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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Rigbox Resource Report Resource Website 1+ mentions |
Rigbox (RRID:SCR_021517) | data management software, software resource, software application | Open source software MATLAB toolbox for running behavioral neuroscience experiments and managing data.Used for probing neurons and behavior. Used for managing behavioral neuroscience experiments and acquiring experiment related data. | Managing behavioral neuroscience experiments, running behavioral neuroscience experiments, managing data, acquiring experiment related data, OpenBehavior |
is listed by: OpenBehavior is related to: Rigbox project |
DOI:10.1523/eneuro.0406-19.2020 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/rigbox/ | SCR_021517 | 2026-08-11 09:44:12 | 5 | ||||||||
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NIH NCI list of FDA approved cancer drugs Resource Report Resource Website 10+ mentions |
NIH NCI list of FDA approved cancer drugs (RRID:SCR_021841) | data or information resource, topical portal, portal, disease-related portal | Portal to find consumer friendly information about drugs for cancer and conditions related to cancer. The list is in alphabetical order by generic name and brand name. | drugs for cancer, conditions related to cancer, alphabetical order, generic name, brand name | cancer | Free, Available for download, Freely available | SCR_021841 | 2026-08-11 09:44:15 | 16 | ||||||||||
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Atherosclerosis Risk in Communities Resource Report Resource Website 10+ mentions |
Atherosclerosis Risk in Communities (RRID:SCR_021769) | ARIC | data or information resource, topical portal, portal, disease-related portal | Platform for prospective epidemiologic study conducted in four U.S. communities. One of most significant and longest running heart health studies and is the largest study of heart health in African Americans. ARIC investigates risk factors for heart disease and stroke, and connections between cardiovascular and cognitive health. ARIC includes two parts: Cohort Component and Community Surveillance Component. Cohort Component began in 1987, and each ARIC field center randomly selected and recruited cohort sample of individuals aged 45-64 from defined population in their community, to receive extensive examinations, including medical, social, and demographic data. In Community Surveillance Component, four communities are investigated to determine long term trends in hospitalized myocardial infarction and coronary heart disease deaths in men and women aged 35-84 years. | Heart health studies, epidemiologic study, heart disease risk factors, stroke risk factors, cardiovascular and cognitive health connection, atherosclerosis risk | coronary heart disease, stroke, myocardial infarction, atherosclerosis | NHLBI | PMID:2646917 PMID:34112321 |
Free, Freely available | SCR_021769 | The Atherosclerosis Risk in Communities (ARIC) Study | 2026-08-11 09:44:15 | 43 | ||||||
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University of Puerto Rico Caribbean Primate Research Center Resource Report Resource Website 50+ mentions |
University of Puerto Rico Caribbean Primate Research Center (RRID:SCR_021920) | CPRC | biomaterial supply resource, organism supplier, material resource | Facilitates supply of conventional and specific pathogen free nonhuman primates and biological samples. Priority is given to NIH-funded investigators in universities, NIH Intramural Program, and contractors working on behalf of researchers conducting experiments under NIH-funded programs. Non-NIH-funded investigators may still be considered depending on resource availability.To request for CPRC animals, authorized representative of institution will need to submit Animal Allocation Request form. | CPRC Resource Distribution, rhesus macaques, nonhuman primates supply, biological samples supply, resource distribution, Conventional and Specific Pathogen Free nonhuman primates | has parent organization: University of Puerto Rico; Puerto Rico; USA | Restricted | SCR_021920 | University of Puerto Rico Caribbean Primate Research Center Resource Distribution Core | 2026-08-11 09:44:16 | 76 | ||||||||
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robvis Resource Report Resource Website 100+ mentions |
robvis (RRID:SCR_018755) | robvis | software toolkit, web application, software resource | Software R package and web app, which facilitates rapid production of publication quality risk of bias assessment figures. Used to produce high quality figures that summarize the risk-of-bias assessments performed as part of systematic review or research synthesis project. | Risk of bias assessment, publication figure, publication quality figure, figure production, systematic review, research synthesis project | is related to: Shiny | University of Bristol ; University Hospitals Bristol NHS Foundation Trust |
