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https://mass-spec.stanford.edu/instruments
Scion GC triple quad is applied to targeted trace level analysis of metabolites and other small molecules. Electron ionization combines with MS/MS capability for outstanding selectivity. Samples are often derivatized for compatibility with GC/MS.
Proper citation: Bruker: Scion TQ GC/MS mass spectrometer (RRID:SCR_018698) Copy
https://mass-spec.stanford.edu/instruments
Bruker micrOTOF-Q II is benchtop Q-Tof mass spectrometer, applied to applications such as small molecule accurate mass determination, intact protein analysis including antibodies, peptide mapping, and other custom projects. This system is operated with Agilent 1260 UPLC and includes inline diode array detector and ESI source.
Proper citation: Bruker: micrOTOF-Q II LC/MS system (RRID:SCR_018697) Copy
https://mass-spec.stanford.edu/instruments
Microflex LRF mass spectrometer is specialized for protein, peptide, and polymer analysis. This MALDI-TOF instrument can be operated in linear mode for high mass accuracy characterization, or in reflector mode to achieve enhanced resolution.
Proper citation: Bruker: Microflex MALDI TOF mass spectrometer (RRID:SCR_018696) Copy
Luminometer combines instrumentation and software for uses includinh bioluminescent assays, protocols and support. You can measure flash or glow-type luminescence, have two fluorescent modules available, and it accommodates 1.5ml microcentrifuge tubes and 35mm petri dishes, with optional 12mm × 50mm test tube adapter. Measure light output from liquid and solid samples; no minimum volume requirements. The GloMax 20/20 blends user-friendly operation and a small footprint.This Instrument Was Retired September 1, 2023. Accessories and service available until September 1, 2028.
Proper citation: Promega: GloMax 20/20 Luminometer (RRID:SCR_018613) Copy
https://www.olympus-lifescience.com/en/microscopes/macro/mvx10/
Microscope employs single zoom optical path with large diameter, which is optimized to collect light with efficiency and resolution at all magnifications. From fluorescent observation of whole organisms, such as zebrafish, at low magnification to detailed observation of gene expression at cellular level at high magnification, features pupil division mechanism in light path to mimic effect of stereo microscope.
Proper citation: Olympus: MVX10 Macroview Stereo Fluorescence Microscope (RRID:SCR_018612) Copy
https://mass-spec.stanford.edu/instruments
LTQ-Orbitrap Elite mass spectrometer with Waters nanoAcquity system. Used for proteomic applications.
Proper citation: Thermo Fisher: LTQ-Orbitrap Elite nano LC/MS system (RRID:SCR_018694) Copy
https://www.qiagen.com/us/spotlight-pages/ias/qiacube-classic-resource-page/
Purification system that performs fully automated purification of nucleic acids and proteins in molecular biology applications.
Proper citation: Qiagen: QIAcube Classic (RRID:SCR_018618) Copy
https://www.perkinelmer.com/product/zephyr-ngs-workstation-133750
Benchtop liquid handler designed to automate construction of 48 to 96 next generation sequencing libraries per day.
Proper citation: Perkin Elmer: Zephy G3 NGS liquid handler (RRID:SCR_018616) Copy
PCR Setup Robot. Compact benchtop instrument for setup of PCR experiments with setup and automatic calculation of all mixes, eliminating the need to program pipetting steps.
Proper citation: Qiagen: QIAgility (RRID:SCR_018622) Copy
https://www.perkinelmer.com/product/ivis-instrument-spectrum-120v-andor-c-124262
In vivo imaging system that combines two dimensional and three dimensional optical tomography in one platform.The system uses leading optical technology for preclinical imaging research and development best for non-invasive longitudinal monitoring of disease progression, cell trafficking and gene expression patterns in living animals.
Proper citation: Perkin Elmer: IVIS Spectrum In Vivo Imaging System (RRID:SCR_018621) Copy
Sequencer that uses pyrosequencing technology for real time, sequence based detection, quantification of sequence variants, and epigenetic methylation. Used for analysis of CpG methylation, SNPs, insertion deletions, STRs, variable gene copy number, and for microbial identification and resistance typing.
