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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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BrainWAVE Resource Report Resource Website 1+ mentions |
BrainWAVE (RRID:SCR_024396) | software resource, instrument resource, source code | Code to program and run flicker stimulation on BrainWAVE stimulator device. This brain oscillation stimulating software can be adapted across subjects and integrated into variety of experimental designs like electrophysiology, neuroimaging, EEG, MRI. Flexible method for noninvasive stimulation of brain rhythms across species. Used to measure effects of rhythmic brain activity on behavior. | OpenBehavior, Open source, noninvasive sensory flicker, deep brain stimulation, BrainWAVE stimulator device, measure effects of rhythmic brain activity, behavior | is listed by: OpenBehavior | PMID:36754625 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/brainwave/ | SCR_024396 | , Brain Wide-spectrum Audio/Visual Exposure, BrainWAVE: Noninvasive Rhythm Stimulation | 2026-08-14 09:28:47 | 6 | |||||||
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University of Texas at Austin Advanced Protein Therapeutics Core Facility Resource Report Resource Website 1+ mentions |
University of Texas at Austin Advanced Protein Therapeutics Core Facility (RRID:SCR_023740) | APT | service resource, access service resource, core facility | Core catalyzes translation of scientific discoveries into novel protein cancer therapies. Offers therapeutic antibody and enzyme discovery, engineering, and optimization services. | USEDit, ABRF, therapeutic antibody and enzyme discovery, optimization services, protein cancer therapies, |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: University of Texas at Austin; Texas; USA |
ABRF_1797 | https://coremarketplace.org/?FacilityID=1797&citation=1 | SCR_023740 | UT Austin Advanced Protein Therapeutics Core, The University of Texas at Austin UT Austin Advanced Protein Therapeutics Core | 2026-08-14 09:29:07 | 9 | |||||||
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Seattle Children's Research Institute Micro Computed Tomography Imaging and Visualization Lab Core Facility Resource Report Resource Website 1+ mentions |
Seattle Children's Research Institute Micro Computed Tomography Imaging and Visualization Lab Core Facility (RRID:SCR_024678) | service resource, access service resource, core facility | Shared instrument facility that has a Bruker Skyscan 1272 ex-vivo microCT that is capable of X-ray imaging at sub-microb resolution. The instrument can optionally be equipped with a 16-sample sample changer to automate the scanning queue. Core provides visualization and image analysis support for researchers, using open-source 3D Slicer biomedical imaging suite. | ABRF, Bruker Skyscan 1272 ex-vivo microCT, X-ray imaging, visualization and image analysis, |
is listed by: ABRF CoreMarketplace has parent organization: Seattle Childrens Research Institute; Washington; USA |
Restricted | ABRF_2541 | https://coremarketplace.org/?FacilityID=2541&citation=1 | SCR_024678 | SCRI Micro Computed Tomography Imaging and Visualization Lab | 2026-08-14 09:28:50 | 2 | |||||||
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University of Nebraska Lincoln Flow Cytometry Core Facility Resource Report Resource Website 1+ mentions |
University of Nebraska Lincoln Flow Cytometry Core Facility (RRID:SCR_024711) | service resource, access service resource, core facility | Provides flow cytometry services. Instruments include Beckman Coulter CytoFLEX SRT sorter and CytoFLEX LX, as well as NanoAnalyzer from NanoFCM. Facility staff are able to assist with everything from experimental design, instrument training, sample collection, and data analysis. | ABRF, flow cytometry services, flow cytometry, |
lists: Beckman Coulter: CytoFLEX LX Flow Cytometer lists: Beckman Coulter: CytoFLEX SRT Cell Sorter lists: Nanofcm: Flow NanoAnalyzer is listed by: ABRF CoreMarketplace has parent organization: University of Nebraska; Nebraska; USA |
Open | ABRF_2545 | https://coremarketplace.org/?FacilityID=2545&citation=1 | SCR_024711 | Flow Cytometry Core Facility | 2026-08-14 09:28:50 | 2 | |||||||
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simAIRR Resource Report Resource Website 1+ mentions |
simAIRR (RRID:SCR_023956) | standalone software, simulation software, software application, source code, software resource | Software tool for simulation of antigen experienced adaptive immune receptor repertoire datasets for benchmarking of machine learning methods. | simulation of AIRR data, shortcut learning, benchmarking of machine learning methods, adaptive immune receptor repertoires, AIRR, ML, | Free, Available for download, Freely available, | SCR_023958 | SCR_023956 | simulation of Adaptive Immune Receptor Repertoire data | 2026-08-14 09:28:43 | 1 | |||||||||