DOI:10.1002/jrsm.1411 | Free, Freely available | SCR_018755 | Risk Of Bias VISualization | 2026-08-11 09:43:48 | 100 | ||||||
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Guide Design Resources Resource Report Resource Website 100+ mentions |
Guide Design Resources (RRID:SCR_018982) | data or information resource, portal, laboratory portal, organization portal | Laboratory portal about research including new approaches for precision gene editing, delivery of molecular and genetic cargo, discovery of novel programmable systems, and engineering of immune system to develop next generation of therapeutics. Provides collection of tools for guide design.CRISPR.MIT.EDU of Guide Design Tools is no longer available, documented on August 28,2020. | Guide desin tools, precision gene editing, immune system engineering, next generation therapeutics, guide design | has parent organization: Broad Institute | Free, Freely available | SCR_018982 | 2026-08-11 09:44:02 | 353 | ||||||||||
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Hiroshima University Amphibian Research Center Resource Report Resource Website 10+ mentions |
Hiroshima University Amphibian Research Center (RRID:SCR_019015) | ARC, HUARC | biomaterial supply resource, organism supplier, material resource | Stock center that provides amphibian organisms, frogs and newts, primarily to Japanese investigators. The center runs the National BioResource Project (NBRP) Clawed frogs / Newts, which is financially supported by the Ministry of Education, Culture, Sports, Science and Technology (MEXT), Japan, to distribute these resources. Contributes to maintenance of biologically important strains of frogs and study biological characteristics of amphibian focusing genetics, developmental regulation, speciation, phylogeny, phenotype expression, and environment-induced mutagenesis. | Amphibian, Frog, Xenopus, Newt, Hiroshima University | Ministry of Education ; Culture ; Sports ; Science and Technology (MEXT) |
https://xenopus.nbrp.jp/NBRP_Xenopus/NBRP_X._tropicalis_Top_Page_EN.html | SCR_019015 | Amphibian Research Center, Institute for Amphibian Biology | 2026-08-11 09:44:05 | 10 | ||||||||
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BioSimulators Resource Report Resource Website 1+ mentions |
BioSimulators (RRID:SCR_019111) | software repository, web application, software resource | Web tool as collection of containerized biosimulation tools that provide consistent interfaces and guide to choosing simulator. Helps to find simulation tools that have capabilities, including supported modeling frameworks, simulation algorithms, and modeling formats, needed for specific modeling projects. | Containerized biosimulation tools, consistent interfaces, choosing simulator guide, supported modeling frameworks, simulation algorithms, modeling formats, bio.tools |
is used by: runBioSimulations is listed by: bio.tools is listed by: Debian |
Center for Reproducible Biomodeling Modeling ; National Institute of Bioimaging and Bioengineering ; National Institute of General Medical Sciences ; National Institutes of Health ; National Science Foundation |
Free, Freely available | biotools:biosimulators | https://bio.tools/biosimulators | SCR_019111 | 2026-08-11 09:43:53 | 5 | |||||||
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Numbat Resource Report Resource Website 10+ mentions |
Numbat (RRID:SCR_019207) | data management software, software resource, software application | Software tool for managing extraction of large volumes of data from primary sources among multiple users, and then reconciling differences between them. Designed for use in systematic review projects in academic context. | Manage large references databases, large data, manage different extraction levels, multiple extraction forms, codebooks, reference network generation, publication database, systematic review, academic context | Free, Available for download, Freely available | https://github.com/bgcarlisle/Numbat, https://numbat.bgcarlisle.com | SCR_019207 | Numbat Systematic Review Manager | 2026-08-11 09:44:04 | 11 | |||||||||
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Urinary Stone Disease Research Network Resource Report Resource Website |
Urinary Stone Disease Research Network (RRID:SCR_019059) | USDRN | data or information resource, topical portal, portal, disease-related portal | Portal for research on urinary stones in adults and children in order to learn more about who forms kidney stones, treatments and prevention. Network comprises of experts including adult and pediatric urologists, adult and pediatric nephrologists, pediatricians, emergency department physicians, clinical trialists, nutritionists, behavioral scientists, and radiologists. Duke Clinical Research Institute is Scientific Data Research Center and with clinical sites including University of Pennsylvania Children Hospital of Philadelfia, University of Texas Southwestern Medical Center, University of Washington, Washington University in St. Louis, work together in planning, executing, and analyzing results from USDRN studies. | Urinary stone, kidney stone, kidney, treatment, prevention, urologist, nephrologist, pediatrician, clinical trial, data |
