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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Emory University Pediatric Biomarkers Core Facility Resource Report Resource Website 1+ mentions |
Emory University Pediatric Biomarkers Core Facility (RRID:SCR_025574) | service resource, access service resource, core facility | Biomarkers Core offers high quality analysis of biological samples to support pediatric research. Provides equipment and technical expertise to assay samples using methods that combine the features of gas-liquid chromatography and mass spectrometry. | ABRF, analysis of biological samples, pediatric research, gas-liquid chromatography, mass spectrometry, |
is listed by: ABRF CoreMarketplace has parent organization: Emory University; Georgia; USA |
ABRF_2867 | https://coremarketplace.org/?FacilityID=2867&citation=1 | SCR_025574 | , Emory University Emory Pediatric Biomarkers Core, Emory Pediatric Biomarkers Core | 2026-08-14 09:29:03 | 1 | ||||||||
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Peter MacCallum Cancer Centre Molecular Genomics Core Facility Resource Report Resource Website 1+ mentions |
Peter MacCallum Cancer Centre Molecular Genomics Core Facility (RRID:SCR_025695) | MGC | service resource, access service resource, core facility | Core works with researchers, clinicians and other research technology platforms to establish the best possible approach for any genomics experiment. Offers expertise on variety of off-the-shelf sequencing products and implementation or customisation of new protocols to meet demands of cancer research. | genomics experiment, sequencing products, cancer research, |
is listed by: ABRF CoreMarketplace has parent organization: Peter MacCallum Cancer Institute |
Peter Mac Foundation ; Austalian Cancer Research Foundation |
ABRF_2917 | https://coremarketplace.org/?FacilityID=2917&citation=1 | SCR_025695 | Molecular Genomics Core, Molecular Genomics Core facility | 2026-08-14 09:29:43 | 8 | ||||||
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ISOLDE Resource Report Resource Website 10+ mentions |
ISOLDE (RRID:SCR_025577) | software application, software resource | Software environment to ease task of building macromolecular models into low to medium resolution experimental maps. Physically realistic environment for model building into low-resolution electron-density maps. Can generate maps directly from crystallographic F/sigF data in MTZ format and automatically re-calculate them when model changes, and/or generate "static" maps from pre-calculated F/phi data. | software environment, model building, building macromolecular models, low resolution electron density maps, experimental maps, | is a plug in for: UCSF ChimeraX | Wellcome Trust | PMID:29872003 | Free, Freely available | SCR_025577 | 2026-08-14 09:29:16 | 13 | ||||||||
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stMMR Resource Report Resource Website 1+ mentions |
stMMR (RRID:SCR_025601) | software application, software resource, source code | Software tool for spatial domain identification from spatially resolved transcriptomics with multi-modal feature representation. | spatial domain identification, spatially resolved transcriptomics, multi-modal feature representation, | National Natural Science Foundation of China ; Natural Science Foundation of Shandong Province |
DOI:10.1101/2024.02.22.581503 | Free, Available for download, Freely available, | SCR_025601 | 2026-08-14 09:29:16 | 1 | |||||||||
|
Beth Israel Deaconess Medical Center Genomics Proteomics Core Facility Resource Report Resource Website 1+ mentions |
Beth Israel Deaconess Medical Center Genomics Proteomics Core Facility (RRID:SCR_025689) | service resource, access service resource, core facility | Core provides high throughput transcriptional profiling, genotyping, protein quantitation, protein profiling and identification, real-time PCR and robotics. Genomics core offers Affymetrix gene chip technologies, both cartridge based and 96 well high throughput, analysis of genomic information with as little as 50ng of RNA, RNA extracted from paraffin based samples, or partially degraded RNA. Proteomics services include design, performance and analysis of proteomic studies. | BIDMC, proteomics, genomics, |
is listed by: ABRF CoreMarketplace has parent organization: Harvard Medical School; Massachusetts; USA |
ABRF_2901 | https://coremarketplace.org/BIDMCGPBSC, https://coremarketplace.org/?FacilityID=2901&citation=1 | SCR_025689 | BIDMC Genomics Proteomics Core (Proteomics), BIDMC Genomics Proteomics Core | 2026-08-14 09:29:06 | 1 | ||||||||
