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https://www.augusta.edu/mcg/cba/emhisto/

Core offers variety of specimen preparation services for transmission and scanning electron microscopy, vibratome, paraffin, cryostat and JB-4 sectioning.Offers routine staining and various histological special stains, PASH, Masson Trichrome, Van Gieson and many others, immunohistochemical services including immuno-EM studies. Core staff performs all aspects of the ultrastructural procedures from specimen processing to imaging (for Electron Microscopy, TEM and SEM) and processing, sectioning, and staining for light microscopy (paraffin, cryostat, and JB-4).

Proper citation: Augusta University Medical College of Georgia Electron Microscopy and Histology Core Facility (RRID:SCR_026810) Copy   

•   Source: SciCrunch Registry

https://primate.wisc.edu/homepage/our-services/animal-services/pathology-services/

Pathology Services Core is essential to nonhuman primate colony health and research at the WNPRC. PSU team consists of pathologists with ACVP and/or ACLAM board certification, research program manager, and research specialists. Unit works with clinical veterinary staff to provide rapid diagnosis and effective monitoring and interpretation of acute and chronic conditions affecting colony animals as well as subjects assigned to research studies. Core offers services including clinical pathology testing; cytology evaluation; surgical biopsy evaluation; gross post mortem examination, specialized sample collections; and histology with unbiased interpretation of lesions in reference to spontaneous disease, experimental questions, and research goals. PSU is responsible for collection, banking, and distribution of NHP samples through both Nonhuman Primate Biological Materials Distribution core and National Institute on Aging Nonhuman Primate Tissue Bank.

Proper citation: Wisconsin National Primate Research Center Pathology Services Core Facility (RRID:SCR_026782) Copy   

•   Source: SciCrunch Registry

https://www.waisman.wisc.edu/idd-models/

Models Core in Waisman Center provides resources including mouse models of human conditions, along with behavioral testing capabilities to characterize these models and test new therapies; stem cell technologies to support creation of induced pluripotent stem cell lines for IDD conditions as well as specialized genome editing services; microscopy technology and expertise for characterization of both stem cell and mouse models of IDD conditions.

Proper citation: University of Wisconsin-Madison Intellectual and Developmental Disabilities Models Core Facility (RRID:SCR_026781) Copy   

•   Source: SciCrunch Registry

https://medresearch.umich.edu/labs-departments/labs/microbiome-core

Core provides microbial sequencing, high-throughput nucleic acid extraction, microbial cultivation, and strain identification.

Proper citation: University of Michigan Medical School Microbiome Core Facility (RRID:SCR_026820) Copy   

•   Source: SciCrunch Registry

https://cran.r-project.org/web/packages/summarytools/vignettes/introduction.html

Software R package for data cleaning, exploring, and simple reporting. At its core reside the following four functions: freq(), ctable(), descr(), and dfSummary(). Used to quickly and neatly summarize data.

Proper citation: summarytools (RRID:SCR_026818) Copy   

•   Source: SciCrunch Registry

https://markerdb.ca/

Database that attempts to consolidate information on known clinical and selected set of pre-clinical biomarkers into single resource. Database includes five major types of biomarkers (condition specific, protein, chemical, karyotypic and genetic) and six biomarker categories (diagnostic, risk, prognostic, safety, monitoring, and response). Provides information such as: biomarker names and synonyms, associated conditions or pathologies, detailed disease descriptions, detailed biomarker descriptions, biomarker specificity, sensitivity and ROC curves, standard reference values (for protein and chemical markers), variants (for SNP or genetic markers), sequence information (for genetic and protein markers), molecular 2D and 3D structures (for protein and chemical markers), tissue or biofluid sources (for protein and chemical markers), chromosomal location and structure (for genetic and karyotype markers), clinical approval status and relevant literature references. Users can browse the data by conditions, condition categories, biomarker types, biomarker categories or search by sequence similarity through the advanced search function.

Proper citation: MarkerDB (RRID:SCR_026817) Copy   

•   Source: SciCrunch Registry

https://github.com/BostonGene/Cell_Atlas_MxIF

Software package contains all original code used to process MxIF data.

Proper citation: Cell Atlas MxIF (RRID:SCR_026872) Copy   

•   Source: SciCrunch Registry

https://pypi.org/project/requests/

Software Python package. Requests allows you to send HTTP/1.1 requests extremely easily. There’s no need to manually add query strings to your URLs. Simple, yet elegant, HTTP library.