Proper citation: Qiagen: Pyromark Q24 Sequencer (RRID:SCR_018620) Copy
System includes: LightCycler 480 instrument which is real-time PCR device, allowing the use of additional thermal block cycler units (96-well and 384-well format) with the system; LightCycler 480 Software which provides intuitive, easy-to-navigate user interface for real-time PCR programming, data capture, and data analysis to study gene expression and genetic variation. LightCycler 480 II represents newer generation of the same real-time PCR system, with improved features like enhanced optics for more uniform plate analysis across all wells, potentially leading to increased accuracy and consistency in data collection compared to original LightCycler 480.
Proper citation: Roche: LightCycler 480 Real Time PCR System (RRID:SCR_018626) Copy
Genetic analyzer that automates electrophoresis analysis of your DNA and RNA samples.
Proper citation: Qiagen: QIAxcel Genetic Analyzer (RRID:SCR_018624) Copy
RNA and DNA purification analyzer that disrupts biological samples through high speed shaking in plastic tubes with stainless steel, tungsten carbide, or glass beads.Can analyze up to 48 or 192 samples at the same time.
Proper citation: Qiagen: Tissue Lyser II (RRID:SCR_018623) Copy
https://mass-spec.stanford.edu/instruments
Micromass (now Waters) Quattro Premier triple quadrupole operates with Agilent 1100 HPLC and specializes in quantitative work and selective of targeted analytes including metabolites and other small molecules, and peptides from complex matrices such as serum, tissue, cell culture, and other biological sources.
Proper citation: Waters: Quattro Premier LC/MS system (RRID:SCR_018705) Copy
https://mass-spec.stanford.edu/instruments
Triple quad mass spectrometer for quantitative work and selective assays of targeted analytes. Can analyze metabolites, peptides from matrices such as serum, tissue, cell culture, and other biological sources.
Proper citation: Thermo Fisher: Vantage LC/MS mass spectrometer (RRID:SCR_018704) Copy
Confocal microscope covers broad range of requirements in confocal and multiphoton imaging with array of scan speeds at highest resolution., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.
Proper citation: Leica: TCS SP5 II microscope (RRID:SCR_018714) Copy
https://www.thermofisher.com/order/catalog/product/A28567#/A28567
System designed for users who need easy-to-use real-time PCR system. QuantStudio 3 Real Time PCR System supports 96-well (0.2ml or 0.1ml) or 384-well (QS5 only) consumables. Can detect extremely small changes in gene expression, as little as 1.5-fold. Its dynamic range of up to 10 logs allows for tracking wide range of expression changes across various sample types and conditions. When connected to Thermo Fisher Cloud, QuantStudio 3 system provides access to your data wherever and whenever you want.
Proper citation: Thermo Fisher: QuantStudio 3 Real Time PCR System (RRID:SCR_018712) Copy
Inverted fluorescence tissue culture microscope capable of imaging specimens in brightfield, darkfield, phase contrast, Hoffman modulation contrast, fluorescence, and differential interference contrast modes.TIRFM-IX illuminator is this microscope accessory which attaches to the rear lamphouse port and contains FC connector for external laser source and port for mercury or xenon lamp housing.
Proper citation: Olympus: IX70 Inverted Fluorescence Microscope (RRID:SCR_018604) Copy
http://tools.thermofisher.com/content/sfs/brochures/PS-64079-MS-TSQ-Quantiva-PS64079-EN.pdf
Triple stage quadrupole mass spectrometer for low level quantitation and has mass range of mass per charge 10 to 1800 mass per charge. Laboratory room temperature must be maintained between 18 to 27 C and cannot change by more than 5 C.
Proper citation: Thermo Fisher: TSQ Quantiva Triple-Stage Quadrupole Mass Spectrometer (RRID:SCR_018650) Copy
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