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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Massachusetts University Medical School Bioinformatics Core Facility Resource Report Resource Website 1+ mentions |
Massachusetts University Medical School Bioinformatics Core Facility (RRID:SCR_017701) | BioCore | access service resource, core facility, service resource | Core to evaluate, select, and implement computational solutions for analysis of biological data. | Bioinformatics, core, analysis, genomic, data | Restricted | ABRF_129, SCR_017716 | SCR_017701 | Bioinformatics Core | 2026-09-19 12:59:28 | 5 | ||||||||
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Steve and Cindy Rasmussen Institute for Genomic Medicine Clinical Laboratory Core Facility at Nationwide Children�s Hospital Resource Report Resource Website 1+ mentions |
Steve and Cindy Rasmussen Institute for Genomic Medicine Clinical Laboratory Core Facility at Nationwide Children�s Hospital (RRID:SCR_017840) | IGM | access service resource, core facility, service resource | Core performs and analyzes integrated clinical genomic, molecular, microarray, FISH, and cytogenetic analyses to diagnose broad range of inherited diseases and cancer. Serves as centralized clinical testing laboratory for Children Oncology Group leukemia, Wilms tumor, medulloblastoma, and rhabdomyosarcoma studies. Emphasizes collaborative interactions between clinicians, physician-scientists, and basic science investigators to quickly transition cutting edge research results into cutting edge diagnostics, using technology platforms. Services include Whole Exome Sequencing (WES),cytogenetic chromosome analysis,Fluorescence in situ Hybridization,Chromosomal microarray analysis,Molecular Genetic Testing - Inherited Diseases,Molecular Genetic Testing - Cancer. | Clinical, genomic, molecular, microarray, FISH, cytogenetic, inherited, disease, cancer, testing, children, oncology, leukemia, medulloblastoma, rhadomyosarcoma, diagnosis, whole, exome, sequencing, chromosomal, microarray, analysis, molecular, genetic, service, core, ABRF | is listed by: ABRF CoreMarketplace | Restricted | ABRF_631 | SCR_017840 | Institute for Genomic Medicine Clinical Laboratory | 2026-09-19 12:59:32 | 8 | |||||||
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Northwestern University High Throughput Analysis Laboratory Core Facility Resource Report Resource Website 1+ mentions |
Northwestern University High Throughput Analysis Laboratory Core Facility (RRID:SCR_017879) | NU-HTA | access service resource, core facility, service resource | Core provides expertise and resources for large scale biology. Helps to set up, run, gather data and perform analysis in drug discovery research, biochemistry, cell and organismal biology, functional genomic screening, and synthetic genetic. Works with proteins, nucleic acids, small model organisms, and microbial strains. Provides tissue culture,produces and uses lentivirus particles, screens compound libraries, does experiments for investigators,generates preliminary data to figure out if idea is workable, discusses project development. Services include Macromolecular binding, biochemical, and cell-based assays,High content screening with widefield or confocal optics,Nanoliter liquid handling up to 1536-well density,Whole-plate kinetic assays (ion currents, GPCR signaling),Compound library screening,CRISPR/Cas9 screening (multiplexed libraries),Analysis of large data sets,Fluorescence Thermal Shift assay (measures protein melting),Complex liquid handling work flows. | Collect, perform, analysis, drug, discovery, biochemistry, cell, organisational, biology, functional, genomic, screening, synthetitc, genetic, data, assay, library, CRISPR, Cas9, kinetic, fluorescence, shift, protein, melting, core, service |
is listed by: ABRF CoreMarketplace has parent organization: Northwestern University; Illinois; USA |
Open | SCR_017771, ABRF_724 | https://coremarketplace.org/?FacilityID=724&citation=1 | SCR_017879 | Northwestern Highthroughput Analysis Laboratory | 2026-09-19 12:59:33 | 3 | ||||||
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Penn State College of Medicine Genome Sciences Core Facility Resource Report Resource Website 50+ mentions |
Penn State College of Medicine Genome Sciences Core Facility (RRID:SCR_021123) | access service resource, core facility, service resource | Provides consultation, instrumentation and services in genomic, epigenomic and transcriptomic studies, analysis of candidate SNPs and mRNAs to whole genome, exome, epigenome and transcriptome sequencing. Services are also available for variety of study designs extending from few laboratory samples to large clinical projects involving hundreds or thousands of samples.Bioinformatics service is available for data analysis.Facility receives either tissue, DNA/RNA or customer generated NGS libraries. Samples are processed based on agreement reached during consultations on design of experiment. | genomic, epigenomic, transcriptomic, consultation, instrumentation, services, iLab, ABRF, ABRF |