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University of Wisconsin-Madison Biochemistry Optical Core Facility Resource Report Resource Website 1+ mentions |
University of Wisconsin-Madison Biochemistry Optical Core Facility (RRID:SCR_023952) | BOC | service resource, access service resource, core facility | Core provides instrumentation for light and fluorescence based microscopy, including epifluorescence, confocal, and super-resolution imaging.Provides access to and training on basic and advanced light microscopy techniques. Expertise and advice is available for the design of experiments involving these techniques. | USEDit, ABRF, light and fluorescence microscopy, microscopy, epifluorescence imaging, confocal imaging, super-resolution imaging, |
is listed by: ABRF CoreMarketplace has parent organization: University of Wisconsin-Madison; Wisconsin; USA |
ABRF_1823 | https://coremarketplace.org/?FacilityID=1823&citation=1 | SCR_023952 | UW-Biochemistry Optical Core, University of Wisconsin Madison UW-Biochemistry Optical Core | 2026-08-14 09:29:10 | 8 | |||||||
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South Dakota State University Genomics Sequencing Core Facility Resource Report Resource Website 1+ mentions |
South Dakota State University Genomics Sequencing Core Facility (RRID:SCR_023959) | service resource, access service resource, core facility | Facility offers custom sequencing services from DNA/RNA extractions to sequencing using Illumina and Oxford Nanopore platforms. Projects examples include bulk RNAseq, 3\'RNASeq, Single Cell transcriptomics (10X Genomics), Genome sequencing, and amplicon sequencing (ie 16SRNA, genotyping). Services include experimental design and bioinformatics data analysis. | USEDit, ABRF, custom sequencing services, experimental design, bioinformatics data analysis, |
is listed by: ABRF CoreMarketplace has parent organization: South Dakota State University; South Dakota; USA |
ABRF_1825 | https://coremarketplace.org/?FacilityID=1825&citation=1 | SCR_023959 | South Dakota State University SDState-Genomics Sequencing Facility, SDState-Genomics Sequencing Facility | 2026-08-14 09:29:10 | 5 | ||||||||
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Stanford University School of Medicine Cancer Institute Biostatistics Shared Resource Core Facility Resource Report Resource Website 1+ mentions |
Stanford University School of Medicine Cancer Institute Biostatistics Shared Resource Core Facility (RRID:SCR_023696) | BSR | service resource, access service resource, core facility | Core provides statistical support to SCI members by engages them on their data related needs. Specifically, BSR members assist researchers at each stage of study’s lifecycle, including project design, mid study evaluation and interpretation and reporting of results. In addition, BSR members mentor SCI investigators in research methods. BSR assists with development and review of proposed studies and planning of research related data management systems. | ABRF, USEDit, statistical support, project design, mid study evaluation and interpretation, results reporting, |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: Stanford University; Stanford; California |
NCI | Restricted | ABRF_2509 | https://coremarketplace.org/?FacilityID=2509&citation=1, https://coremarketplace.org/RRID:SCR_023696?citation=1 | SCR_023696 | , Stanford Cancer Institute Biostatistics Shared Resource, Stanford Biostatistics Shared Resource | 2026-08-14 09:28:58 | 1 | |||||
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Montpellier Imaging Resources Core Facility Resource Report Resource Website 1+ mentions |
Montpellier Imaging Resources Core Facility (RRID:SCR_023727) | service resource, access service resource, core facility | Imaging and cytometry facility of the Montpellier area. | USEDit, ABRF | ABRF_1449 | https://coremarketplace.org/?FacilityID=1449&citation=1 | SCR_023727 | Montpellier Imaging Resources, Montpellier Ressources Imagerie | 2026-08-14 09:28:41 | 2 | |||||||||
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University of Pittsburgh Dietrich School Machine Shop Core Facility Resource Report Resource Website 1+ mentions |
University of Pittsburgh Dietrich School Machine Shop Core Facility (RRID:SCR_023720) | service resource, access service resource, core facility | Core specializes in mechanical design, fabrication, and repair of research equipment and instrumentation. | USEDit, ABRF, mechanical design, fabrication, repair, research equipment and instrumentation repair, |
is listed by: ABRF CoreMarketplace is related to: USEDit |
ABRF_1794 | https://coremarketplace.org/?FacilityID=1794&citation=1 | SCR_023720 | University of Pittsburgh Dietrich School Machine Shop Core Facility | 2026-08-14 09:28:58 | 1 | ||||||||
