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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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Augusta University Medical College of Georgia Electron Microscopy and Histology Core Facility Resource Report Resource Website 10+ mentions |
Augusta University Medical College of Georgia Electron Microscopy and Histology Core Facility (RRID:SCR_026810) | service resource, access service resource, core facility | Core offers variety of specimen preparation services for transmission and scanning electron microscopy, vibratome, paraffin, cryostat and JB-4 sectioning.Offers routine staining and various histological special stains, PASH, Masson Trichrome, Van Gieson and many others, immunohistochemical services including immuno-EM studies. Core staff performs all aspects of the ultrastructural procedures from specimen processing to imaging (for Electron Microscopy, TEM and SEM) and processing, sectioning, and staining for light microscopy (paraffin, cryostat, and JB-4). | ABRF, specimen preparation services for transmission and scanning electron microscopy, vibratome, paraffin, cryostat, JB-4 sectioning, |
is listed by: ABRF CoreMarketplace has parent organization: Augusta University; Georgia; USA |
Open | ABRF_3177 | https://coremarketplace.org/RRID:SCR_026810/?citation=1 | SCR_026810 | , Augusta University Electron Microscopy and Histology Core, Augusta University Medical College of Georgia Electron Microscopy and Histology Core | 2026-08-14 09:29:33 | 15 | |||||||
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Wisconsin National Primate Research Center Pathology Services Core Facility Resource Report Resource Website 1+ mentions |
Wisconsin National Primate Research Center Pathology Services Core Facility (RRID:SCR_026782) | service resource, access service resource, core facility | Pathology Services Core is essential to nonhuman primate colony health and research at the WNPRC. PSU team consists of pathologists with ACVP and/or ACLAM board certification, research program manager, and research specialists. Unit works with clinical veterinary staff to provide rapid diagnosis and effective monitoring and interpretation of acute and chronic conditions affecting colony animals as well as subjects assigned to research studies. Core offers services including clinical pathology testing; cytology evaluation; surgical biopsy evaluation; gross post mortem examination, specialized sample collections; and histology with unbiased interpretation of lesions in reference to spontaneous disease, experimental questions, and research goals. PSU is responsible for collection, banking, and distribution of NHP samples through both Nonhuman Primate Biological Materials Distribution core and National Institute on Aging Nonhuman Primate Tissue Bank. | ABRF, nonhuman primate colony health and research, clinical pathology testing, cytology evaluation, surgical biopsy evaluation, gross post mortem examination, specialized sample collections, |
is listed by: ABRF CoreMarketplace has parent organization: University of Wisconsin-Madison; Wisconsin; USA has parent organization: Wisconsin National Primate Research Center |
Open | ABRF_3174 | https://coremarketplace.org/RRID:SCR_026782/?citation=1 | SCR_026782 | , WNPRC Pathology Services, Wisconsin National Primate Research Center Pathology Services | 2026-08-14 09:29:32 | 1 | |||||||
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University of Wisconsin-Madison Intellectual and Developmental Disabilities Models Core Facility Resource Report Resource Website 1+ mentions |
University of Wisconsin-Madison Intellectual and Developmental Disabilities Models Core Facility (RRID:SCR_026781) | service resource, access service resource, core facility | Models Core in Waisman Center provides resources including mouse models of human conditions, along with behavioral testing capabilities to characterize these models and test new therapies; stem cell technologies to support creation of induced pluripotent stem cell lines for IDD conditions as well as specialized genome editing services; microscopy technology and expertise for characterization of both stem cell and mouse models of IDD conditions. | ABRF, mouse models, human conditions, behavioral testing, new therapies, stem cell technologies, microscopy |
is listed by: ABRF CoreMarketplace has parent organization: University of Wisconsin-Madison; Wisconsin; USA |