Proper citation: Requests Library Python (RRID:SCR_026988) Copy   

•   Source: SciCrunch Registry

https://syntheticbiology.northwestern.edu/research/biofoundry/

Core facility for synthetic biology experimentation including pilot-scale fermentation, high throughput automation, biological sample analysis, and cell-free protein synthesis.

Proper citation: Northwestern University SynBio Foundry Core Facility (RRID:SCR_026869) Copy   

•   Source: SciCrunch Registry

https://gdex.ucar.edu/

Provides data for atmospheric and ocean sciences research. Contains collection of meteorological, atmospheric composition, and oceanographic observations, and operational and reanalysis model outputs, integrated with NSF NCAR High Performance Compute services to support atmospheric and geosciences research. The RDA is managed by the Data Engineering and Curation Services group of the Computational and Information Systems Laboratory at the NSF National Center for Atmospheric Research.

Proper citation: The Geoscience Data Exchange (RRID:SCR_026989) Copy   

•   Source: SciCrunch Registry

https://facs.iq.msu.edu/

Core provides access to analytical flow cytometry instrumentation and cell sorting services, as well as training and experimental consultation.

Proper citation: Michigan State University Flow Cytometry Core Facility (RRID:SCR_026903) Copy   

•   Source: SciCrunch Registry

https://tp53.cancer.gov/

Database compiles various types of data and information from literature and generalist databases on human TP53 gene variations related to cancer.

Proper citation: TP53 Database (RRID:SCR_026878) Copy   

•   Source: SciCrunch Registry

https://github.com/inesbmartins02/HYMET

Software Hybrid Metagenomic Tool.

Proper citation: HYMET (RRID:SCR_026916) Copy   

•   Source: SciCrunch Registry

https://www.dotmatics.com/capabilities/electronic-lab-notebook

Software for scientific research and development. ELN captures and manages experimental data, while Data Discovery Platform enables users to explore, analyze, and visualize that data to gain insights.

Proper citation: Dotmatics ELN and Data Discovery Platform (RRID:SCR_027029) Copy   

•   Source: SciCrunch Registry

https://github.com/cobriniklab/chevreul

Software R package and shiny app for processing, plotting, and interactive exploratory data analysis of full-length scRNA-seq as SingleCellExperiments.

Proper citation: chevreul (RRID:SCR_026966) Copy   

•   Source: SciCrunch Registry

https://www.benaroyaresearch.org/our-research/biorepositories

BRI is home to rigorously maintained biorepositories containing blood and tissue samples donated by people with immune-mediated diseases and healthy controls.Provides the collection of samples from research participants, sample processing, storage, and sharing.

Proper citation: Benaroya Research Institute BRI Biorepository Core Facility (RRID:SCR_026967) Copy   

•   Source: SciCrunch Registry

https://aireadi.org

Multidisciplinary data generation project which aims to create and share multimodal dataset optimized for artificial intelligence research in type 2 diabetes. At each release of the AI-READI dataset, two sets will be made available: public access and controlled access set. The public set will be stripped of Protected Health Information (PHI) as well as information related to the sex and race/ethnicity of the participants.

Proper citation: AI-READI (RRID:SCR_027031) Copy   

•   Source: SciCrunch Registry

https://www.quantabio.com/

Company based in Beverly, Massachusetts, provides advanced DNA and RNA amplification reagents. Offers complete library prep solutions for Illumina NGS platforms, reagents for PCR and RT PCR amplifications.

Proper citation: Quantabio (RRID:SCR_027004) Copy   

•   Source: SciCrunch Registry

https://cran.r-project.org/web/packages/ggVennDiagram/readme/README.html

Software R package to generate Venn diagram.'ggplot2' implement of Venn Diagram.

Proper citation: ggVennDiagram (RRID:SCR_026950) Copy   

•   Source: SciCrunch Registry

https://www.uoflsequencing.com/services-2-1

Provides genomic sequencing services including next-generation sequencing (NGS), single-cell analysis, and spatial transcriptomics. Offers advanced short-read and long-read sequencing technologie including our status as a PacBio Certified Service Provider.

Proper citation: University of Louisville Sequencing Technology Center Genomics Services Core Facility (RRID:SCR_027013) Copy   

•   Source: SciCrunch Registry