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Mayo Clinic Medical Genome Core Facility Resource Report Resource Website 1+ mentions |
Mayo Clinic Medical Genome Core Facility (RRID:SCR_024632) | service resource, access service resource, core facility | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 23,2026. Medical Genome Facility includes Cytogenetics Core, Genome Analysis Core and Proteomics Core. Available services include Sanger DNA sequencing, genotyping, gene expression and cytogenetic analysis, biospecimens accessioning and processing, tissue and cell molecular analysis, RNA interference, and oligonucleotide synthesis. Provides Illumina HiSeq2000 platforms and Pacific Biosciences RS single molecule real-time sequencer.Offers applied research services for development of innovative, personalized tests and treatments, especially with regard to biomarkers. | ABRF, Cytogenetics, Genome Analysis, Proteomics, Sanger DNA sequencing, genotyping, gene expression and cytogenetic analysis, biospecimens accessioning and processing, tissue and cell molecular analysis, RNA interference, oligonucleotide synthesis, |
is listed by: ABRF CoreMarketplace has parent organization: Mayo Clinic |
THIS RESOURCE IS NO LONGER IN SERVICE | ABRF_465 | https://coremarketplace.org/?FacilityID=465&citation=1 | SCR_024632 | Mayo Clinic Medical Genome Facility, Medical Genome Facility | 2026-08-14 09:28:49 | 1 | |||||||
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University of Freiburg Medical Center Lighthouse Core Facility Resource Report Resource Website 1+ mentions |
University of Freiburg Medical Center Lighthouse Core Facility (RRID:SCR_023785) | LCF | service resource, access service resource, core facility | Core specializes in areas of flow cytometry and cell sorting; light microscopy including confocal, widefield fluorescence, high content screening, lightsheet, slide scanning, highly multiplexed microscopy; and digital PCR / QPCR. It is located at University of Freiburg Medical Center and hosts institutions including Dept. of Medicine I, Center for Chronic Immunodeficiency (CCI), CCCF / DKTK, and Medical Faculty of University of Freiburg. | USEDit, ABRF, flow cytometry, cell sorting, light microscopy, confocal, widefield, fluorescence, high content screening, lightsheet, slide scanning, highly multiplexed microscopy, digital PCR / QPCR, |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: University of Freiburg; Baden-Wurttemberg; Germany |
Restricted | ABRF_1806 | https://coremarketplace.org/?FacilityID=1806&citation=1 | SCR_023785 | UF-Lighthouse Core Facility, University of Freiburg UF-Lighthouse Core Facility | 2026-08-14 09:29:08 | 1 | ||||||
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State University of Campinas Institute of Chemistry Microscopy Core Facility Resource Report Resource Website 10+ mentions |
State University of Campinas Institute of Chemistry Microscopy Core Facility (RRID:SCR_024633) | service resource, access service resource, core facility | Core offers services in advancing scientific research in the field of chemistry. Provides Scanning Electron Microscopy (SEM), Atomic Force Microscopy (AFM), Confocal Laser Scanning Microscopy (CLSM), and Optical Microscopy. Offers sample preparation techniques, including ultramicrotome, ultracryomicrotome, and sputter coating,training and technical support. | ABRF, Scanning Electron Microscopy (SEM), Atomic Force Microscopy, Confocal Laser Scanning Microscopy, Optical Microscopy, ultramicrotome, ultracryomicrotome, sputter coating, |
is listed by: ABRF CoreMarketplace has parent organization: State University of Campinas; São Paulo; Brazil |
Open | ABRF_2534 | https://coremarketplace.org/?FacilityID=2534&citation=1 | SCR_024633 | , UNICAMP Institute of Chemistry Microscopy Core Facility, UNICAMP - Institute of Chemistry - Microscopy Core Facility | 2026-08-14 09:29:20 | 14 | |||||||
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StatFin database Resource Report Resource Website 1+ mentions |
StatFin database (RRID:SCR_024843) | database, data or information resource | Finland's statistical database contains collection of statistical tables on Finnish society and population of Finland including economy, housing, transport, tourism, consumption, prices, wages and salaries, energy, enterprises and other topics. | statistical database, Finnish society data, population of Finland, | Free, Freely available | SCR_024843 | StatFin | 2026-08-14 09:29:24 | 2 | ||||||||||
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National Prostate Cancer Register of Sweden Resource Report Resource Website 1+ mentions |
National Prostate Cancer Register of Sweden (RRID:SCR_024844) | NPCR of Sweden | database, data or information resource | National Prostate Cancer Register of Sweden database. | database | SCR_024844 | National Prostate Cancer Register (NPCR) of Sweden | 2026-08-14 09:29:06 | 1 | ||||||||||
