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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
University of Pittsburgh Dietrich School Materials Characterization Laboratory Core Facility
 
Resource Report
Resource Website
10+ mentions
University of Pittsburgh Dietrich School Materials Characterization Laboratory Core Facility (RRID:SCR_025127) MCL service resource, access service resource, core facility Facility maintains large array of instrumentation for production and analysis of complex materials, including nanoparticles, thin films, polymers, ceramics, and molecular electronics.Oversees operations of Department Biological Instrumentation Cluster which provides access to specialized equipment used in molecular biology and biological chemistry. ABRF, production and analysis of complex materials, nanoparticles, thin films, polymers, ceramics, molecular electronics, is listed by: ABRF CoreMarketplace
has parent organization: University of Pittsburgh; Pennsylvania; USA
ABRF_2672 https://coremarketplace.org/?FacilityID=2672&citation=1 SCR_025127 University of Pittsburgh Dietrich School Materials Characterization Laboratory 2026-08-14 09:28:56 11
University of Pittsburgh School of Medicine Cell Imaging Core Facility
 
Resource Report
Resource Website
1+ mentions
University of Pittsburgh School of Medicine Cell Imaging Core Facility (RRID:SCR_025132) service resource, access service resource, core facility Core for image based analysis, laser capture microdissection, and live cell fluorescence imaging. Provides range of consultation and laboratory services performed by core staff. Users training is available.Cell and Tissue imaging on confocal microscopes including Zeiss LSM 710, Leical Sp8 and Leica Stellaris. ABRF, laser capture microdissection, live cell fluorescence imaging, image analysis, is listed by: ABRF CoreMarketplace
has parent organization: University of Pittsburgh; Pennsylvania; USA
ABRF_2677 https://coremarketplace.org/?FacilityID=2677&citation=1 SCR_025132 University of Pittsburgh Cell Imaging Core, Cell Imaging Core 2026-08-14 09:29:30 2
University of Florida Herbert Wertheim College of Engineering Research Service Centers Core Facility
 
Resource Report
Resource Website
1+ mentions
University of Florida Herbert Wertheim College of Engineering Research Service Centers Core Facility (RRID:SCR_025135) service resource, access service resource, core facility Core provides access to characterization and process instrumentation. Expert staff provides assistance and guidance. Services include electron microscopy and analysis (SEM, TEM, FIB, EBSD, WDS), microelectronic device fabrication (7000 sq ft cleanroom, Class 100-1000), X-ray computed tomography (CT), particle system characterization (size, zeta potential, surface area, porosity, rheology), X-ray diffraction, surface analysis (AFM, profilometry, XPS, Auger), spectroscopy (UV/Vis with integrating sphere, FTIR/NIR with micro capability and micro-Raman). ABRF, characterization, process, instrumentation, microelectronic device fabrication, particle system characterization, electron microscopy and analysis, X-ray computed tomography, is listed by: ABRF CoreMarketplace
has parent organization: University of Florida; Florida; USA
Open ABRF_2685 https://coremarketplace.org/?FacilityID=2685&citation=1 SCR_025135 , University of Florida Herbert Wertheim College of Engineering Research Service Centers, Herbert Wertheim College of Engineering Research Service Centers 2026-08-14 09:29:30 4
University of Pittsburgh School of Medicine Gnotobiotic Animal Core Facility
 
Resource Report
Resource Website
1+ mentions
University of Pittsburgh School of Medicine Gnotobiotic Animal Core Facility (RRID:SCR_025220) service resource, access service resource, core facility Gnotobiotic Animal Core Laboratory is a BSL2-compliant mouse facility providing isolators for studies requiring a controlled microbiotic environment. All husbandry and upkeep services are provided. Additional specialized support is also available. ABRF, controlled microbiotic environment services, is listed by: ABRF CoreMarketplace
has parent organization: University of Pittsburgh; Pennsylvania; USA
ABRF_2708 https://coremarketplace.org/?FacilityID=2708&citation=1 SCR_025220 Gnotobiotic Animal Core Laboratory 2026-08-14 09:28:58 1
nltk
 
Resource Report
Resource Website
1+ mentions
nltk (RRID:SCR_025101) software toolkit, source code, software resource Software suite of open source Python modules, data sets, and tutorials supporting research and development in Natural Language Processing. Platform for building Python programs to work with human language data. Provides interfaces to corpora and lexical resources such as WordNet, along with suite of text processing libraries for classification, tokenization, stemming, tagging, parsing, and semantic reasoning, wrappers for industrial strength NLP libraries, and active discussion forum. Natural Language Processing, building Python programs platform, human language data, interfaces to corpora and lexical resources, text processing libraries, Free, Available for download, Freely available SCR_025101 NLTK, Natural Language Toolkit 2026-08-14 09:28:55 2
University of Pittsburgh Health Sciences Mass Spectrometry Core Facility
 