ABRF_3173 | https://coremarketplace.org/RRID:SCR_026781/?citation=1 | SCR_026781 | , Intellectual and Developmental Disabilities (IDD) Models Core, Intellectual and Developmental Disabilities Models Core Facility | 2026-08-14 09:29:50 | 1 | ||||||||
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University of Michigan Medical School Microbiome Core Facility Resource Report Resource Website 1+ mentions |
University of Michigan Medical School Microbiome Core Facility (RRID:SCR_026820) | service resource, access service resource, core facility | Core provides microbial sequencing, high-throughput nucleic acid extraction, microbial cultivation, and strain identification. | ABRF, microbial sequencing, high-throughput nucleic acid extraction, microbial cultivation, strain identification, |
is listed by: ABRF CoreMarketplace has parent organization: University of Michigan; Ann Arbor; USA |
Open | ABRF_3201 | https://coremarketplace.org/RRID:SCR_026820/?citation=1 | SCR_026820 | University of Michigan Medical School Microbiome Core | 2026-08-14 09:29:33 | 1 | |||||||
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summarytools Resource Report Resource Website 1+ mentions |
summarytools (RRID:SCR_026818) | software toolkit, source code, software resource | Software R package for data cleaning, exploring, and simple reporting. At its core reside the following four functions: freq(), ctable(), descr(), and dfSummary(). Used to quickly and neatly summarize data. | data cleaning, data exploring, data reporting, | Free, Available for download, Freely available | https://github.com/dcomtois/summarytools | SCR_026818 | 2026-08-14 09:29:50 | 1 | ||||||||||
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MarkerDB Resource Report Resource Website 1+ mentions |
MarkerDB (RRID:SCR_026817) | database, data or information resource | Database that attempts to consolidate information on known clinical and selected set of pre-clinical biomarkers into single resource. Database includes five major types of biomarkers (condition specific, protein, chemical, karyotypic and genetic) and six biomarker categories (diagnostic, risk, prognostic, safety, monitoring, and response). Provides information such as: biomarker names and synonyms, associated conditions or pathologies, detailed disease descriptions, detailed biomarker descriptions, biomarker specificity, sensitivity and ROC curves, standard reference values (for protein and chemical markers), variants (for SNP or genetic markers), sequence information (for genetic and protein markers), molecular 2D and 3D structures (for protein and chemical markers), tissue or biofluid sources (for protein and chemical markers), chromosomal location and structure (for genetic and karyotype markers), clinical approval status and relevant literature references. Users can browse the data by conditions, condition categories, biomarker types, biomarker categories or search by sequence similarity through the advanced search function. | clinical and selected set of pre-clinical biomarkers, biomarkers, biomarker iomarker specificity, sensitivity, ROC curves, standard reference values, sequence information, names and synonyms, associated conditions or pathologies, detailed disease descriptions, detailed biomarker descriptions, b | PMID:39535054 PMID:33245771 |
Free, freely available | SCR_026817 | MarkerDB 2.0 | 2026-08-14 09:29:23 | 4 | |||||||||
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Cell Atlas MxIF Resource Report Resource Website 1+ mentions |
Cell Atlas MxIF (RRID:SCR_026872) | software application, software resource, source code | Software package contains all original code used to process MxIF data. | code used to process MxIF data, | Free, Available for download, Freely available | SCR_026872 | 2026-08-14 09:29:25 | 1 | |||||||||||
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Requests Library Python Resource Report Resource Website 1+ mentions |
Requests Library Python (RRID:SCR_026988) | software toolkit, software resource, source code, software library | Software Python package. Requests allows you to send HTTP/1.1 requests extremely easily. There’s no need to manually add query strings to your URLs. Simple, yet elegant, HTTP library. | HTTP library, send HTTP/1.1 requests, | Free, Available for download, Freely available, | https://github.com/psf/requests | SCR_026988 | requests, Requests | 2026-08-14 09:29:36 | 3 | |||||||||
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Northwestern University SynBio Foundry Core Facility Resource Report Resource Website 1+ mentions |