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Beth Israel Deaconess Medical Center Precision RNA Medicine Delivery Unit Core Facility Resource Report Resource Website 1+ mentions |
Beth Israel Deaconess Medical Center Precision RNA Medicine Delivery Unit Core Facility (RRID:SCR_024862) | service resource, access service resource, core facility | Delivery Unit offers training and services on the NanoAssemblr Spark, NanoAssemblr Ignite+, and Malvern Zetasizer for the purpose of synthesis and characterisation of Lipid Nanoparticles (LNPs). The Zetasizer is able to read zeta potential and size of particles, including exosomes, liposomes, and LNPs. | ABRF |
is listed by: ABRF CoreMarketplace has parent organization: Harvard Medical School; Massachusetts; USA |
ABRF_2603 | https://coremarketplace.org/?FacilityID=2603&citation=1 | SCR_024862 | Beth Israel Deaconess Medical Center Precision RNA Medicine Core - Delivery Unit, Precision RNA Medicine Core - Delivery Unit | 2026-08-14 09:29:24 | 1 | ||||||||
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MCFLIRT Resource Report Resource Website 1+ mentions |
MCFLIRT (RRID:SCR_024792) | software application, software resource | Software intra-modal motion correction tool designed for use on fMRI time series for linear (affine) inter- and inter-modal brain image registration. | registration for brain images, medical image analysis, motion correction, | is a plug in for: FSL | Free, Freely available | SCR_024792 | Motion Correction FMRIB's Linear Image Registration Tool, , MC FMRIB's Linear Image Registration Tool | 2026-08-14 09:29:23 | 4 | |||||||||
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University of Nevada Reno School of Medicine High Spatial and Temporal Resolution Imaging Core Facility Resource Report Resource Website 1+ mentions |
University of Nevada Reno School of Medicine High Spatial and Temporal Resolution Imaging Core Facility (RRID:SCR_024793) | HSTRI Core | service resource, access service resource, core facility | Core provides high spatial and temporal resolution imaging methodologies and instrumentation for studying cellular structure, signaling pathways, and function in health and disease. Offers education, training and expertise in advising investigators in the use of the new technologies. | ABRF, Image acquisition and analysis, high spatial and temporal resolution imaging, |
is listed by: ABRF CoreMarketplace has parent organization: University of Nevada at Reno; Nevada; USA |
NIGMS P20GM130459 | Open | ABRF_2596 | https://coremarketplace.org/?FacilityID=2596&citation=1 | SCR_024793 | , University of Nevada High Spatial and Temporal Resolution Imaging Core | 2026-08-14 09:29:06 | 2 | |||||
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University of Wisconsin Madison Biotechnology Center Animal Models Core Facility Resource Report Resource Website 1+ mentions |
University of Wisconsin Madison Biotechnology Center Animal Models Core Facility (RRID:SCR_024797) | service resource, access service resource, core facility | Core provides support for generation of novel animals including mice, rats and swine models using CRISPR or transgenic technology, cryopreservation, rederivation, and IVF recovery of rodent animal models. | ABRF, generation of novel animals, mice models, rats models, swine models, CRISPR, transgenic technology, cryopreservation, rederivation, IVF recovery, |
is listed by: ABRF CoreMarketplace has parent organization: University of Wisconsin-Madison; Wisconsin; USA |
Open | ABRF_2588 | https://coremarketplace.org/?FacilityID=2588&citation=1 | SCR_024797 | , UW Biotechnology Center-Animal Models Core, University of Wisconsin Madison Biotechnology Center Animal Models Core | 2026-08-14 09:28:51 | 8 | |||||||
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spatiAlign Resource Report Resource Website 1+ mentions |
spatiAlign (RRID:SCR_024828) | data processing software, software application, data analysis software, software resource | Software tool as unsupervised contrastive learning model that employs expression of all measured genes and spatial location of cells, to integrate multiple tissue sections. Enables joint downstream analysis of multiple datasets in low-dimensional embeddings and also in reconstructed full expression space. Used for integrative analysis of time-series brain sections, including spatial clustering, differential expression analysis, and particularly trajectory inference that requires corrected gene expression matrix. | integrative analysis, time-series brain sections, multiple datasets, spatial clustering, differential expression analysis, trajectory inference, | DOI:10.1101/2023.08.08.552402 | Free, Available for download, Freely available | SCR_024828 | 2026-08-14 09:29:06 | 1 |
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