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Automated Systematic Search Deduplicator Resource Report Resource Website 1+ mentions |
Automated Systematic Search Deduplicator (RRID:SCR_025607) | ASySD | software application, software resource | Open source, interoperable software tool to remove duplicate citations in biomedical systematic reviews. | automated deduplication, systematic searches, biomedical reviews, | has parent organization: University of Edinburgh; Scotland; United Kingdom | European Union’s Horizon 2020 ; Alzheimer Research UK Pilot Grant ; Stroke Association |
PMID:37674179 | Free, Freely available | SCR_025607 | Automated Systematic Search Deduplicator:ASySD | 2026-08-14 09:29:41 | 2 | ||||||
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University of Maine Microscopy and Image Analysis Core Facility Resource Report Resource Website 1+ mentions |
University of Maine Microscopy and Image Analysis Core Facility (RRID:SCR_025784) | MIAC | service resource, access service resource, core facility | Core offers imaging for diverse applications, including multi-color experiments, live sample imaging, protein colocalization, large sample tiling, and Z-stack 3D/4D imaging, as well as weak label detection. Provides expert guidance in microscopy and image analysis, training and support to advance research across various model organisms. | imaging, multi-color experiments, live sample imaging, protein colocalization, large sample tiling, Z-stack 3D/4D imaging, label detection, |
is listed by: ABRF CoreMarketplace has parent organization: University of Maine; Orono; United States |
ABRF_2930 | https://coremarketplace.org/?FacilityID=2930&citation=1 | SCR_025784 | , University of Maine Microscopy and Image Analysis Core, Microscopy and Image Analysis Core at University of Maine | 2026-08-14 09:29:07 | 2 | |||||||
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NCI Division of Cancer Control and Population Sciences SEER-Medicare Comorbidity SAS Macros Resource Report Resource Website 1+ mentions |
NCI Division of Cancer Control and Population Sciences SEER-Medicare Comorbidity SAS Macros (RRID:SCR_025810) | data or information resource, topical portal, disease-related portal, portal | Portal provides SAS Macros to calculate comorbidity weights. Used to assist SEER-Medicare investigators with their analyses. NCI recommends use of the 2021 macro. The 2014 and 2000 versions are provided for those needing to reproduce prior results. These macros offer the option of including Medicare hospital (MedPAR) claims only, or also considering physician (NCH) and outpatient claims. The Rule-Out option is recommended in the latter situation. Note that diagnoses using ICD-10 codes, starting in October 2015, are not included in the 2000 and 2014 macros. NCI does not accept responsibility for the completeness or accuracy of the codes and weights used in the macros. Investigators may modify the macros if they wish to include different diagnosis codes or condition weights. | SAS Macros, calculate comorbidity weights, diagnosis codes, condition weights, |
is related to: Surveillance Epidemiology and End Results has parent organization: National Cancer Institute |
Free, Freely available | SCR_025810 | SEER-Medicare Comorbidity SAS Macros | 2026-08-14 09:29:19 | 4 | |||||||||
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Invicro Vivoquant Resource Report Resource Website 1+ mentions |
Invicro Vivoquant (RRID:SCR_025778) | software application, software resource | Software multi-modality post-processing suite for SPECT, CT, PET, MR, Optical and and Autoradiography imaging data. | preclincial imaging, imaging data processing, | Restricted | SCR_025778 | Vivoquant | 2026-08-14 09:29:19 | 6 | ||||||||||
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MRQy Resource Report Resource Website 1+ mentions |
MRQy (RRID:SCR_025779) | data processing software, software application, data analysis software, software resource | Software quality assurance and checking tool for quantitative assessment of magnetic resonance imaging and computed tomography data. Used for quality control of MR imaging data. | quantitative assessment, magnetic resonance imaging, computed tomography, imaging data, | NCI U24CA199374; NCI R01CA202752; NCI R01CA208236; NCI R01CA216579; NCI R01CA220581; NCI 1U01CA239055; NCI 1F31CA216935; NCI 1U01CA248226; NHLBI R01HL15127701A1; NIBIB 1R43EB028736; NCRR 1C06RR12463 |
PMID:33176026 | Free, Available for download, Freely available | SCR_025779 | 2026-08-14 09:29:07 | 1 | |||||||||
