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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
http://harvard.eagle-i.net/i/0000012e-72f6-fe83-55da-381e80000000
Core facility that provides the following services: DNA screening from clinical samples, Comparison of bacterial associations in health vs. disease by microarray, Human microbial identification microarray service.
The Microbial Identification Microarray Core (MIM) at The Forsyth Institute is a one-of-a-kind core service that enables the rapid determination of bacterial profiles of human clinical samples. The first MIM offering focuses on the detection of bacterial profiles from clinical samples from the oral cavity. Drs. Bruce Paster and Floyd Dewhirst, have used molecular analyses based on 16S rRNA sequencing to identify about 600 oral bacterial species, of which over half have not yet been cultivated. Using this information, they have developed the Human Oral Microbe Identification Microarray, or HOMIM, which allows the simultaneous detection of about 300 of the most prevalent oral bacterial species, including those that cannot yet be grown in vitro. Microarrays targeting bacterial species of the human and mouse intestines are presently under development. In addition, exploratory and pilot studies to identify bacteria within any human clinical sample by 16S rRNA cloning and sequencing are available. This service is available to researchers from all academic institutions and to industry. Researchers submit DNA isolated from clinical samples and receive an online comprehensive data analysis and easy-to-interpret readout. Depending upon the number of samples to be analyzed and position in the queue, results can usually be obtained within days. Note that results are presently for research purposes only.
Proper citation: Forsyth Human Microbe Identification Microarray Core (RRID:SCR_009788) Copy
http://harvard.eagle-i.net/i/0000012e-6d2d-b3e2-55da-381e80000000
Out of service. Documented on May,04,2021. This record has been removed from eagle-i search; this page is an archival copy only. Imaging Services offers high-quality poster printing.
Proper citation: Forsyth Imaging Services Core Facility (RRID:SCR_009789) Copy
http://harvard.eagle-i.net/i/0000012e-350e-72de-550e-f59280000000
Analysis of air pollution samples: including gravimetric determination of particle mass from filter samples; chemical analysis for passive and active samples of pollutant particles and gases; instrumental analysis of elemental and organic carbon collected on quartz fiber filters; trace elemental analysis of filter samples, and ; reflectance analysis of atmospheric black carbon.
Proper citation: HSPH Inorganic Chemistry Laboratory (RRID:SCR_009787) Copy
Core offers consulting and support services for detection of different fluorescent parameters simultaneously, RBC contaminated samples, and high throughput analysis using 96 or 384-well plates. Cell sorter allows for collecting cells/particulates of interest, after screening for positively selected markers, downstream applications, and is capable of sorting four separate cell populations simultaneously.
Proper citation: Forsyth Institute Flow Cytometry Core Facility (RRID:SCR_009785) Copy
https://bioinformatics.forsyth.org/
Core specializes in oral microbial genomics, taxonomy, phylogenetics and the next generation sequence (NGS) data analysis with both in house and cloud high performance computational resource. In addition to supporting funded bioinformatics projects, Bioinformatics Core will also provide computational support to Forsyth and other researchers for processing, analyzing, and interpreting biological data.
Proper citation: Forsyth Institute Bioinformatics Core Facility (RRID:SCR_009783) Copy
http://harvard.eagle-i.net/i/0000012e-357a-187b-550e-f59280000000
Electron microscope access facility. All new users must be trained and approved by the facility manager to use the equipment in the facility and obtain the financial approval from their PI and financial manager. Please submit a PO number or the Harvard billing code prior to the first use of the facility. Approved users can sign up with the facility manager.
Proper citation: HSPH Electron Microscopy Facility (RRID:SCR_009819) Copy
http://ohsu.eagle-i.net/i/0000012a-2500-0a1a-d994-629180000000
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on December 6,2022. Core facility that provides the following services: Equipment design and fabrication service, Computer interfacing service, Embedded processor design service, Circuit board design service, Research equipment consulting. The Electronics & Instrument Design Core Resource provides hands-on design and fabrication of specialized equipment for research projects. Projects involve analog and digital electronics design, microcontroller, software development and optical and embedded processor design. The core director, John Hunt, MSEE, is a senior research engineer and instructor in the Department of Biomedical Engineering, OHSU School of Medicine. OHSU School of Medicine. He has worked as a research engineer at OGI/OHSU since 1980 and has developed equipment for many research projects and departments.