Northwestern University SynBio Foundry Core Facility (RRID:SCR_026869) | service resource, access service resource, core facility | Core facility for synthetic biology experimentation including pilot-scale fermentation, high throughput automation, biological sample analysis, and cell-free protein synthesis. | ABRF, synthetic biology experimentation, pilot-scale fermentation, high throughput automation, biological sample analysis, cell-free protein synthesis, |
is listed by: ABRF CoreMarketplace has parent organization: Northwestern University; Illinois; USA |
ABRF_3230 | https://coremarketplace.org/RRID:SCR_026869/?citation=1 | SCR_026869 | 2026-08-14 09:29:25 | 1 | |||||||||
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The Geoscience Data Exchange Resource Report Resource Website 1+ mentions |
The Geoscience Data Exchange (RRID:SCR_026989) | GDEX | storage service resource, service resource, data repository | Provides data for atmospheric and ocean sciences research. Contains collection of meteorological, atmospheric composition, and oceanographic observations, and operational and reanalysis model outputs, integrated with NSF NCAR High Performance Compute services to support atmospheric and geosciences research. The RDA is managed by the Data Engineering and Curation Services group of the Computational and Information Systems Laboratory at the NSF National Center for Atmospheric Research. | atmospheric and ocean sciences data, meteorological, atmospheric composition, oceanographic observation, atmospheric and geosciences research, | National Science Fundation | Free, Freely available | https://rda.ucar.edu | SCR_026989 | , NSF NCAR Research Data Archive, NCAR repository, National Center for Atmospheric Research repository | 2026-08-14 09:29:27 | 9 | |||||||
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Michigan State University Flow Cytometry Core Facility Resource Report Resource Website 1+ mentions |
Michigan State University Flow Cytometry Core Facility (RRID:SCR_026903) | service resource, access service resource, core facility | Core provides access to analytical flow cytometry instrumentation and cell sorting services, as well as training and experimental consultation. | ABRF, analytical flow cytometry instrumentation, cell sorting services, |
is listed by: ABRF CoreMarketplace has parent organization: Michigan State University; Michigan; USA |
ABRF_3235 | https://coremarketplace.org/RRID:SCR_026903/?citation=1 | SCR_026903 | 2026-08-14 09:29:25 | 3 | |||||||||
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TP53 Database Resource Report Resource Website 10+ mentions |
TP53 Database (RRID:SCR_026878) | database, data or information resource | Database compiles various types of data and information from literature and generalist databases on human TP53 gene variations related to cancer. | data and information from the literature, data and information from generalist databases, human TP53 gene variations related to cancer, | Free, Freely available | SCR_026878 | NCI TP53 Database | 2026-08-14 09:29:50 | 13 | ||||||||||
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HYMET Resource Report Resource Website 1+ mentions |
HYMET (RRID:SCR_026916) | source code, software application, software resource | Software Hybrid Metagenomic Tool. | hybrid metagenomic, | Free, Available for download, Freely available | SCR_026916 | Hybrid Metagenomic Tool | 2026-08-14 09:29:50 | 1 | ||||||||||
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Dotmatics ELN and Data Discovery Platform Resource Report Resource Website 1+ mentions |
Dotmatics ELN and Data Discovery Platform (RRID:SCR_027029) | software application, software resource | Software for scientific research and development. ELN captures and manages experimental data, while Data Discovery Platform enables users to explore, analyze, and visualize that data to gain insights. | capture and manage experimental data, explore data, analyze data, visualize data, | Restricted | SCR_027029 | Dotmatics Electronic Lab Notebook and Data Discovery Platform | 2026-08-14 09:29:27 | 2 | ||||||||||
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chevreul Resource Report Resource Website 1+ mentions |