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Alex's Lemonade Stand Foundation for Childhood Cancer Childhood Cancer Repository Resource Report Resource Website 1+ mentions |
Alex's Lemonade Stand Foundation for Childhood Cancer Childhood Cancer Repository (RRID:SCR_025812) | topical portal, biomaterial supply resource, portal, data or information resource, cell repository, disease-related portal, material resource | Repository stores tissue samples and uses them to create cell lines. The cell lines and xenografts can be used as model to understand cancers and to test new treatments. Researchers all over the world can request cell lines and models to use in their research. | Childhood cancer, tissue samples, create cell lines, xenografts, | Childhood Cancer | Cancer Prevention & Research Institute of Texas ; Alexs Lemonade Stand Foundation |
https://www.alexslemonade.org/childhood-cancer/for-families/repository | SCR_025812 | Childhood Cancer Repository | 2026-08-14 09:29:44 | 9 | ||||||||
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University of Copenhagen Novo Nordisk Foundation Center for Basic Metabolic Research Metabolomics Platform Core Facility Resource Report Resource Website 1+ mentions |
University of Copenhagen Novo Nordisk Foundation Center for Basic Metabolic Research Metabolomics Platform Core Facility (RRID:SCR_025795) | service resource, access service resource, core facility | Provides standardized mass spectrometry-based services for detection of metabolites in various biological samples. Offers development of novel techniques, access to advanced analytical instrumentation, guidance with experimental design, support with post-acquisition data analyses and assistance with publications and planning future studies. | standardized mass spectrometry-based services, detection of metabolites, biological samples, acquisition data analyses, |
lists: Novo Nordisk: Metabolomics Platform Bruker timsTOF Pro 2 mass spectrometer coupled with Agilent 1290 Bio UPLC- Timon is listed by: ABRF CoreMarketplace has parent organization: University of Copenhagen; Copenhagen; Denmark |
Open | ABRF_2931 | https://coremarketplace.org/?FacilityID=2931&citation=1 | SCR_025795 | , Metabolomics Platform, Novo Nordisk Foundation Center for Basic Metabolic Research Metabolomics Platform, Metabolomics Platform Core Facility | 2026-08-14 09:29:07 | 1 | |||||||
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University of Michigan Unit for Laboratory Animal Medicine Core Facility Resource Report Resource Website 1+ mentions |
University of Michigan Unit for Laboratory Animal Medicine Core Facility (RRID:SCR_025790) | ULAM | service resource, access service resource, core facility | Core partners with University of Michigan research community to achieve animal welfare standards in pursuit of impactful science. Provides training laboratory animal veterinarians and veterinary care to all animals used at the University of Michigan. | training laboratory animal veterinarians, veterinary care, | has parent organization: University of Michigan; Ann Arbor; USA | Restricted | SCR_025790 | Unit for Laboratory Animal Medicine, University of Michigan Unit for Laboratory Animal Medicine | 2026-08-14 09:29:44 | 2 | ||||||||
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University of Michigan School of Medicine Advanced Genomics Core Facility Resource Report Resource Website 1+ mentions |
University of Michigan School of Medicine Advanced Genomics Core Facility (RRID:SCR_025788) | service resource, access service resource, core facility | Provides next generation services. Provides centralized expertise in advanced methods that enables all researchers to effectively exploit them for making scientific discoveries. | next generation services, | has parent organization: University of Michigan Medical School; Michigan; USA | SCR_025788 | University of Michigan Advanced Genomics Core Research Facility, University of Michigan School of Medicine Advanced Genomics Core Research Facility, Advanced Genomics Core | 2026-08-14 09:29:19 | 7 | ||||||||||
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Chinese Genome Sequence Archive Resource Report Resource Website 1000+ mentions |
Chinese Genome Sequence Archive (RRID:SCR_025826) | GSE | database, data or information resource | Public archive of raw sequence data in National Genomics Data Center as part of the China National Center for Bioinformation. GSA accepts worldwide data submissions, performs data curation and quality control for all submitted data. Provides data storage and sharing services. | Chinese National Genomics Data Center, raw sequence data, data storage and sharing, | National Key R and D Program of China ; Strategic Priority Research Program of Chinese Academy of Sciences ; Genomics Data Center Construction of Chinese Academy of Sciences ; National Natural Science Foundation of China ; International Partnership Program of the Chinese Academy of Sciences |