Proper citation: OHSU Electronics and Instrumentation Design Core Resource (RRID:SCR_009971) Copy
http://upr.eagle-i.net/i/0000012b-00bf-e710-9e37-5ded80000000
These facilities contain three examination/study rooms, two gynecological examination rooms, two infusion rooms, one dental room, and one record room.
Proper citation: Puerto Rico Clinical and Translational Research Consortium Nursing Services (RRID:SCR_009970) Copy
http://ohsu.eagle-i.net/i/00000139-306b-819d-1eaf-424280000000
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on December 6, 2022. Core facility that provides the following services: Data storage planning, Database design and development, Website development. The BMISR provides expertise in data collection and management to clinical researchers. Through effective trial management and innovative data collection, clinical trial efficiency can be improved and high quality data collected for analysis. This automated data collection, storage and reporting reduce data errors and save time and effort during collection and analysis. Consultation and services are available during every stage of the research process--from grant proposal writing through research data collection, management and analysis. We can provide custom applications for data collection, management and dissemination using a broad array of technologies and tools. We can help with standalone database applications (such as Access), using scannable paper forms, developing web applications, designing database applications, just to name a few.
Proper citation: OHSU Biomedical Informatics Shared Resource (RRID:SCR_009966) Copy
https://www.ohsu.edu/lab-services/biochemical-genetics
Core facility that provides the following services: Amino acid analyses, Quantitative glycine analysis, Phytanic acid analysis, plasma, Succinylacetone with organic acids analysis, urine, Tay-Sachs carrier screening, serum, Very long chain fatty acid analysis, plasma, Quantitative alanine analysis, Aspartylglucosamine analysis, urine, Carnitine analysis, plasma, Cystathionine analysis, urine, Quantitiative cystine analysis, urine, Hexosaminidase A & B analysis, serum, Homocystine analysis, urine, Ketolytic enzyme testing, Leukocyte preparation, Mucopolysaccharide analysis, urine, Qualitative analysis of oligosaccharides, urine, Organic acids analysis, Quantitative analysis of phenylalanine, plasma, Phosphoethanoloamine analysis, urine. The OHSU Biochemical Genetics Laboratory is dedicated to providing specialized laboratory testing and comprehensive diagnostic evaluation of rare and unusual inherited metabolic diseases. Our expertise includes interpretation of results which requires detailed knowledge of the field by individuals specializing in clinical biochemical genetics.
Proper citation: OHSU Biochemical Genetics Laboratory (RRID:SCR_009964) Copy
http://ohsu.eagle-i.net/i/0000013c-e05d-718e-6d01-360380000000
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on December 6,2022. Core facility provides the following services: Data Management Consultation, Research Databases: REDCap & Customized Databases, Functional Genomics Consultation: Microarray Proteomics. The Biomedical Informatics Program (BMIP) provides investigators with informatics tools and methodologies to support translational researchers. Using a hybrid of collaborative and service approaches, BMIP is continually developing and deploying an array of informatics tools for bench research (bioinformatics), bedside research (clinical research informatics), and translation to practice (medical informatics). BMIP also provides a platform for collaborative and multidisciplinary informatics education and research. The Biomedical Informatics Program includes two major areas of emphasis: Translational Bioinformatics - Novel methodology development, Statistical Genetics, Functional Genomics, Clinical Research Informatics, Research Data Warehouse - Using Epic and other clinical data for research, Clinical research data management software, Epic as an interventional tool for research
Proper citation: Oregon Clinical and Translational Research Institute Biomedical Informatics Program (RRID:SCR_009965) Copy
https://www.ohsu.edu/pharmacokinetics-core
Core for analysis of drugs and their metabolites and bio-molecules such as simple peptides, oligonucleotides, carbohydrates, lipids, fatty acids and steroids. Provides open access to laboratory where users prepare and analyze their own samples by HPLC, GC/MS or LC/MS on equipment maintained by core personnel. Provides analysis of samples including development of analytical methods, sample preparation, and data analysis for clinical trials as well as basic science investigations.