is related to: Duke University School of Medicine; North Carolina; USA is related to: University of Pennsylvania; Philadelphia; USA is related to: University of Texas System; Texas; USA is related to: Washington University in St. Louis; Missouri; USA is related to: University of Washington; Seattle; USA |
Kidney stones | NIH ; NIDDK |
Free, Freely available | SCR_019059 | 2026-08-11 09:44:03 | 0 | |||||||
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thesugarscience Resource Report Resource Website 1+ mentions |
thesugarscience (RRID:SCR_020250) | data or information resource, topical portal, portal, disease-related portal | Interactive digital platform helping scientists who study type 1 diabetes connect, collaborate, and gain funding for their best ideas. All volunteer team has received much positive support from the global population of scientists studying type 1 diabetes, as well as from Beyond Type 1, JDRF, and IPITA. Provides curated conversations, events and technology to scientific T1D focused audience. Non profit entity funded by donations and sponsorships with industry and academic partners to provide unique collaborative benefits and programs to researchers in the T1D academic research community. | Type 1 diabetes support, collaborative benefits, programs, T1D academic research community | Type 1 diabetes, Diabetes | Free, Freely available | SCR_020250 | 2026-08-11 09:44:06 | 1 | ||||||||||
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Bio-Rad: ZE5 Cell Analyzer Resource Report Resource Website 1+ mentions |
Bio-Rad: ZE5 Cell Analyzer (RRID:SCR_019712) | instrument resource | BioRad ZE5 was formerly known as the Propel Labs YETI Cytometer with configurations to meet broad range of experimental complexities and throughput needs. Accessible for novice flow cytometry users yet flexible enough for most experienced flow cytometry professionals. | Bio Rad, Cytometer, Instrument, Equipment, Usedit | Commercially available | SCR_019713, Model_Number_ZE5, SCR_019717 | SCR_019712 | , Bio-Rad ZE5 Cell Analyzer Flow Cytometer, BioRad ZE5, Bio-Rad ZE5/Yeti Cell Analyzer Flow Cytometer | 2026-08-11 09:43:58 | 9 | |||||||||
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Python based Relational Animal Tracking Resource Report Resource Website 1+ mentions |
Python based Relational Animal Tracking (RRID:SCR_021014) | PyRAT | data management software, software resource, software application | Software tool for management of animal facility data by Scionics Computer Innovation GmbH. Used by laboratory animal facilities. Used by researchers, animal house managers, animal keepers and others to access their data from same source. Available in English, French, German, Italian, Portuguese and Spanish. | Animal facility data, animal facility data management, Scionics Computer Innovation GmbH, | Restricted | SCR_021014 | PyRAT animal facility | 2026-08-11 09:44:09 | 1 | |||||||||
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BrainSpan Resource Report Resource Website 1+ mentions |
BrainSpan (RRID:SCR_004219) | data or information resource, atlas, expression atlas | Atlas of developing human brain for studying transcriptional mechanisms involved in human brain development. One of the BrainSpan datasets, Exon microarray summarized to genes, is presented. It is a downloadable archive of files containing normalized RNA-Seq expression values for analysis. | brain, development, brain development, exon, microarray, gene, rna-seq, expression value, expression |
is used by: NIF Data Federation has parent organization: Allen Human Brain Atlas: BrainSpan (Atlas of the Developing Brain) |
Free, Freely available | nlx_98194, nlx_86215, SCR_004877, SCR_005029, SCR_004344, nlx_37081, nlx_2397 | http://brainspan.org/rnaseq/downloads.html?format=html, http://brainspan.org/docs.html | http://brainspan.org/docs.html | SCR_004219 | BrainSpan: RNA-Seq exons, BrainSpan - Exon microarray summarized to genes | 2026-08-12 10:48:57 | 3 | ||||||
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Vascular Access Society of the Americas Resource Report Resource Website |
Vascular Access Society of the Americas (RRID:SCR_004058) | VASA | data or information resource, community building portal, portal | Society devoted to the advancement of the field of dialysis access through research, education and advocacy for patients with end stage kidney disease. They provide vascular access education for physicians, nurses, and other health care professionals and advocate for evidenced-based best clinical practices. | dialysis, kidney, clinical, vascular | is related to: Kidney Health Initiative | End stage kidney disease | nlx_158492 | SCR_004058 | 2026-08-12 10:48:55 | 0 | ||||||||