Resource Report
Resource Website
10+ mentions
University of Pittsburgh Health Sciences Mass Spectrometry Core Facility (RRID:SCR_025222) service resource, access service resource, core facility Health Sciences Mass Spectrometry Core provides liquid chromatography high resolution mass spectrometry (LC-HRMS) services for metabolomics, lipidomics and proteomics. Expert staff provide assistance throughout the full lifespan of all projects from experimental design and sample preparation through statistical analysis and interpretation of datasets. ABRF, liquid chromatography high resolution mass spectrometry services, metabolomics, lipidomics, proteomics is listed by: ABRF CoreMarketplace
has parent organization: University of Pittsburgh; Pennsylvania; USA
ABRF_2710 https://coremarketplace.org/?FacilityID=2710&citation=1 SCR_025222 Health Sciences Mass Spectrometry Core 2026-08-14 09:29:11 11
University of Pittsburgh School of Medicine Flow Cytometry Core Facility
 
Resource Report
Resource Website
1+ mentions
University of Pittsburgh School of Medicine Flow Cytometry Core Facility (RRID:SCR_025223) service resource, access service resource, core facility Flow Cytometry Core at John G. Rangos Sr. Research Center is a BSL2+ compliant cytometry analysis and sorting facility located at the John G. Rangos Sr. Research Center in Lawrenceville serving investigators from across the University of Pittsburgh. ABRF, Flow Cytometry, is listed by: ABRF CoreMarketplace
has parent organization: University of Pittsburgh; Pennsylvania; USA
ABRF_2705 https://coremarketplace.org/?FacilityID=2705&citation=1 SCR_025223 Flow Cytometry Core at John G. Rangos Sr. Research Center 2026-08-14 09:28:58 1
JACUSA2
 
Resource Report
Resource Website
1+ mentions
JACUSA2 (RRID:SCR_025104) data processing software, software application, data analysis software, software resource Software tool to detect single nucleotide variants by comparing data from next-generation sequencing experiments. Variant caller to detect single nucleotide variant positions from comparing RNA-DNA and/or RNA-RNA sequencing samples. JACUSA2 is one-stop solution to detect single nucleotide variants and reverse transcriptase induced arrest events in Next-generation sequencing data. accurate Variant assessment, detect single nucleotide variants, comparing data, next-generation sequencing experiments, RNA-DNA, RNA-RNA, sequencing samples comparison, Max Planck Society PMID:28049429 Free, Available for download, Freely available https://github.com/dieterich-lab/JACUSA SCR_025104 JACUSA 2026-08-14 09:28:55 5
Microsoft SEAL
 
Resource Report
Resource Website
10+ mentions
Microsoft SEAL (RRID:SCR_025184) SEAL software toolkit, software resource, source code, software library Software homomorphic encryption library. C++ FHE library implementing BFV and CKKS schemes. Allows computations to be performed directly on encrypted data. This enables software engineers to build end-to-end encrypted data storage and computation services where the customer never needs to share their key with the service. C++ FHE library, homomorphic encryption, encrypted data, is used by: TenSEAL
is used by: AWS HE toolkit
is related to: EVA
is related to: tf-encrypted
works with: SEAL-python
Free, Available for download, Freely available SCR_025184 2026-08-14 09:29:31 10
University of Pittsburgh Cryo-electron Microscopy Core Facility
 
Resource Report
Resource Website
10+ mentions
University of Pittsburgh Cryo-electron Microscopy Core Facility (RRID:SCR_025216) service resource, access service resource, core facility Facility provides access to cutting edge instrumentation for high resolution structural analysis of proteins, protein complexes, viruses, macromolecular assemblies, cellular organelles, and bacterial cells., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. ABRF, structural analysis, proteins, protein complexes, viruses, macromolecular assemblies, cellular organelles, bacterial cells, is listed by: ABRF CoreMarketplace
has parent organization: University of Pittsburgh; Pennsylvania; USA
THIS RESOURCE IS NO LONGER IN SERVICE ABRF_2701 https://coremarketplace.org/?FacilityID=2701&citation=1 SCR_025216 , University of Pittsburgh Cryo-electron Microscopy Facility, Cryo-electron Microscopy Facility 2026-08-14 09:29:11 15
University of Pittsburgh Peptide and Peptoid Synthesis Core Facility
 