Proper citation: OHSU Bioanalytical Shared Resource Pharmacokinetics Core Facility (RRID:SCR_009963) Copy
https://www.ohsu.edu/advanced-imaging-research-center/about-advanced-imaging-research-center
Provides magnetic resonance instruments including Siemens 3 Tesla Prisma, Siemens Magnetom 7 Tesla, and Bruker 11.75 Tesla to support research investigating normal physiology, brain development and aging, and disease pathophysiology with high performance non invasive imaging capabilities.
Proper citation: OHSU Advanced Imaging Research Center Core Facility (RRID:SCR_009960) Copy
http://harvard.eagle-i.net/i/0000012e-5946-2efe-55da-381e80000000
The Biostatistics Center provides support to MGH investigators, as well as serving as a Coordinating Center for several NIH-supported projects. The Center''s staff includes biostatisticians, physicians, research nurses, data managers, project managers, research assistants, and computing staff.
Proper citation: MGH Biostatistics Center (RRID:SCR_009913) Copy
https://joslinresearch.org/drc-cores/Flow-Cytometry-Core
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on October 27,2023. Core that provides cell sorting and flow cytometry services. Specific services include cell analysis, large object sorting,magnetic cell enrichment, and automatic cell counting.
Proper citation: Joslin Diabetes Center Flow Cytometry Core Facility (RRID:SCR_009878) Copy
http://harvard.eagle-i.net/i/0000012e-590e-5fe8-55da-381e80000000
Core facility that provides the following services: Data management service, SNP genotyping service. The Genetics Core was established in 1991 with the aim of promoting and facilitating genetic studies of diabetes and its complications in humans at the Joslin Diabetes Center and collaborating institutions. More than 1,000 DNA samples from human subjects have been collected in these years and are available to researchers. The Genetics Core also provides services assisting investigators in the use of these samples. Investigators wishing to use the Core resources should contact Dr. Alessandro Doria by phone at x4340 or (617) 732-2406, or by e-mail. A detailed project description is required for the use of DNA samples. There is no restriction on the Core access.
Proper citation: JDC Genetics Core (RRID:SCR_009879) Copy
https://joslinresearch.org/drc-cores/Animal-Physiology-Core
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on October 27,2023. Core that provides technically advanced physiological evaluation of metabolism in diabetes, obesity, and their associated complications in rodents for DRC investigators and outside users. It also provides training of investigators and trainees in several physiological procedures.
Proper citation: Joslin Diabetes Center Animal Physiology Core Facility (RRID:SCR_009876) Copy
https://joslinresearch.org/drc-cores/Advanced-Microscopy-Core
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on October 27,2023. Core that provides services for performing specific morphological procedures, providing training and access to equipment, maintaining the specialized microscopes, and giving advice and interpretation.
Proper citation: Joslin Diabetes Center Advanced Microscopy Core Facility (RRID:SCR_009875) Copy
http://hunter-cuny.eagle-i.net/i/00000136-a791-3ad9-949b-425080000000
Core facility that provides the following services: Single-crystal X-ray analysis. The mission of the CUNY X-ray Diffraction (X-ray) Facility is to perform single-crystal analyses for the structure determination of molecules, which make up a crystal. This technique is called single-crystal X-ray crystallography. It is the ultimate method for definitive determination of molecular structures at the atomic level for both organic and inorganic compounds. Its uses range from simple identification of compounds to various exotic configuration and conformational studies.
Proper citation: Hunter X-ray Diffraction Facility (RRID:SCR_009872) Copy
https://joslinresearch.org/drc-cores/Advanced-Genomics-and-Genetics-Core
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on October 27,2023. Core that provides services for genetic and genomic analysis, including DNA extraction from blood, access to DNA collections from the Core?s repository, SNP genotyping, and support for gene expression studies based on both high-density oligonucleotide arrays and real-time quantitative PCR.
Proper citation: Joslin Diabetes Center Advanced Genomics and Genetics Core Facility (RRID:SCR_009873) Copy
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