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St. Louis University Department of Neurology and Psychiatry Resource Report Resource Website |
St. Louis University Department of Neurology and Psychiatry (RRID:SCR_004297) | SLU DNP | data or information resource, department portal, portal, organization portal | The Department of Neurology & Psychiatry aims to 1) provide the best psychiatric and neurological care to patients and their families, 2) discover and investigate new treatments for psychiatric and nervous system disorders, 3) study psychosocial processes in psychiatric and neurological illness, and 4) educate the next generation of practitioners, as well as our patients and the lay community. The Department of Neurology & Psychiatry (DNP) was established on June 1, 2007. The Department has 34 faculty members and is planning continued expansion. There are 7 psychiatrists, 18 neurologists, 4 child neurologists, and 5 NIH-supported PhD investigators. The DNP is one of five departments in the country that combines the disciplines of neurology and psychiatry. We are unique in having two strong residency programs and are the only that attempts to establish a new paradigm in care of patients with neurological and psychiatric disease through co-management initiatives. * Division of Psychiatry: The Psychiatrists work within four areas: Adult, Geriatric, Community, and Forensic Psychiatry. * Division of Neurology: The division has an extremely active stroke/intensive care and general neurology service. We are expanding services in neurocritical care and interventional neurology. * Education: The DNP has approximately 25 residents/fellows in each discipline. * Research: The DNP has robust programs in clinical, basic, and translational research. We emphasize 3 areas in this overview of the DNP. ** Clinical Research Unit ** Psychosocial Processes Group ** Translational Neuromuscular Disease VISION STATEMENT All members of the Saint Louis University Department of Neurology & Psychiatry will collaborate to support state-of-the-art neurological and psychiatric education, compassionate patient care, and a growing research enterprise. The Department will develop the most exciting intellectual environment in the Nation for investigation, treatment, and training in psychiatry and neurology. We will fulfill this Vision in an environment of mutual respect and collaboration. | neurology, psychiatry, neurological intensive care, cerebrovascular disease, neuromuscular disorder, pediatric neurology, neuro-ophthalmology, sleep disorder, spinal cord disorder, neurologic rehabilitation, stroke, multiple sclerosis, adult, child, human |
has parent organization: Saint Louis University School of Medicine; Missouri; USA is parent organization of: St. Louis University Alzheimer's Brain Bank |
nlx_144149 | SCR_004297 | SLU Department of Neurology & Psychiatry, St. Louis University Department of Neurology Psychiatry, St. Louis University Department of Neurology & Psychiatry | 2026-08-12 10:48:57 | 0 | ||||||||
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TAGS Resource Report Resource Website 100+ mentions |
TAGS (RRID:SCR_004294) | TAGS | software application, data processing software, time-series analysis software, software resource, data analysis software | Software tool for gene set enrichment analysis for expression time series, which can incorporate existing knowledge and analyze the dynamic property of a group of genes that have functional or structural associations. The installation file is for Windows., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | gene, enrichment analysis, time series, function, structure, bio.tools |
is listed by: bio.tools is listed by: Debian has parent organization: Tsinghua University; Beijing; China |
THIS RESOURCE IS NO LONGER IN SERVICE | biotools:tags, nlx_31187 | https://bio.tools/tags | http://166.111.130.26/member/yliu/TAGS/ | SCR_004294 | 2026-08-12 10:48:58 | 139 | ||||||
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Data Scientist Training for Librarians Resource Report Resource Website |
Data Scientist Training for Librarians (RRID:SCR_004124) | DST4L | data or information resource, short course material, narrative resource, training resource, training material, short course, blog | An experimental course and blog offered by the Harvard-Smithsonian Center for Astrophysics John G. Wolbach Library and the Harvard Library to train librarians to respond to the growing data needs of their communities. Data science techniques are becoming increasingly important to all fields of scholarship. In the hands-on course, librarians learn the latest tools for extracting, wrangling, storing, analyzing, and visualizing data. By experiencing the research data lifecycle themselves, librarians develop the data savvy skills that can help transform the services they offer. Material will be made available via the DST4L website as it progresses. | librarian, data source, data extraction, data cleansing, data sharing, visualization, presentation | has parent organization: Harvard University; Cambridge; United States | Free, Open to beginner librarians outside of Harvard | nlx_158607 | SCR_004124 | Data Savvy Librarians | 2026-08-12 10:48:56 | 0 | |||||||
