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http://purl.bioontology.org/ontology/MCBCC
Ontology covering a comprehensive list of cell lines derived from breast tissue, both normal and pathological. The ontology in built in OWL with cross relation to classes- genetic variation, pathological condition, genes, chemicals and drugs. The relations built enable semantic query across different classes
Proper citation: Breast Tissue Cell Lines Ontology (RRID:SCR_006686) Copy
http://purl.bioontology.org/ontology/WB-BT
A structured controlled vocabulary of the anatomy of Caenorhabditis elegans.
Proper citation: C. elegans Gross Anatomy Vocabulary (RRID:SCR_006835) Copy
http://purl.bioontology.org/ontology/IDOBRU
A biomedical ontology in the domain of zoonotic disease brucellosis that is caused by Brucella, a facultative intracellular baterium.
Proper citation: Brucellosis Ontology (RRID:SCR_006795) Copy
http://purl.bioontology.org/ontology/DOID
Comprehensive hierarchical controlled vocabulary for human disease representation.Open source ontology for integration of biomedical data associated with human disease. Disease Ontology database represents comprehensive knowledge base of inherited, developmental and acquired human diseases.
Proper citation: Human Disease Ontology (RRID:SCR_000476) Copy
http://purl.bioontology.org/ontology/GAZ
THIS RESOURCE IS NO LONGER IN SERVICE, documented on April 23, 2014. Description not available.
Proper citation: Gazetteer (RRID:SCR_000473) Copy
http://purl.bioontology.org/ontology/PHYLONT
Ontology for Phylogenetic Analysis
Proper citation: Phylogenetic Ontology (RRID:SCR_000912) Copy
http://purl.bioontology.org/ontology/BHO
An application ontology devoted to the standardized recording of phenotypic data related to hemorrhagic disorders.
Proper citation: Bleeding History Phenotype Ontology (RRID:SCR_001165) Copy
http://purl.bioontology.org/ontology/ATO
A taxonomy of Amphibia
Proper citation: Amphibian Taxonomy Ontology (RRID:SCR_000906) Copy
http://purl.bioontology.org/ontology/PATHLEX
A comprehensive lexicon - a unified language of anatomic pathology terms - for standardized indexing and retrieval of anatomic pathology information resources.
Proper citation: Anatomic Pathology Lexicon (RRID:SCR_000907) Copy
http://purl.bioontology.org/ontology/HIV
Ontology that encompasses all knowledge about HIV
Proper citation: HIV ontology (RRID:SCR_000908) Copy
http://purl.bioontology.org/ontology/ICD11-BODYSYSTEM
Ontology of a set of body-system terms used in the ICD (International Classification of Diseases) 11 revision
Proper citation: Body System Terms from ICD11 (RRID:SCR_001252) Copy
https://wiki.phenoscape.org/wiki/Teleost_Anatomy_Ontology
A multi-species anatomy ontology for teleost fishes. It was originally seeded from ZFA, but covers terms relevant to other taxa. The TAO uses terms from the Common Anatomy Reference Ontology (CARO) as a template for its upper level nodes, and the Vertebrate Skeletal Anatomy Ontology (VSAO) for general skeletal anatomy classes. Growth of the TAO is enabled by contributions from data curators and the ichthyological community. The TAO can be browsed by using the NCBO BioPortal and data annotated using TAO terms can be queried using the Phenoscape Knowedgebase.
Proper citation: Teleost Anatomy Ontology (RRID:SCR_001610) Copy
Community standard for pathway data sharing. Standard language that aims to enable integration, exchange, visualization and analysis of biological pathway data. Supports data exchange between pathway data groups and thus reduces complexity of interchange between data formats by providing accepted standard format for pathway data. Open and collaborative effort by community of researchers, software developers, and institutions. BioPAX is defined in OWL DL and is represented in RDF/XML format.Uses W3C standard Web Ontology Language, OWL.
Proper citation: Biological Pathways Exchange (RRID:SCR_001681) Copy
http://purl.bioontology.org/ontology/BOF
An ontology of biodiversity of INPA
Proper citation: Biodiversity Ontology (RRID:SCR_010204) Copy
http://purl.bioontology.org/ontology/GEXO
An application ontology for the domain of gene expression. The ontology integrates fragments of GO and MI with data from GOA, IntAct, UniProt, NCBI, KEGG and orthology relations.
Proper citation: Gene Expression Ontology (RRID:SCR_010326) Copy
http://purl.bioontology.org/ontology/GFO
A top-level ontology integrating objects and processes.
Proper citation: General Formal Ontology (RRID:SCR_010328) Copy
http://purl.bioontology.org/ontology/GFO-BIO
A biological core ontology built on the General Formal Ontology.
Proper citation: General Formal Ontology for Biology (RRID:SCR_010329) Copy
http://purl.bioontology.org/ontology/COGAT
Ontology that characterizes the state of current thought in cognitive science. It defines a set of mental concepts along with a set of mental tasks, and the measurement relations between those classes.
Proper citation: Cognitive Atlas Ontology (RRID:SCR_010295) Copy
http://purl.bioontology.org/ontology/CTCAE
A coding system for reporting adverse events that occur in the course of cancer therapy. It was derived from the Common Toxicity Criteria (CTC) v2.0 and is maintained by the Cancer Therapy Evaluation Program (CTEP) at the National Cancer Institution (NCI).
Proper citation: Common Terminology Criteria for Adverse Events (RRID:SCR_010296) Copy
http://sourceforge.net/apps/mediawiki/cdao/
A formalization of concepts and relations relevant to evolutionary comparative analysis, such as phylogenetic trees, OTUs (operational taxonomic units) and compared characters (including molecular characters as well as other types). CDAO is being developed by scientists in biology, evolution, and computer science
Proper citation: Comparative Data Analysis Ontology (RRID:SCR_010297) Copy
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