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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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Optimouse Resource Report Resource Website 1+ mentions |
Optimouse (RRID:SCR_021527) | data processing software, software application, data analysis software, software resource | Software tool for analysis of mouse position data.Open source software to analyze positions of individual mice, specifically their nose positions, in behavioral arena with the goal of minimizing error. | Mouse position data analysis, mouse position, position data, nose position, OpenBehavior |
is listed by: OpenBehavior is related to: Optimouse project |
DOI:10.1186/s12915-017-0377-3 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/optimouse/ | SCR_021527 | 2026-08-14 09:28:36 | 2 | ||||||||
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DIY-NAMIC project Resource Report Resource Website |
DIY-NAMIC project (RRID:SCR_021489) | project portal, data or information resource, portal, instrument resource | Project is related to measurement of complex phenotypes in homecage. Homecage automated open source behavioral testing sytem to enable high throughput 24h testing of many standard operant paradigms. Using Arduino platform and easily sourced inexpensive components system can display light cues and dispense liquid rewards and has nosepoke receptacles with infrared detectors for operant responses, within homecage.Method provided by Dartmouth College scientists. | Behavioral testing system, homecage, Arduino platform, dispense liquid rewards, nosepoke receptacles, infrared detectors, OpenBehavior, Instrument |
is listed by: OpenBehavior has parent organization: Dartmouth College; New Hampshire; USA |
DOI:10.1523/eneuro.0160-20.2020 | Free, Freely available | SCR_021489 | DIY-NAMIC | 2026-08-14 09:28:26 | 0 | ||||||||
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Mousetrap Resource Report Resource Website 1+ mentions |
Mousetrap (RRID:SCR_021523) | data processing software, software application, data analysis software, software resource, data acquisition software | Integrated, open source mouse tracking software package.Software plugin to record and analyze mouse movements in computerized lab experiments.Software plugin provides two items that implement mouse tracking in OpenSesame. | Record mouse movements, analyze mouse movements, mouse tracking, OpenBehavior | is related to: Mousetrap project | DOI:10.3758/s13428-017-0900-z | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/mousetrap/ | SCR_021523 | 2026-08-14 09:28:35 | 2 | ||||||||
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CapTouch project Resource Report Resource Website |
CapTouch project (RRID:SCR_021488) | project portal, data or information resource, portal, instrument resource | Project related to study learning and memory in preclinical research.Included tracking system for object recognition tasks provides standardization across experiments and labs.Automates scoring process using capacitive sensors, while providing validated 3D-printed objects in order to standardize object recognition to study learning and memory in preclinical research.Used for accurate measurement of interaction time during object recognition tasks. | Tracking system, object recognition tasks, standardization across experiments, automated scoring process, capacitive sensors, standardize object recognition, study learning and memory, accurate measurement, interaction time, OpenBehavior., Instrument | is listed by: OpenBehavior | DOI:10.1523/eneuro.0310-20.2020 | Free, Freely available | SCR_021488 | CapTouch | 2026-08-14 09:28:35 | 0 | ||||||||
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PANC-DB Resource Report Resource Website 1+ mentions |
PANC-DB (RRID:SCR_021860) | data or information resource, portal, database, topical portal | Portal to make all Human Pancreas Analysis Program data available to anyone in research community and to interact with and connect scientific community. Stores clinical, molecular, cellular, immunology, imaging, and pathology data from pancreatic tissue and cell samples from organ donors with and without type 1 or type 2 diabetes. | HIRN, HPAP, Human Pancreas Analysis Program, |
is listed by: NIDDK Information Network (dkNET) is related to: Human Islet Research Network (HIRN) |
Free, Freely available | SCR_021860 | 2026-08-14 09:28:40 | 1 | ||||||||||
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Sustainable Grazing System Pasture Model Resource Report Resource Website |
Sustainable Grazing System Pasture Model (RRID:SCR_021854) | software application, simulation software, software resource | Software tool as biophysical simulation model for livestock systems. It has flexible interface for setting up and running simulations with extensive graphical and data output. | simulation model, livestock systems | Free, Available for download, Freely available | SCR_021854 | SGS Pasture Model | 2026-08-14 09:28:33 | 0 | ||||||||||
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Million Veteran Program Resource Report Resource Website 100+ mentions |
Million Veteran Program (RRID:SCR_021731) | MVP | data or information resource, portal, topical portal | National research program to learn how genes, lifestyle, and military exposures affect health and illness. | Genomic dataset, genes, lifestyle, military exposures, affect health, affect illness | Free, Freely available | SCR_021731 | 2026-08-14 09:28:31 | 273 | ||||||||||