Resource Report
Resource Website
1+ mentions
University of Pittsburgh Peptide and Peptoid Synthesis Core Facility (RRID:SCR_025219) service resource, access service resource, core facility Core offers services for custom synthesis and characterization of peptides, peptoids and small molecule constructs. The facility has extensive capabilities for technologically advanced custom modifications such as bioconjugations and targeted therapeutic strategies. State of the art HPLC and mass spectrometry capabilities as well as services in support of protein, siRNA, antibody and small molecule quantification and characterization are available ABRF, custom synthesis and characterization, peptides, peptoids, small molecule, constructs is listed by: ABRF CoreMarketplace
has parent organization: University of Pittsburgh; Pennsylvania; USA
ABRF_2706 https://coremarketplace.org/?FacilityID=2706&citation=1 SCR_025219 Peptide and Peptoid Synthesis Core 2026-08-14 09:29:11 2
University of Pittsburgh Single Cell Core Facility
 
Resource Report
Resource Website
1+ mentions
University of Pittsburgh Single Cell Core Facility (RRID:SCR_025110) service resource, access service resource, core facility Core offers single cell sequencing. Provides analysis of transcriptomics, proteomics and epigenomics at single cell level. Provides comprehensive approach for cell characterization and gene expression profiling. Services include single cell gene expression, immune profiling, ATAC, and multiome analysis. ABRF, single cell sequencing, analysis, transcriptomics, proteomics, epigenomics is listed by: ABRF CoreMarketplace
has parent organization: University of Pittsburgh; Pennsylvania; USA
ABRF_2669 https://coremarketplace.org/?FacilityID=2669&citation=1 SCR_025110 University of Pittsburgh Single Cell Core 2026-08-14 09:29:29 6
TenSEAL
 
Resource Report
Resource Website
1+ mentions
TenSEAL (RRID:SCR_025198) software toolkit, software resource, source code, software library Software library for doing homomorphic encryption operations on tensors built on Microsoft SEAL, with Python API. homomorphic encryption operations, operations on tensors, HE operations on tensors, built on Microsoft SEAL, Python API, uses: Microsoft SEAL Free, Available for download, Freely available SCR_025198 2026-08-14 09:29:11 3
GALA
 
Resource Report
Resource Website
1+ mentions
GALA (RRID:SCR_025194) GALA data processing software, software application, data analysis software, software resource Software tool for protein function prediction. Extracts information from both protein sequences and structures, facilitating unified learning of protein structural representations. GALA incorporates domain discriminator conditioned on both representations and predicted probabilities, which undergoes adversarial training to ensure representation invariance across diverse environments. protein function prediction, protein sequences and structures, DOI:10.1093/gigascience/giae093 SCR_025194 Graph Adversarial Learning with Alignment 2026-08-14 09:29:31 1
Natural Products Atlas
 
Resource Report
Resource Website
10+ mentions
Natural Products Atlas (RRID:SCR_025107) NP Atlas data or information resource, knowledge base, atlas Open access knowledge base for microbial natural products discovery. Database of microbially derived natural product structures. Provides coverage of bacterial and fungal natural products to visualize chemical diversity. Includes compounds and contains referenced data for structure, compound names, source organisms, isolation references, total syntheses, and instances of structural reassignment. Interactive web portal permits searching by structure, substructure, and physical properties. Provides mechanisms for visualizing natural products chemical space and dashboards for displaying author and discovery timeline data. Atlas has been developed under FAIR principles. FAIR principles, microbial natural products discovery, natural product structures, bacterial and fungal natural products, visualize chemical diversity, has parent organization: Simon Fraser University; British Columbia; Canada NSERC Discovery ;
NCCIH U41 AT008718;
NIGMS R01 GM125943;
NCCIH F31 AT010098;
NCI F31 CA236237;
NCCIH T32 AT007533;
NIH D43 TW010530;
NSF ;
BBSRC ;
Carnegie Trust for the Universities of Scotland ;
Netherlands eScience Center ;
Sao Paulo Research Foundation ;
NCCIH AT008718;
NIGMS GM124461;
Natural Sciences and Engineering Research Council of Canada ;
Ministry of Science ;
Technology and Telecommunications of Costa Rica
PMID:31807684
DOI:10.1093/nar/gkab941
Free, Freely available, SCR_025107 , The Natural Products Atlas, The Natural Products Atlas 2.0 2026-08-14 09:29:29 36
Centers for Disease Control and Prevention NHIS Data, Questionnaires and Related Documentation
 