PMID:34400360 | r3d100012342 | https://doi.org/10.17616/R3094D | SCR_025826 | Genome Sequence Archive Family, , Genome Sequence Archive | 2026-08-14 09:29:19 | 1805 | ||||||
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Africa Microscopy Initiative Imaging Centre Core Facility Resource Report Resource Website 1+ mentions |
Africa Microscopy Initiative Imaging Centre Core Facility (RRID:SCR_025881) | service resource, access service resource, core facility | AMI Imaging Center houses advanced, commercial light microscopes. These instruments are tailored for use in the life sciences and provide high spatial and temporal resolution to study variety of biology. | AMI Imaging Center, advanced, commercial, light microscopes, Africa, imaging, |
is listed by: ABRF CoreMarketplace is related to: University of Cape Town; Western Cape; South Africa |
PMID:37803173 | Open | ABRF_2957 | https://coremarketplace.org/?FacilityID=2957&citation=1 | SCR_025881 | AMI Imaging Center, Africa Microscopy Initiative Imaging Centre | 2026-08-14 09:29:08 | 1 | ||||||
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Dorado Resource Report Resource Website 100+ mentions |
Dorado (RRID:SCR_025883) | software application, software resource, source code | Software tool as Oxford Nanopore basecaller. Used to determine nucleotide sequence. | Oxford Nanopore, basecaller, determine nucleotide sequence, | Free, Available for download, Freely available | SCR_025883 | 2026-08-14 09:29:20 | 370 | |||||||||||
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University of Michigan Rogel Cancer Center Immune Monitoring Core Facility Resource Report Resource Website 1+ mentions |
University of Michigan Rogel Cancer Center Immune Monitoring Core Facility (RRID:SCR_025765) | service resource, access service resource, core facility | Provides immunologic and biological support for ongoing research projects and clinical trials. Services include measuring multiple cytokines in single assay, determining cytokine concentrations in various biological specimens and monitoring immune cell activation through investigative analytic procedures. Offers sample processing expertise for blood and tissue samples, including both plasma or serum and peripheral bloodmononuclear cells. | measuring multiple cytokines, research projects and clinical trials, determining cytokine concentrations, monitoring immune cell activation, sample processing, | Restricted | SCR_025765 | University of Michigan Rogel Cancer Center Immune Monitoring Core, University of Michigan Rogel Cancer Center Immune Monitoring Shared Resource | 2026-08-14 09:29:44 | 1 | ||||||||||
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Scupa Resource Report Resource Website 1+ mentions |
Scupa (RRID:SCR_025755) | Scupa | data processing software, software application, data analysis software, source code, software resource | Software R package for immune cell polarization assessment of scRNA-seq data. Single-cell unified polarization assessment of immune cells using single-cell foundation model. Used for comprehensive immune cell polarization analysis. | immune cell polarization analysis, immune cell polarization assessment, scRNA-seq data, | Cancer Prevention and Research Institute of Texas ; NLM R01LM012806; NIA U01AG079847; NIA R01CA276513 |
PMID:39229048 | Free, Available for download, Freely available | SCR_025755 | Single-Cell Unified Polarization Assessment | 2026-08-14 09:29:19 | 2 | |||||||
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CoCoPyE Resource Report Resource Website 1+ mentions |
CoCoPyE (RRID:SCR_025756) | source code, software application, simulation software, software resource | Software tool for quality assessment of microbial genomes. Used to predict completeness and contamination of bacterial and archaeal genomes. Provides taxonomic classification of the input. Feature-based learning and prediction of genome quality indices. | Feature-based learning and prediction, genome quality indices, genome quality indices prediction, quality assessment, microbial genomes | DOI:10.1101/2024.02.07.579156 | Free, Available for download, Freely available | SCR_025756 | 2026-08-14 09:29:07 | 1 |
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