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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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North Carolina Diabetes Research Center Metabolomics Core Facility Resource Report Resource Website |
North Carolina Diabetes Research Center Metabolomics Core Facility (RRID:SCR_022909) | access service resource, core facility, service resource | Provides platform for quantitative targeted metabolic profiling by MS/MS and GC/MS, supported by library of stable isotope labeled standards as well as extensive scientific expertise to help researchers navigate core resources and use of services. | ABRF, USEDit, quantitative targeted metabolic profiling |
is related to: USEDit has parent organization: North Carolina Diabetes Research Center |
NIDDK P30DK124723 | SCR_022909 | North Carolina Diabetes Research Center Metabolomics Core | 2026-08-04 09:45:10 | 0 | |||||||||
|
North Carolina Diabetes Research Center Genomics and Proteomics Core Facility Resource Report Resource Website |
North Carolina Diabetes Research Center Genomics and Proteomics Core Facility (RRID:SCR_022907) | NCDRC GPC, GPC | access service resource, core facility, service resource | Provides resources and expertise in genomics and mass spectrometry at Wake Forest Center for Precision Medicine. Provides unique access to instrumentation and analytical expertise to NCDRC faculty in support of advancement of diabetes research.Overlooks the use of existing resources at NCDRC partner institutions (UNC, NC A&T, and Duke University) to coordinate work and data analysis with Metabolomics Core to provide omics analyses.Offers analytic services, expertise, and tools to integrate data to better understand interactive systems at play in disease processes. | ABRF, USEDit, genomics and mass spectrometry expertise |
is related to: USEDit has parent organization: North Carolina Diabetes Research Center |
NIDDK P30DK124723 | SCR_022907 | North Carolina Diabetes Research Center Genomics and Proteomics Core | 2026-08-04 09:45:08 | 0 | ||||||||
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University of Colorado Anschutz Medical Campus Diabetes Research Center Tissue Procurement and Processing Core Facility Resource Report Resource Website |
University of Colorado Anschutz Medical Campus Diabetes Research Center Tissue Procurement and Processing Core Facility (RRID:SCR_022904) | TPP | access service resource, core facility, service resource | Core facilitates access and usage of tissues and services to meet specialized needs of diabetes research community to expedite and catalyze innovative diabetes research at UC AMC. Provides resources to assist DRC investigators with acquisition and processing of rodent and human tissue, and specialized cell lines that are broadly required for diabetes research. | ABRF, USEDit, acquisition and processing of rodent and human tissue, specialized cell lines, diabetes |
is related to: USEDit is related to: University of Colorado Diabetes Research Center has parent organization: University of Colorado; Colorado; USA |
NIDDK P30DK116073 | SCR_022904 | University of Colorado Diabetes Research Center Tissue Procurement and Processing Core | 2026-08-04 09:45:08 | 0 | ||||||||
|
University of California at San Diego Institute for Genomic Medicine Genomics Center Core Facilitiy Resource Report Resource Website 1+ mentions |
University of California at San Diego Institute for Genomic Medicine Genomics Center Core Facilitiy (RRID:SCR_022740) | access service resource, core facility, service resource | Provides services including sequencing library preparation and sequencing on Illumina MiSeq and NovaSeq 6000 platforms. Supports single cell sequencing on 10X Genomics Chromium Controller. Provides Illumina Infinium Beadchips, which includes variety of whole genome genotyping arrays as well as Infinium MethylationEPIC BeadChip. | USEDit, ABRF, sequencing library preparation, sequencing, single cell sequencing, whole genome genotyping arrays |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: University of California at San Diego; California; USA |
