processing resulting signal. Instrument, fluorescence measurements, deep brain structures, optical fibers, intracranial photometry system, OpenBehavior is listed by: OpenBehavior
has parent organization: University of California at San Francisco; California; USA
DOI:10.1016/j.jneumeth.2018.10.022 Free, Freely available SCR_021571 2026-08-05 10:47:27 0
Rodent Activity Detector project
 
Resource Report
Resource Website
Rodent Activity Detector project (RRID:SCR_021451) RAD data or information resource, project portal, instrument resource, portal Project related to tracking and recording activity in rodent home cages.Provides device that utilizes passive infrared (PIR) sensor to detect movement in cages and logs data to microSD card. Device is wireless and battery powered, and can record data for about 3 weeks on charge. Passive infrared sensor, detect movement in cages, logs data to microSD card, wireless device, battery powered device, record data, instrument, equipment, USEDit, OpenBehavior, Instrument is listed by: OpenBehavior DOI:10.1523/eneuro.0160-19.2019 Free, Freely available SCR_021451 Rodent Activity Detector 2026-08-05 10:47:26 0
Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology project
 
Resource Report
Resource Website
Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology project (RRID:SCR_021572) HOPE data or information resource, project portal, instrument resource, portal Portal provides brain implant developed by MIT scientists. Implant carries 16 movable tetrodes along with two optic fibers or two injection cannulas. Designed with help of 3D CAD software, allowing modifications for various experimental needs, such as targeting different brain regions and use in other animal species (e.g., rats and non-human primates). Implant can be designed to shape of skull of individual monkeys based on pre-implantation magnetic resonance imaging, thus optimizing fit with skull surface and making recording from deep brain regions more reliable. Instrument, neural implant, brain implant, manipulate neuronal activity, OpenBehavior is listed by: OpenBehavior
is related to: Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology
has parent organization: Massachusetts Institute of Technology; Massachusetts; USA;
DOI:10.3389/fncir.2018.00041 Free, Freely available SCR_021572 Pharmacology, and Electrophysiology, Hybrid-drive combining Optogenetics, Hybrid drive combining Optogenetics 2026-08-05 10:47:29 0
CerebraLux
 
Resource Report
Resource Website
CerebraLux (RRID:SCR_021570) data or information resource, project portal, instrument resource, portal Portal provides low cost, open source, wireless probe for optogenetic stimulation. This wireless system for optogenetic stimulation was developed by UCLA scientists. Device consists of two parts. Optical component is mounted on head permanently, whereas electronic component is removable and is applied for each experiment. Device is controlled via custom GUI (built with the TkInter Python 2.7 library) which sends pulses to device via Arduino Uno. Instrument, optogenetic stimulation, wireless system, OpenBehavior is listed by: OpenBehavior
has parent organization: University of California at Los Angeles; California; USA
DOI:10.1117/1.nph.4.4.045001 Free, Freely available SCR_021570 2026-08-05 10:47:29 0
Nose Poke Device
 
Resource Report
Resource Website
Nose Poke Device (RRID:SCR_021568) data or information resource, project portal, instrument resource, portal Portal provides arduino based, 3D-printed nose poke device for rats. Includes set of instructions on how to build this device using arduino, some 3D printed parts and some off-the-shelf electronic components. Instrument, nose poke device, device for rats, arduino, 3D printed parts, electronic components, OpenBehavior is listed by: OpenBehavior
is related to: poke device arduino
Free, Freely available SCR_021568 2026-08-05 10:47:27 0
Automated Home Cage Rodent Two bottle Choice Test project
 
Resource Report
Resource Website
Automated Home Cage Rodent Two bottle Choice Test project (RRID:SCR_021445) data or information resource, project portal, instrument resource, portal Project related to studies of liquid ingestive behaviors used in neuroscience to investigate reward related behavior, metabolism, and circadian biology. Provides automated home cage sipper device for monitoring liquid ingestive behavior in rodents developed by Washington University, St. Louis scientists. Homecage fitted apparatus for automated, photobeam based detection of licks in two bottle choice task. Automated home cage sipper device, Sipper, monitoring liquid, ingestive behavior, rodents, instrument, equipment, USEDit, OpenBehavior, Instrument is listed by: OpenBehavior
is related to: SipperViz
DOI:10.1523/eneuro.0292-19.2019 Free, Freely available SCR_021445 Automated Home Cage Rodent Two bottle Choice Test 2026-08-05 10:47:26 0
Pearce Lab Syringe Pump project
 
