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https://bils.se

A national research infrastructure that provides bioinformatics support to life science researchers in Sweden. Their work is supported by the Swedish Research Council.

Proper citation: Bioinformatics Infrastructure for Life Sciences (RRID:SCR_014723) Copy   

•   Source: SciCrunch Registry

http://www.salk.edu/science/core-facilities/peptide-synthesis/

Core facility that provides services such as peptide synthesis, incorporation of non-conventional and/or modified amino acids, HPCL characterization and purification, and Mass spec analysis.

Proper citation: Salk Institute Peptide Synthesis Core Facility (RRID:SCR_014848) Copy   

•   Source: SciCrunch Registry

http://www.salk.edu/science/core-facilities/stem-cell-core/

Core facility that provides services to support stem cell research for Salk Institute researchers and their direct collaborators. The STEM Core provides well-characterized human embryonic stem (hES) cell lines and human induced pluripotent stem (iPS) cell lines, space and equipment for research, as well as training and consultation.

Proper citation: Salk Institute Stem Cell Core Facility (RRID:SCR_014850) Copy   

•   Source: SciCrunch Registry

https://sbpdiscovery.org/research/shared-resources/flow-cytometry/

Facility that provides access to high-speed cell sorting, analytical flow cytometry, imaging flow cytometry, and validated immune profiling spectral antibody panels. Core staff provide technical expertise in experiment design, data analysis, hardware and software training, operate the facility cell sorters, and are available to assist with analysis experiments for those who prefer to have their samples run by an expert cytometrist.

Proper citation: Sanford Burnham Prebys Medical Discovery Institute Flow Cytometry Core Facility (RRID:SCR_014854) Copy   

•   Source: SciCrunch Registry

https://cbc.arizona.edu/research/support-services/facilities/nuclear-magnetic-resonance-nmr

Interdisciplinary NMR spectroscopy research facility for structural elucidation and study of conformation and dynamics of organic compounds, peptides, oligonucleotides and other small biopolymers.

Proper citation: University of Arizona Nuclear Magnetic Resonance Core Facility (RRID:SCR_012716) Copy   

•   Source: SciCrunch Registry

https://www.bcm.edu

Health sciences university located in Texas Medical Center in Houston, Texas, US. It includes medical school, Baylor College of Medicine, graduate school of Biomedical Sciences, School of Allied Health Sciences, and National School of Tropical Medicine.

Proper citation: Baylor College of Medicine; Houston; Texas (RRID:SCR_015037) Copy   

•   Source: SciCrunch Registry

https://github.com/srkesler/bnets

Software repository containing code for measuring brain networks from structural and functional MRI data. Several programs require MATLAB to run.

Proper citation: Brain Networks Toolbox (RRID:SCR_014788) Copy   

•   Source: SciCrunch Registry

https://systemsbiology.columbia.edu/genome-center

Core sells sequencing data and bioinformatic analytics services to the scientific community. Core aims to permit the development of research on sequencing protocols and encourage collaboration with clinicians to develop the next generation genomic DNA testing.

Proper citation: JP Sulzberger Columbia Genome Center (RRID:SCR_012650) Copy   

•   Source: SciCrunch Registry

https://www.lji.org/research/research-services/microscopy-histology/

Core facility dedicated to providing a static or dynamic (in vitro/in vivo) imaging services by offering histology and microscopy services and providing support and training to interested researchers. The facility offers a range of light microscopes, related imaging systems and image analysis resources for assisted or independent use (upon training). It also can provide advice on proper sample fixation, processing, embedding of tissues with attention to desired orientation, decalcification of bone tissue, cutting of paraffin blocks, cryosectioning, routine and special stains as well as training in histological techniques.

Proper citation: La Jolla Institute for Immunology Microscopy and Histology Core Facility (RRID:SCR_014835) Copy   

•   Source: SciCrunch Registry

http://www.lji.org/faculty-research/scientific-cores/functional-genomics/#overview

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 5, 2024. Core facility that combines large-scale automation and high-throughput capabilities with gene disruption techniques to pinpoint the function of individual genes and find new ways to disrupt genetic triggers of disease. The research capabilities are aimed towards finding new treatments for immune-related diseases.

Proper citation: La Jolla Institute for Allergy and Immunology Functional Genomics Core Facility (RRID:SCR_014836) Copy   

•   Source: SciCrunch Registry

http://www.salk.edu/science/core-facilities/integrative-genomics-and-bioinformatics-core/

Core facility established to assist the Salk community with integrating genomics data into their research. The primary focus of the core is to provide analysis support for next-generation sequencing applications.

Proper citation: Salk Institute Razavi Newman Integrative Genomics and Bioinformatics Core Facility (IGC) (RRID:SCR_014842) Copy   

•   Source: SciCrunch Registry

http://tools.genxpro.net/omiras/

A web server for the annotation, comparison and visualization of interaction networks of non-coding RNAs derived from small RNA-Sequencing experiments of two different conditions.

Proper citation: omiRas (RRID:SCR_010833) Copy   

•   Source: SciCrunch Registry

http://phylopythias.bifo.helmholtz-hzi.de/index.php?phase=wait

Web Server for Taxonomic Assignment of Metagenome Sequences that is a fast and accurate sequence composition-based classifier that utilizes the hierarchical relationships between clades. Taxonomic assignments with the web server can be made with a generic model, or with sample-specific models that users can specify and create. Several interactive visualization modes and multiple download formats allow quick and convenient analysis and downstream processing of taxonomic assignments.

Proper citation: PhyloPythiaS (RRID:SCR_011923) Copy   

•   Source: SciCrunch Registry

http://compbio.med.harvard.edu/CGHweb/

Data analysis service enabling users to analyse their array-CGH data with multiple algorithms simultaneously.

Proper citation: CGHweb (RRID:SCR_010923) Copy   

•   Source: SciCrunch Registry

http://agvgd.iarc.fr/index.php

A freely available, web-based program that combines the biophysical characteristics of amino acids and protein multiple sequence alignments to predict where missense substitutions in genes of interest fall in a spectrum from enriched delterious to enriched neutral.

Proper citation: Align-GVGD (RRID:SCR_010772) Copy   

•   Source: SciCrunch Registry

http://www.bio-itworld.com/

A leading source of news on technology and innovation in life sciences IT, informatics, genomics, next-gen, drug discovery, development, and clinical trials.

Proper citation: Bio-IT World (RRID:SCR_011986) Copy   

•   Source: SciCrunch Registry

http://www.mutationtaster.org/

Evaluates disease-causing potential of sequence alterations.

Proper citation: MutationTaster (RRID:SCR_010777) Copy   

•   Source: SciCrunch Registry

http://esbank.nia.nih.gov/

Not yet vetted by NIF curator

Proper citation: Mouse ES Stem Cell Bank (RRID:SCR_010660) Copy   

•   Source: SciCrunch Registry

http://hyperbrowser.uio.no/hb/

A generic web-based system, providing statistical methodology and computing power to handle a variety of biological inquires on genomic datasets.

Proper citation: Genomic HyperBrowser (RRID:SCR_010909) Copy   

•   Source: SciCrunch Registry

http://weizhong-lab.ucsd.edu/metagenomic-analysis/

A customizable web server for fast metagenomic analysis.

Proper citation: WebMGA (RRID:SCR_011951) Copy   

•   Source: SciCrunch Registry