NIH Office of the Director S10 OD026929; NIDDK P30DK063491; NCI P30CA023100; NIDDK P30DK120515 |
ABRF_1025 | https://coremarketplace.org/?FacilityID=1025&citation=1 | SCR_022740 | UCSD IGM Genomics Center | 2026-08-04 09:45:08 | 1 | |||||||
|
HiCDCPlus Resource Report Resource Website 1+ mentions |
HiCDCPlus (RRID:SCR_025317) | software resource, software toolkit | Software package for Hi-C/HiChIP interaction calling and differential analysis using efficient implementation of HiC-DC statistical framework. Enables principled statistical analysis of Hi-C and HiChIP data sets. Enables systematic 3D interaction calls and differential analysis for Hi-C and HiChIP | Hi-C/HiChIP interaction calling, differential analysis, statistical analysis of Hi-C and HiChIP data sets, systematic 3D interaction calls, | NHGRI U01 HG009395; NIDDK U01 DK128852 |
PMID:34099725 | Free, Available for download, Freely available | https://bitbucket.org/leslielab/hicdcplus/src/master/ | SCR_025317 | , HiC-DC+, Hi-C Direct Caller Plus, HiCDCPlus (HiC-DC+) | 2026-08-04 09:45:49 | 1 | |||||||
|
PanKbase Resource Report Resource Website 1+ mentions |
PanKbase (RRID:SCR_026593) | knowledge base, database, data or information resource | Centralized knowledge base of the human pancreas for diabetes research. Integrates diverse type 1 diabetes (T1D) datasets with expert-curated knowledge in centralized, open-source data hub. Since users will ultimately be able to contribute their own data, this will be repository for reproducible, collaborative research within the pancreas and T1D realms. | human pancreas, diabetes research, type 1 diabetes (T1D) datasets, expert-curated knowledge, pancreas, T1D | NIDDK U24 DK138515; NIDDK U24 DK138512; NIH Office of Data Science Strategies |
Free, Freely available | https://github.com/PanKbase-pipelines, https://github.com/PanKbase-DB | SCR_026593 | 2026-08-04 09:46:01 | 1 | |||||||||
|
ped-sim Resource Report Resource Website 1+ mentions |
ped-sim (RRID:SCR_026957) | simulation software, software application, software resource, source code | Software tool to simulate pedigree structures. Used for simulating relatives that can utilize either sex-specific or sex averaged genetic maps and also either model of crossover interference or traditional Poisson model for inter-crossover distances. | Pedigree simulator, simulate pedigree structures, simulating relatives, sex-specific, sex averaged, genetic maps, | NIGMS R35 GM133805; Alfred P. Sloan Research Fellowship ; United States-Israel Binational Science Foundation ; NHLBI R01 HL0113323; NHLBI P01 HL045222; NIDDK R01 DK047482; NIDDK R01 DK053889; NIGMS T32 GM007617; NIGMS T32 GM083937; Wellcome Trust |
PMID:31860654 | Free, Available for download, Freely available | SCR_026957 | Ped-sim | 2026-08-04 09:46:06 | 2 | ||||||||
|
demuxlet Resource Report Resource Website |
demuxlet (RRID:SCR_027855) | software application, software resource, source code | Software tool that harnesses natural genetic variation to determine the sample identity of each droplet containing a single cell (singlet) and detect droplets containing two cells (doublets). Genetic multiplexing of barcoded single cell RNA-seq. | Genetic multiplexing of barcoded single cell RNA-seq, harnesses natural genetic variation, | NIAMSD R01AR071522; NIAID R21AI133337; NIDDK F30DK115167; NHLBI K25HL121295; NIDCR R03DE025665 |
PMID:29227470 | Free, Available for download, Freely available | SCR_027855 | 2026-08-04 09:46:18 | 0 | |||||||||
|
trackViewer Resource Report Resource Website |
trackViewer (RRID:SCR_027743) | software resource, software toolkit | Software R package to visualize mapped reads along with annotation as track layers for NGS dataset such as ChIP-seq, RNA-seq, miRNA-seq, DNA-seq, SNPs and methylation data. | annotation as track layers for NGS dataset, ChIP-seq, DNA-seq, SNP, methylation, data, visualize mapped reads, annotation as track layers, | NIDDK R01DK076118 | PMID:31133757 | Free, Available for download, Freely available | SCR_027743 | 2026-08-04 09:46:17 | 0 |
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