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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
https://edspace.american.edu/openbehavior/project/signalbuddy/
Portal related to signal generation. Provided system was developed by Columbia University scientists. System includes signal generator for scientific applications which generates digital or true analog signals (sine waves, step functions, and pulse trains) and can be controlled with intuitive serial monitor interface.
Proper citation: SignalBuddy (RRID:SCR_021553) Copy
https://edspace.american.edu/openbehavior/project/craniobot/
Portal provides computer numerical controlled robot for cranial microsurgeries developed by University of Minnesota scientist. Included cranial microsurgery platform combines automated skull surface profiling with computer numerical controlled milling machine to perform variety of cranial microsurgical procedures on mice.
Proper citation: Craniobot project (RRID:SCR_021573) Copy
https://edspace.american.edu/openbehavior/project/pycontrol/
Portal provides system that combines open source hardware and software for control of behavioral experiments. Open source framework, combines Python scripts and Micropython microcontroller. Framework can be run through command line interface, or in user friendly graphical user interface that allows users to manage variety of devices such as nose pokes, LED drivers, stepper motor controllers and more. Data collected using this system can then be imported into Python for data analysis.
Proper citation: pyControl project (RRID:SCR_021574) Copy
https://edspace.american.edu/openbehavior/project/photometrybox/
Portal provides open source control system for in vivo fluorescence measurements from deep brain structures developed by University of California, San Francisco scientists. Microcontroller based solution for controlling optical components in intracranial photometry system and processing resulting signal.
Proper citation: PhotometryBox (RRID:SCR_021571) Copy
https://edspace.american.edu/openbehavior/project/hope/
Portal provides brain implant developed by MIT scientists. Implant carries 16 movable tetrodes along with two optic fibers or two injection cannulas. Designed with help of 3D CAD software, allowing modifications for various experimental needs, such as targeting different brain regions and use in other animal species (e.g., rats and non-human primates). Implant can be designed to shape of skull of individual monkeys based on pre-implantation magnetic resonance imaging, thus optimizing fit with skull surface and making recording from deep brain regions more reliable.
Proper citation: Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology project (RRID:SCR_021572) Copy
https://edspace.american.edu/openbehavior/project/cerebralux/
Portal provides low cost, open source, wireless probe for optogenetic stimulation. This wireless system for optogenetic stimulation was developed by UCLA scientists. Device consists of two parts. Optical component is mounted on head permanently, whereas electronic component is removable and is applied for each experiment. Device is controlled via custom GUI (built with the TkInter Python 2.7 library) which sends pulses to device via Arduino Uno.
Proper citation: CerebraLux (RRID:SCR_021570) Copy
https://edspace.american.edu/openbehavior/project/nose-poke-device/
Portal provides arduino based, 3D-printed nose poke device for rats. Includes set of instructions on how to build this device using arduino, some 3D printed parts and some off-the-shelf electronic components.
Proper citation: Nose Poke Device (RRID:SCR_021568) Copy
https://edspace.american.edu/openbehavior/project/syringe-pump/
Open source syringe pump apparatus developed by scientists from Michigan Technological University. Syringe pump is designed using freely available open source computer aided design (CAD) software and manufactured using open source RepRap 3-D printer and readily available parts.
Proper citation: Pearce Lab Syringe Pump project (RRID:SCR_021566) Copy
https://edspace.american.edu/openbehavior/project/operant-box-auditory-tasks-obat/
Portal provides operant box designed to train small primates in auditory tasks.Device is based on computer and Arduino Mega 2560 board, named OBAT (Operant Box for Auditory Tasks), designed to present two different auditory stimuli to small primates.All schematics and software source code are available.
Proper citation: Operant Box for Auditory Tasks project (RRID:SCR_021564) Copy
https://edspace.american.edu/openbehavior/project/robucket/
Portal for open source operant chamber, based on Arduino microcontroller platform, that can be used to train mice to respond for reward. Designed by NIDDK scientists.Apparatus contains two nose pokes, drinking well, and solenoid controlled sucrose delivery system. Chamber can run magazine training, fixed ratio and progressive ratio training schedules, and can be programmed to run more complicated behavioral paradigms.
Proper citation: Rodent Operant Bucket project (RRID:SCR_021565) Copy
https://edspace.american.edu/openbehavior/project/openfeeder/
Project related to studying reward and feeding behavior. Provides open source automatic feeding system that can be customized for food types from seeds to pellets.System integrates plexiglass tubes, Arduino Uno, motor driver, and piezo sensor to reliably deliver accurate amounts of food, and can also be built using 3D printed parts.
Proper citation: OpenFeeder (RRID:SCR_021552) Copy
Project related to auditory behavioral task data collection.Provided high throughput operant conditioning in mouse homecage system was developed by University of Maryland,College Park, scientists.Automated system for training up to hundreds of mice in auditory behavioral task features custom Matlab GUI running on desktop which connects to Raspberry Pi to administer auditory stimuli from USB soundcard and collects auditory data as well as licking data from water spout with commercially available capacitive sensors. Parts list and build instructions are readily available from paper and associated GitHub repository.
Proper citation: ToneBox (RRID:SCR_021548) Copy
https://www.beckman.com/flow-cytometry/instruments/moflo-astrios-eq
High speed flow cytometry sorter.
Proper citation: Beckman Coulter: Life Sciences MoFlo Astrios EQ Cell Sorter (RRID:SCR_018893) Copy
https://www.beckman.com/flow-cytometry/instruments/gallios
Flow Cytometer provides efficient acquisition of up to 12 parameters to achieve accurate size measurement and high resolution and processing.
Proper citation: Beckman Coulter: Gallios Flow Cytometer (RRID:SCR_019639) Copy
https://www.beckmancoulter.com/en/products/clinical-centrifugation/statspin-express-3
Primary tube centrifuge that can spin eight tubes up to 10mL and provides high quality plasma or serum in two to five minutes.
Proper citation: Beckman Coulter: StatSpin Express 3 Centrifuge (RRID:SCR_019657) Copy
https://www.beckmancoulter.com/en/products/clinical-centrifugation/statspin-express-2
Primary tube centrifuge that prepares high quality plasma or serum samples in two minutes.
Proper citation: Beckman Coulter: StatSpin Express 2 Centrifuge (RRID:SCR_019658) Copy
https://www.beckmancoulter.com/en/products/blood-banking/pk7300
Analyzer used for pre-transfusion, automated blood donor testing that features 300 sample per hour throughput, full online system status updates, data transfer capabilities, and aspiration and dispense monitoring intelligence.
Proper citation: Beckman Coulter: PK7300 Automated Microplate System (RRID:SCR_019653) Copy
https://www.beckmancoulter.com/en/products/clinical-centrifugation/statspin-cytofuge-2
Personal cytocentrifuge that provides high quality sample preparations with understandable controls and snap-seal filter concentrators.
Proper citation: Beckman Coulter: StatSpin Cytofuge 2 Cytocentrifuge (RRID:SCR_019656) Copy
Ultracentrifuge is used for centrifugation of subcellular particles, virus isolations, and high purity plasmid DNA.
Proper citation: Beckman Coulter: L-90K Ultracentrifuge (RRID:SCR_019651) Copy
https://www.beckmancoulter.com/en/products/hematology/dxh-800
DxH 800 hematology analyzer utilizes data about individual cell size, shape and structure to provide high quality results.
Proper citation: Beckman Coulter: DxH 800 Hematology Analyzer (RRID:SCR_019635) Copy
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