Resource Report
Resource Website
10+ mentions
Centers for Disease Control and Prevention NHIS Data, Questionnaires and Related Documentation (RRID:SCR_025162) data or information resource, portal, organization portal Collection of National Health Interview Survey (NHIS) data, questionnaires and related documents to monitor health of the United States population through collection and analysis of data on broad range of health topics. National Health Interview Survey, NHIS data and related documents, monitor health of the United States population, has parent organization: Centers for Disease Control and Prevention Free, Freely available SCR_025162 , Questionnaires and Related Documentation, CDC NHIS Data, NHIS Data 2026-08-14 09:28:56 36
Creighton University Histology Core Facility
 
Resource Report
Resource Website
1+ mentions
Creighton University Histology Core Facility (RRID:SCR_025163) service resource, access service resource, core facility Facility provides equipment and services for studies utilizing animal and human tissues. Services include Sample, Processing, Embedding, Sectioning, Histochemistry, Immunohistochemistry, Imaging, Microscopy. Equipment includes microtomes for paraffin sections, cryostat for frozen sections, vibratome for plastic sections, and Nikon Eclipse Ci-L microscope for brightfield and fluorescence applications. ABRF, animal and human tissues processing, embedding, sectioning, histochemistry, immunohistochemistry, imaging, is listed by: ABRF CoreMarketplace
has parent organization: Creighton University; Nebraska; USA
ABRF_2696 https://coremarketplace.org/?FacilityID=2696&citation=1 SCR_025163 CU Histology Core Lab, Creighton University Histology Core Lab 2026-08-14 09:29:30 2
University of Pittsburgh Magnetic Resonance Research Center Core Facility
 
Resource Report
Resource Website
10+ mentions
University of Pittsburgh Magnetic Resonance Research Center Core Facility (RRID:SCR_025215) service resource, access service resource, core facility Core is dedicated to development and application of magnetic resonance imaging and magnetic resonance spectroscopy for medical and biological research. MRRC is whole-body imaging capable with specialty in anatomical MRI imaging of brain, spine, extremities, liver, bladder as well as functional MRI to study cognitive, sensory, and motor function in the brain. ABRF, magnetic resonance imaging, magnetic resonance spectroscopy, is listed by: ABRF CoreMarketplace
has parent organization: University of Pittsburgh; Pennsylvania; USA
ABRF_2702 https://coremarketplace.org/?FacilityID=2702&citation=1 SCR_025215 , University of Pittsburgh Magnetic Resonance Research Center, Magnetic Resonance Research Center 2026-08-14 09:29:32 12
FINAL
 
Resource Report
Resource Website
1+ mentions
FINAL (RRID:SCR_025171) software toolkit, software resource, source code, software library Software C++ FHE library as fully homomorphic encryption scheme based on NTRU and LWE. fully homomorphic encryption, FHE, homomorphic, homomorphic encryption scheme, NTRU, LWE, Free, Available for download, Freely available SCR_025171 Faster FHE instantiated with NTRU and LWE 2026-08-14 09:29:10 1
Lunenfeld-Tanenbaum Research Institute Network Biology Collaborative Centre Flow Cytometry Core Facility
 
Resource Report
Resource Website
1+ mentions
Lunenfeld-Tanenbaum Research Institute Network Biology Collaborative Centre Flow Cytometry Core Facility (RRID:SCR_025384) service resource, access service resource, core facility Core provides flow cytometry analyzers and cell sorters, with specialty in image-based flow cytometry and cell sorting.Services include unassisted and full-service cell sorting, training on theory and on instruments, consultation on experiment design, protocol development, data analysis, manuscript preparation and grant submission. Applications include image-based analysis powered by machine learning on the Amnis ImageStream; image-based cell sorting using the BD BACS Discover S8; cell sorting for a variety of applications including multi-color sort for bulk culture, indexed cell sort into 96-well plates, cell cycle phase sort and primary tissue sorting for RNA or DNA analysis. ABRF, cell sorting, flow cytometry, is listed by: ABRF CoreMarketplace
has parent organization: Lunenfeld-Tanenbaum Research Institute
ABRF_2807 https://coremarketplace.org/?FacilityID=2807&citation=1 SCR_025384 , Lunenfeld-Tanenbaum Research Institute Network Biology Collaborative Centre Flow Cytometry, Network Biology Collaborative Centre Flow Cytometry 2026-08-14 09:29:36 1

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