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https://bhpc.uhnresearch.ca/

Core provides services including Basic High-Throughput Sequencing Analysis, Advanced Data Analysis, High Performance Computing.

Proper citation: University Health Network Bioinformatics and High Performance Computing HPC Core Facility (RRID:SCR_027532) Copy   

•   Source: SciCrunch Registry

https://sttarr.ca/

Offers services to support studies in medical fields across oncology, cardiology, metabolic diseases, radiotheranostics and more.Helps with study design to final data analysis, including GLP-compliant histopathology services.

Proper citation: University Health Network Spatio-Temporal Targeting and Amplification of Radiation Response Core Facility (RRID:SCR_027531) Copy   

•   Source: SciCrunch Registry

https://www.uhn.ca/

public research and teaching hospital network in Toronto, Ontario, Canada. It is affiliated with the Temerty Faculty of Medicine at the University of Toronto, and is the largest health research organization in Canada, ranking first in the country for total research funding.

Proper citation: University Health Network (RRID:SCR_027533) Copy   

•   Source: SciCrunch Registry

http://www.aomf.ca

Core offers services in optical microscopy experiments including: confocal, multiphoton, super-resolution, FRAP, FRET, live-cell timelapse, whole-slide scanning, image analysis and more.

Proper citation: University Health Network Advanced Optical Microscopy Core Facility (RRID:SCR_027535) Copy   

•   Source: SciCrunch Registry

https://www.qd-taiwan.com/siteDocs/productBrochures/NanoTemper_NT115_series.pdf

Instrument used to quantify biomolecular interactions and measure their binding affinity using MicroScale Thermophoresis. Can determine the strength of binding between all types of biomolecules, from single ions to large complexes, in various complex samples and buffer conditions.

Proper citation: NanoTemper: Monolith NT.115 (RRID:SCR_027500) Copy   

•   Source: SciCrunch Registry

https://www.github.com/bactopia/bactopia

Software pipeline for complete analysis of bacterial genomes.

Proper citation: Bactopia (RRID:SCR_027581) Copy   

•   Source: SciCrunch Registry

https://www.concordia.ca/

Concordia University is a public English-language research university located in Montreal, Quebec, Canada. Founded in 1974 following the merger of Loyola College and Sir George Williams University, Concordia is one of the three universities in Quebec where English is the primary language of instruction.

Proper citation: Concordia University; Montreal; Canada (RRID:SCR_027512) Copy   

•   Source: SciCrunch Registry

https://human-settlement.emergency.copernicus.eu/

Project portal from the European Union that creates global geographical data about the evolution of human habitation on Earth. This information is in the form of population density maps, built-up maps, and settlement maps. This information is produced using new geographic data mining tools and knowledge and analytics based on empirical data.

Proper citation: Global Human Settlement Layer (RRID:SCR_027514) Copy   

•   Source: SciCrunch Registry

https://gpspalm.biocuckoo.cn/

Software deep learning-based graphic presentation system for the prediction of S-palmitoylation sites in proteins.

Proper citation: GPS-Palm (RRID:SCR_027506) Copy   

•   Source: SciCrunch Registry

https://www.zeiss.com/microscopy/us/products/light-microscopes/stereo-and-zoom-microscopes/stereo-discovery-v12.html

Microscope patented optics are setting new standards in modular common main objective stereomicroscopy. Thanks to higher resolution and significantly increased contrast, they provide 20% more image information – in addition to 3D images. The innovative operating concept SyCoP (Systems Control Panel) combines all essential functions of stereomicroscope in single handy operating unit. Used particularly for applications in materials research, quality control, biology and medical research.

Proper citation: Zeiss: SteREO Discovery.V12 (RRID:SCR_027509) Copy   

•   Source: SciCrunch Registry

https://ibidi.com

German manufacturer specializing in advanced cell culture and imaging products, including µ-Slide chambers, microfluidic devices, and reagents for live-cell analysis. Ibidi’s technologies support high-resolution microscopy, cell migration assays, angiogenesis studies, and immunological research.

Proper citation: Ibidi GmbH (RRID:SCR_027508) Copy   

•   Source: SciCrunch Registry

https://aideepmed.com/COACH/

Web application for protein-ligand binding site prediction. Starting from given structure of target proteins, COACH will generate complementray ligand binding site predictions using two comparative methods, TM-SITE and S-SITE, which recognize ligand-binding templates from the BioLiP protein function database by binding-specific substructure and sequence profile comparisons.

Proper citation: COACH (RRID:SCR_027684) Copy   

•   Source: SciCrunch Registry

https://prankweb.cz/

Web application for ligand binding site prediction. Used for prediction of ligand binding sites from protein structure.

Proper citation: PrankWeb (RRID:SCR_027683) Copy   

•   Source: SciCrunch Registry

https://www.dnagenotek.com/row/index

Subsidiary of OraSure Technologies, Inc. focuses on providing biological sample collection products and services for human genomics, microbiome and infectious disease applications. Offers Research Use Only products to collect and preserve large amounts of DNA or RNA from multiple sample types.

Proper citation: DNA Genotek Inc (RRID:SCR_027611) Copy   

•   Source: SciCrunch Registry

https://www.bioconductor.org/packages/release/bioc/html/imcRtools.html

Software R package that supports the handling and processing of IMC multiplex imaging data. Used for handling and analysing imaging mass cytometry data.

Proper citation: imcRtools (RRID:SCR_027613) Copy   

•   Source: SciCrunch Registry

https://gitlab.com/csbayrak/ips

Software with approach that leverages machine learning and network biology to predict brain gene expression from blood-derived features.

Proper citation: Integrative Prediction Strategy (RRID:SCR_027608) Copy   

•   Source: SciCrunch Registry

https://cran.r-project.org/web/packages/mirt/index.html

Software package for the R Environment. Used for estimating multidimensional item response theory parameters for exploratory and confirmatory models by using maximum-likelihood meth- ods.

Proper citation: mirt (RRID:SCR_027662) Copy   

•   Source: SciCrunch Registry

https://cran.r-project.org/web/packages/ltm/index.html

Software R package for analysis of multivariate dichotomous and polytomous data using latent trait models under the Item Response Theory approach.

Proper citation: ltm:Latent Trait Models under IRT (RRID:SCR_027664) Copy   

•   Source: SciCrunch Registry

https://cran.r-project.org/web/packages/lavaan/index.html

Software R package for latent variable analysis. Used to estimate variety of multivariate statistical models. Fit a variety of latent variable models, including confirmatory factor analysis, structural equation modeling and latent growth curve models.

Proper citation: lavaan (RRID:SCR_027663) Copy   

•   Source: SciCrunch Registry

https://cran.r-project.org/web/packages/cmprskcoxmsm/index.html

Software R package uses inverse probability weighting methods to estimate treatment effect under marginal structure model for the cause-specific hazard of competing risk events. Estimates also the cumulative incidence function (i.e. risk) of the potential outcomes, and provides inference on risk difference and risk ratio.

Proper citation: cmprskcoxmsm (RRID:SCR_027665) Copy   

•   Source: SciCrunch Registry