chevreul (RRID:SCR_026966) | software toolkit, source code, software resource | Software R package and shiny app for processing, plotting, and interactive exploratory data analysis of full-length scRNA-seq as SingleCellExperiments. | SingleCellExperiments, processing, plotting, interactive exploratory, data analysis, full-length scRNA-seq, | is related to: Shiny | Free, Available for download, Freely available | SCR_026966 | 2026-08-14 09:29:26 | 2 | ||||||||||
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Benaroya Research Institute BRI Biorepository Core Facility Resource Report Resource Website 1+ mentions |
Benaroya Research Institute BRI Biorepository Core Facility (RRID:SCR_026967) | core facility, access service resource, storage service resource, biospecimen repository, service resource, material storage repository | BRI is home to rigorously maintained biorepositories containing blood and tissue samples donated by people with immune-mediated diseases and healthy controls.Provides the collection of samples from research participants, sample processing, storage, and sharing. | ABRF, |
is listed by: ABRF CoreMarketplace has parent organization: Benaroya Research Institute |
ABRF_3243 | https://coremarketplace.org/?FacilityID=3243&citation=1 | SCR_026967 | , BRI Biorepository, Benaroya Research Institute BRI Biorepository | 2026-08-14 09:29:51 | 1 | ||||||||
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AI-READI Resource Report Resource Website 1+ mentions |
AI-READI (RRID:SCR_027031) | project portal, data or information resource, database, portal | Multidisciplinary data generation project which aims to create and share multimodal dataset optimized for artificial intelligence research in type 2 diabetes. At each release of the AI-READI dataset, two sets will be made available: public access and controlled access set. The public set will be stripped of Protected Health Information (PHI) as well as information related to the sex and race/ethnicity of the participants. | Multidisciplinary data generation, create and share multimodal dataset, artificial intelligence, type 2 diabetes, | is listed by: NIDDK Information Network (dkNET) | NIH Bridge2AI Program ; NIH Office of the Director 1OT2OD032644; NIDDK P30 DK035816 |
PMID:39516364 PMID:39915016 |
SCR_027031 | Artificial Intelligence Ready and Equitable Atlas for Diabetes Insights | 2026-08-14 09:29:36 | 1 | ||||||||
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Quantabio Resource Report Resource Website 1+ mentions |
Quantabio (RRID:SCR_027004) | reagent supplier, commercial organization, material resource | Company based in Beverly, Massachusetts, provides advanced DNA and RNA amplification reagents. Offers complete library prep solutions for Illumina NGS platforms, reagents for PCR and RT PCR amplifications. | DNA ragents, RNA reagents, amplification reagents, Illumina NGS platforms library, PCR, RT PCR, | SCR_027004 | 2026-08-14 09:29:51 | 2 | ||||||||||||
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ggVennDiagram Resource Report Resource Website 10+ mentions |
ggVennDiagram (RRID:SCR_026950) | software toolkit, source code, software resource | Software R package to generate Venn diagram.'ggplot2' implement of Venn Diagram. | generate Venn diagram, | uses: ggplot2 | National Natural Science Foundation of China ; Royal Society-Newton Advanced Fellowship ; National Key Research Program of China ; Wuhan Applied Foundational Frontier Project ; Fundamental Research Funds for the Central Universities |
PMID:34557218 | Free, Available for download, Freely available | https://github.com/gaospecial/ggVennDiagram | SCR_026950 | 2026-08-14 09:29:35 | 46 | |||||||
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University of Louisville Sequencing Technology Center Genomics Services Core Facility Resource Report Resource Website 1+ mentions |
University of Louisville Sequencing Technology Center Genomics Services Core Facility (RRID:SCR_027013) | service resource, access service resource, core facility | Provides genomic sequencing services including next-generation sequencing (NGS), single-cell analysis, and spatial transcriptomics. Offers advanced short-read and long-read sequencing technologie including our status as a PacBio Certified Service Provider. | ABRF, genomic sequencing, next-generation sequencing (NGS), single-cell analysis, spatial transcriptomics, |
is listed by: ABRF CoreMarketplace has parent organization: University of Louisville; Kentucky; USA |
ABRF_3247 | https://coremarketplace.org/?FacilityID=3247&citation=1 | SCR_027013 | Sequencing Technology Center | 2026-08-14 09:29:27 | 1 |
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