Resource Report
Resource Website
Pearce Lab Syringe Pump project (RRID:SCR_021566) data or information resource, project portal, instrument resource, portal Open source syringe pump apparatus developed by scientists from Michigan Technological University. Syringe pump is designed using freely available open source computer aided design (CAD) software and manufactured using open source RepRap 3-D printer and readily available parts. Instrument, syringe pump apparatus, OpenBehavior is listed by: OpenBehavior
is related to: linear actuator
has parent organization: Michigan Technological University; Houghton; USA
DOI:10.1371/journal.pone.0107216 Free, Freely available SCR_021566 Pearce Lab Syringe Pump 2026-08-05 10:47:29 0
Platform for Acoustic STArtle project
 
Resource Report
Resource Website
Platform for Acoustic STArtle project (RRID:SCR_021446) PASTA, ratPASTA data or information resource, project portal, instrument resource, portal Project related to multifunctional neurobehavioral system developed by scientists at University of Zagreb School of Medicine, Zagreb, Croatia.System includes hardware and software tools.Provides software package for processing and visualising data from startle experiments in rodents or experiments measuring grip strength in rodents. Startle experiments, rodent, experiments measuring rodents grip strength, OpenBehavior, Instrument is listed by: OpenBehavior
is related to: Platform for Acoustic STArtle
DOI:10.1038/s41598-021-82710-6 Free, Freely available SCR_021446 Platform for Acoustic STArtle 2026-08-05 10:47:27 0
Operant Box for Auditory Tasks project
 
Resource Report
Resource Website
Operant Box for Auditory Tasks project (RRID:SCR_021564) data or information resource, project portal, instrument resource, portal Portal provides operant box designed to train small primates in auditory tasks.Device is based on computer and Arduino Mega 2560 board, named OBAT (Operant Box for Auditory Tasks), designed to present two different auditory stimuli to small primates.All schematics and software source code are available. Instrument, operant box, train small primates, auditory tasks, OpenBehavior is listed by: OpenBehavior
is related to: Operant Box for Auditory Tasks
DOI:10.3758/s13428-017-0906-6 Free, Freely available SCR_021564 Operant Box for Auditory Tasks 2026-08-05 10:47:29 0
Rodent Operant Bucket project
 
Resource Report
Resource Website
Rodent Operant Bucket project (RRID:SCR_021565) data or information resource, project portal, instrument resource, portal Portal for open source operant chamber, based on Arduino microcontroller platform, that can be used to train mice to respond for reward. Designed by NIDDK scientists.Apparatus contains two nose pokes, drinking well, and solenoid controlled sucrose delivery system. Chamber can run magazine training, fixed ratio and progressive ratio training schedules, and can be programmed to run more complicated behavioral paradigms. Instrument, operant chamber, Arduino microcontroller platform, train mice, reward respond, OpenBehavior is listed by: OpenBehavior
is related to: NIDDK- National Institute of Diabetes and Digestive and Kidney Diseases Obesity Resources
is related to: Rodent Operant Bucket
DOI:10.3758/s13428-015-0603-2 Free, Freely available SCR_021565 Rodent Operant Bucket, ROBucket 2026-08-05 10:47:27 0
LocoWhisk project
 
Resource Report
Resource Website
1+ mentions
LocoWhisk project (RRID:SCR_021430) data or information resource, project portal, instrument resource, portal Portable behavioural set up that incorporates both gait analysis (using pedobarograph) and whisker movements (using high speed video camera and infrared light source).Automatically records both whisker and gait information and provides added statistical tools to analyse data. LocoWhisk system includes ARTv2 software for simultaneous measurement of locomotion behaviours and whisker movements. Simultaneous measurement, locomotion behaviours, whisker movements, rodent behaviour, OpenBehavior, Instrument is listed by: OpenBehavior DOI:10.1016/j.jneumeth.2019.108440 Free, Freely available SCR_021430 LocoWhisk 2026-08-05 10:47:26 1
OpenFeeder
 
Resource Report
Resource Website
OpenFeeder (RRID:SCR_021552) data or information resource, project portal, instrument resource, portal Project related to studying reward and feeding behavior. Provides open source automatic feeding system that can be customized for food types from seeds to pellets.System integrates plexiglass tubes, Arduino Uno, motor driver, and piezo sensor to reliably deliver accurate amounts of food, and can also be built using 3D printed parts. Instrument, automatic feeding system, customized for food types, plexiglass tubes, Arduino Uno, motor driver, piezo sensor, deliver accurate amounts of food, 3D printed parts, OpenBehavior is listed by: OpenBehavior DOI:10.1016/j.ohx.2016.09.001 Free, Freely available SCR_021552 2026-08-05 10:47:29 0

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