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neurodebian Resource Report Resource Website 10+ mentions |
neurodebian (RRID:SCR_004401) | NeuroDebian | software development environment, software development tool, software repository, software application, source code, data processing software, software resource, data distribution software | Collection based on a collaborative effort of popular neuroscience research software for the Debian operating system as well as Ubuntu and other derivatives. Popular packages include AFNI, FSL, PyMVPA and many others. It contains both unofficial or prospective packages which are not (yet) available from the main Debian archive, as well as backported or simply rebuilt packages also available elsewhere. A listing of current and planned projects is available if you want to get involved. The main goal of the project is to provide a versatile and convenient environment for neuroscientific research that is based on open-source software. To this end, the project offers a package repository that complements the main Debian (and Ubuntu) archive. NeuroDebian is not yet another Linux distribution, but rather an effort inside the Debian project itself. Software packages are fully integrated into the Debian system and from there will eventually migrate into Ubuntu as well. With NeuroDebian, installing and updating neuroscience software is no different from any other part of the operating system. Maintaining a research software environment becomes as easy as installing an editor. There is also virtual machine to test NeuroDebian on Windows or Mac OS. If you want to see your software packaged for Debian, please drop them a note. | linux, linux distribution, virtual machine, fmri, eeg, pymvpa, python, r, debian, brain image, neuroscience, platform, afni brik, bshort, bfloat, console (text based), dicom, domain independent, freebsd, gnome, kde, linux, minc2, nifti, philips par/rec, development environment, posix/unix-like, system administrator, web environment |
lists: MRIcron is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: ITK-SNAP is related to: NITRC Computational Environment is related to: PyMVPA is related to: MRtrix has parent organization: Debian has parent organization: Dartmouth College; New Hampshire; USA has parent organization: Otto-von-Guericke University Magdeburg; Saxony-Anhalt; Germany is parent organization of: VoxBo is parent organization of: Computational Morphometry Toolkit |
PMID:23055966 | GNU General Public License v3, The community can contribute to this resource | nlx_143723 | http://www.nitrc.org/projects/neurodebian | SCR_004401 | Debian Neuroscience Repository, neuro debian | 2026-08-12 10:48:59 | 41 | |||||
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Digital Access to Scholarship at Harvard Resource Report Resource Website |
Digital Access to Scholarship at Harvard (RRID:SCR_004122) | DASH | service resource, data or information resource, database, data repository, storage service resource | Harvard University''s central service for sharing and preserving work. In addition to the scholarly journal articles targeted by Harvard''s several open access resolutions, DASH maybe used to self-archive manuscripts and materials. DASH supports a variety of file formats, and users are encouraged to deposit related materials with manuscripts (including data, images, audio and video files, etc.) When users deposit their work in DASH, it becomes visible to colleagues around the world by virtue of metadata harvesting, Google Scholar, and other indexing services. Higher visibility leads to higher rates of citation and impact. When users post early versions of their work, before publication, they establish intellectual priority sooner. Users act in their own best interests by taking part in the University''s mission to share and preserve the knowledge produced there. Because Harvard now has a prior, non-exclusive license to faculty journal articles in schools with open access policies, those faculty members are required to act accordingly when publishing journal articles, either by attaching an addendum to their publication agreement or obtaining a waiver. They then must deposit the publication in DASH. | scholarship, image, audio clip, video resource, manuscript, data | has parent organization: Harvard University; Cambridge; United States | nlx_158606 | SCR_004122 | 2026-08-12 10:48:55 | 0 |
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