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FuzzyWuzzy Resource Report Resource Website 1+ mentions |
FuzzyWuzzy (RRID:SCR_021699) | software toolkit, software application, data analytics software, software resource | Software pacakge that uses Levenshtein Distance to calculate differences between sequences for string matching. | Levenshtein Distance, calculate differences between sequences, string matching | Free, Freely available | SCR_021699 | 2026-08-14 09:28:23 | 5 | |||||||||||
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MouseMove Resource Report Resource Website |
MouseMove (RRID:SCR_021618) | data processing software, software application, data analysis software, software resource | Open source program for semi automated analysis of movement and cognitive testing in rodents. Accurately quantifies numerous parameters of movement including travel distance, speed, turning, stationary fraction and laterality. Part of MouseMove system. | Semi automated analysis, movement analysis, movement parameters quantification, OpenBehavior |
is listed by: OpenBehavior is related to: MouseMove project |
DOI:10.1038/srep16171 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/mousemove/ | SCR_021618 | 2026-08-14 09:28:37 | 0 | ||||||||
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TRIO Platform Resource Report Resource Website |
TRIO Platform (RRID:SCR_021596) | project portal, data or information resource, portal, instrument resource | Portal provides low profile in vivo imaging support and restraint system for mice. System is compact and provides sturdy head fixation, gas anesthesia mask, and warm water bed. Compact design allows to work with variety of microscope stages and use of 3D printed components makes this design customizable. | Instrument, mice neural function, imaging support, restraint system, fixation, gas anesthesia mask, warm water bed, OpenBehavior | is listed by: OpenBehavior | DOI:10.3389/fnins.2016.00169 | Free, Freely available | SCR_021596 | Three-In-One Platform | 2026-08-14 09:28:37 | 0 | ||||||||
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Visual Discrimination with an iPad Resource Report Resource Website |
Visual Discrimination with an iPad (RRID:SCR_021593) | project portal, data or information resource, portal, instrument resource | Portal provides touchscreen platform developed by Texas Christian University scientists. iPad apparatus set up consists of four wall operant chamber, remote desktop program, Visual Basic 6 software, and single wireless iPad. Wireless iPad allows for flexibility in setups during performing visual discrimination behavioral experiments. | Instrument, iPad apparatus, four wall operant chamber, remote desktop program, Visual Basic 6 software, wireless iPad, visual discrimination tasks, OpenBehavior |
is listed by: OpenBehavior has parent organization: Texas Christian University; Fort Worth; USA |
DOI:10.1016/j.beproc.2012.11.013 | Free, Freely available | http://www.drkennethleising.com/research/tbes/ | SCR_021593 | 2026-08-14 09:28:37 | 0 | ||||||||
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StimDuino Resource Report Resource Website |
StimDuino (RRID:SCR_021594) | project portal, data or information resource, portal, instrument resource | Portal provides Arduino controlled stimulus isolator that allows for highly accurate, reproducible automated setting of stimulation currents. Automatic stimulation patterns are software controlled and parameters are set from Matlab coded simple, intuitive and user friendly graphical user interface. | Instrument, Arduino controlled stimulus isolator, reproducible automated setting, stimulation currents, OpenBehavior | DOI:10.1016/j.jneumeth.2015.01.016 | Free, Freely available | SCR_021594 | 2026-08-14 09:28:29 | 0 | ||||||||||
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SimulaBeta Resource Report Resource Website 1+ mentions |
SimulaBeta (RRID:SCR_021900) | software application, simulation software, software resource | Software tool as simulation program for insulin glucose feedback control. Based on nonlinear MiMe-NoCoDI model. | Open source, insulin, glucose, simulation, modelling, model, beta cell, homeostasis |
uses: CyberUnits is related to: SPINA Carb is related to: SimThyr has parent organization: Ruhr University Bochum; North Rhine-Westphalia; Germany has parent organization: Ulm University; Baden-Wurttemberg; Germany |
Deutsche Forschungsgemeinschaft (DFG) GRK 1041; Open Access Publication Funds of the Ruhr-Universität Bochum ; Germany ; Ministry of Education (MOE) Singapore |
PMID:36271244 | Free, Available for download, Freely available | DOI:10.5281/zenodo.4922800 | https://doi.org/10.5281/zenodo.4922800 | SCR_021900 | 2026-08-14 09:28:26 | 2 | ||||||
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Sample Size Shop Resource Report Resource Website 1+ mentions |