is listed by: ABRF CoreMarketplace has parent organization: Pennsylvania State Hershey College of Medicine; Pennsylvania; USA |
open | ABRF_1162 | https://coremarketplace.org/?FacilityID=1162 | SCR_021123 | Genome Sciences and Bioinformatics Facility, Pennsylvania State University Genome Sciences and Bioinformatics Facility | 2026-09-19 12:59:39 | 58 | |||||||
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University of North Carolina at Chapel Hill Translational Genomics Lab Core Facility Resource Report Resource Website 1+ mentions |
University of North Carolina at Chapel Hill Translational Genomics Lab Core Facility (RRID:SCR_025231) | TGL | access service resource, core facility, service resource | Core facility within Lineberger Comprehensive Cancer Center that performs sample processing for the molecular, pathologic, and genomic characterization of patient-derived specimens using high-end instrumentation and state-of-the-art methods. Service offerings include nucleic acid extraction, gene expression profiling, spatial genomics, next-generation sequencing library preparation, and high-throughput sequencing. Protocols leverage the reproducibility and reliability of automated instrumentation to minimize batch effects and processing errors (e.g. sample swaps). These workflows have been continuously optimized over the last decade, with a sample-to-answer historic success rate of ~90% for the >15,000 FFPE samples TGL has processed. | ABRF, sample processing, molecular, pathologic, genomic, patient derived specimens characterization, |
is listed by: ABRF CoreMarketplace has parent organization: University of North Carolina at Chapel Hill; North Carolina; USA |
ABRF_2716 | https://coremarketplace.org/?FacilityID=2716&citation=1 | SCR_025231 | , University of North Carolina at Chapel Hill UNC LCCC Translational Genomics Lab (TGL), UNC LCCC Translational Genomics Lab (TGL) | 2026-09-19 01:00:19 | 7 | |||||||
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PathoMAN Resource Report Resource Website 1+ mentions |
PathoMAN (RRID:SCR_026552) | PathoMAN | software resource, web application | Web application to automate germline genomic variant curation from clinical sequencing based on ACMG guidelines. Aggregates multiple tracks of genomic, protein and disease specific information from public sources. | Aggregates multiple tracks, automate germline genomic variant curation, clinical sequencing, genomic, protein, disease specific information, public sources, | NCI P30CA008748; NCI P50CA221745; NCI R21CA029533 |
PMID:30787465 | Free, Freely available, | SCR_026552 | Pathogenicity of Mutation Analyzer | 2026-09-19 01:00:52 | 3 | |||||||
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PacGenomics Resource Report Resource Website |
PacGenomics (RRID:SCR_027700) | commercial organization, service resource | Company provides medical laboratory services, specializing in genetic and genomic testing. | genetic, genomic, testing services, | SCR_027700 | 2026-09-19 01:01:16 | 0 | ||||||||||||
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University of Arkansas AIMRC Data Science Core Facility Resource Report Resource Website |
University of Arkansas AIMRC Data Science Core Facility (RRID:SCR_028681) | access service resource, core facility, service resource | Core specializes in artificial intelligence-based approaches to elucidate relationships between large imaging, bioenergetics, genomic, and proteomic data sets. Provided services include: 1) foundational training for those getting started with high-performance computing and Arkansas Research Platform (ARP), 2) training and support for the collaborative use of a 508 TB data storage server exclusively maintained for and catering to AIMRC researchers, 3) training for Python programming, basic data mining, and machine learning, 4) training and support for using open-source deep learning based biomedical imaging resources (e.g., ZeroCostDL4Mic and Bioimage Model Zoo), and 5) customized solutions for deep learning based and large foundational models based biomedical imaging analysis, multi-omics data integration and analysis, and quantitative analysis pipelines for large data sets. | ABRF, Center of Biomedical Research Excellence (COBRE), data science services, large imaging, bioenergetics, genomic, proteomic, data sets, |
is listed by: ABRF CoreMarketplace has parent organization: University of Arkansas; Arkansas; USA |
NIGMS P20GM139768 | ABRF_6033 | https://coremarketplace.org/RRID:SCR_028681/?citation=1 | SCR_028681 | , Arkansas Integrative Metabolic Center (AIMRC) Data Science Core | 2026-09-19 01:01:37 | 0 |
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