Sample Size Shop (RRID:SCR_021747) | data or information resource, portal, topical portal | Platform for multilevel and longitudinal data.Provide researchers such as behavioral and social scientists with tools and education related to study design including Calculating power and sample size for any univariate or multivariate test for general linear multivariate model, assuming fixed predictors;Producing confidence intervals on power estimates for designs with fixed predictors;Producing power calculations for designs with single Gaussian covariate;Supporting designs with unequal group sizes, and complicated covariance structures;Creating basic power curves. | multilevel data, longitudinal data, calculating power and sample size, producing confidence intervals on power estimates, producing power calculations, creating basic power curves | Free, Freely available | SCR_021747 | 2026-08-14 09:28:24 | 4 | |||||||||||
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ANGSD Resource Report Resource Website 10+ mentions |
ANGSD (RRID:SCR_021865) | data processing software, software application, data analysis software, software resource | Software tool fo analysis of next generation sequencing data. Calculates various summary statistics, and performs association mapping and population genetic analyses utilizing full information in next generation sequencing data by working directly on raw sequencing data or by using genotype likelihoods. | analysing NGS data, next generation sequencing data analysis, raw sequencing data, genotype likelihoods | DOI:10.1186/s12859-014-0356-4 | Free, Available for download, Freely available | http://www.popgen.dk/angsd/index.php/ANGSD | SCR_021865 | Analysis of Next Generation Sequencing Data | 2026-08-14 09:28:26 | 47 | ||||||||
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Arthropoda Assembly Assessment Catalog Resource Report Resource Website 1+ mentions |
Arthropoda Assembly Assessment Catalog (RRID:SCR_021864) | a3cat, A3Cat | data or information resource, catalog, database | Database of metadata and assembly quality metrics for all Arthropod assemblies on NCBI. | Metadata and assembly quality metrics, Arthropod assemblies, NCBI | DOI:10.1101/2021.10.15.464561 | Free, Available for download, Freely available | https://gitlab.com/evogenlab/a3cat-workflow | SCR_021864 | Arthropoda Assembly Assessment Catalogue | 2026-08-14 09:28:33 | 2 | |||||||
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CNVpytor Resource Report Resource Website 10+ mentions |
CNVpytor (RRID:SCR_021627) | data processing software, software application, data analysis software, software resource, sequence analysis software | Software Python package and command line tool for CNV/CNA analysis from depth of coverage by mapped reads. Software tool for CNV/CNA detection and analysis from read depth and allele imbalance in whole genome sequencing. | Copy number variations, copy number alternations, whole genome sequencing, Python | has parent organization: Mayo Clinic | NCI U24 CA220242 | DOI:10.1101/2021.01.27.428472 | Free, Available for download, Freely available | SCR_021627 | 2026-08-14 09:28:29 | 24 | ||||||||
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Motif Mutation Analysis for Regulatory Genomic Elements Resource Report Resource Website 500+ mentions |
Motif Mutation Analysis for Regulatory Genomic Elements (RRID:SCR_021902) | MMARGE | software toolkit, data processing software, software application, data analysis software, software resource | Software package that integrates genome wide genetic variation with epigenetic data to identify collaborative transcription factor pairs. Optimized to work with chromatin accessibility assays such as ATAC-seq or DNase I hypersensitivity, as well as transcription factor binding data collected by ChIP-seq. Used to identify combinations of cell type specific transcription factors while simultaneously interpreting functional effects of non-coding genetic variation. | genome wide genetic variation, epigenetic data, identify collaborative transcription factor pairs, interpreting functional effects, non-coding genetic variation | NCI CA173903; NIGMS GM085764; NIDDK DK091183; NHLBI R00 123485 |
PMID:29893919 | Free, Available for download, Freely available | SCR_021902 | 2026-08-14 09:28:40 | 608 | ||||||||
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Trialdesign Resource Report Resource Website 10+ mentions |
Trialdesign (RRID:SCR_021749) | data or information resource, portal, topical portal | Integrated platform for designing clinical trials. | Clinical trial, education, training, study design, innovative adaptive clinical trial designs | Free, Freely available | SCR_021749 | Trialdesign.org | 2026-08-14 09:28:38 | 17 | ||||||||||
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Rcorrector Resource Report Resource Website 10+ mentions |
Rcorrector (RRID:SCR_022011) | data processing software, software application, data analysis software, software resource | Software tool as kmer based error correction method for RNAseq data. Can also be applied to other types of sequencing data where read coverage is nonuniform, such as single cell sequencing. Used for error correction for Illumina RNAseq reads. | RNA-seq, k-mer, random sequencing errors correction, kmer based error correction, RNA-seq data, sequencing data, nonuniform read coverage, Illumina RNAseq reads error correction | NSF ABI1159078; NSF ABI1356078 |
DOI:10.1186/s13742-015-0089-y | Free, Available for download, Freely available | SCR_022011 | RNA-seq error CORRECTOR | 2026-08-14 09:28:27 | 39 |
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