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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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Stanford University School of Medicine High Throughput Bioscience Center Core Facility Resource Report Resource Website 1+ mentions |
Stanford University School of Medicine High Throughput Bioscience Center Core Facility (RRID:SCR_017794) | HTBC | service resource, core facility, access service resource | Core provides fully automated high throughput screening (HTS) of Compound Libraries (130,000+ compounds) for both enzyme/protein-based assays and cell-based assays, using Caliper Life Sciences Staccato system;Genomic siRNA screening with siARRAY whole human genome siRNA library from Dharmacon targeting 21,000 genes, using Agilent Bravo system;High-Content Screening using ImageXpress Micro automated fluorescent microscope with live cell, bright field, phase contrast and integrated plate handling with Thermo Catalyst CRS, and image analysis using MetaXpress software;High Throughput Molecular Biology reagents and services, including access to cDNA libraries (Human ORFeome collection, 15,000 genes) and 96 and 384-well bead clean-ups and PCR setup (Biomek FX and Agilent Bravo), and other automation steps in collaboration with SFGF;High-throughput assay development assistance with cell culture, experiment design, robotic programming and Standard Operating Procedure drafting;Screening data analysis assistance with protocols, hit determination and structure activity analyses using MDL chemical database ISIS/HOST, Plate Manager, Assay Explorer and Report Manager. Use of microplate reader detection systems, including Tecan Infinite M1000 and Infinite M1000 PRO and Molecular Devices Analyst GT for fluorescence; fluorescence polarization; time-resolved fluorescence; absorbance and luminescence (with injectors and AlphaScreen); and Flexstation II 384, for kinetic fluorescence reads to measure calcium mobilization and ion channels.Use of liquid-handling robots, including Sciclone ALH3000 (96- and 384-well pipetting), Agilent Bravo (96- and 384-well pipetting), Velocity11 VPrep (96-well pipetting), Bio-Tek plate washers/dispensers, Matrix Wellmate and Titertek/Labsystems Multidrop microplate dispensers, and Velocity11 PlateLoc plate heat sealer;Training for most of these services. | High, throughput, bioscience, automated, screening, compound, library, enzyme, protein, assay, human, whole, genome, cDNA, service, core | Open | SCR_023235, ABRF_2460 | https://coremarketplace.org/?FacilityID=2460 | SCR_017794 | High Throughput Bioscience Center | 2026-08-06 09:29:13 | 1 | |||||||
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Penn State College of Medicine Mass Spectrometry and Proteomics Core Facility Resource Report Resource Website 10+ mentions |
Penn State College of Medicine Mass Spectrometry and Proteomics Core Facility (RRID:SCR_017831) | service resource, core facility, access service resource | Core provides mass spectrometry analyses and identification of proteins, peptides, oligonucleotides, carbohydrates and small molecules.Other services include separations of complex protein and/or peptide mixtures; protein expression analysis (iTraq, SILAC, SWATH/DIA label-free); quantitation of protein, cytokine, amino acid and other small-molecule levels; bioinformatics; spot-cutting and robotics; and gel imaging and analysis., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | Mass, spectrometry, analysis, identification, protein, peptide, oligonucleotide, carbohydrate, molecule, separation, complex, mixture, expression, analysis, quantitation, bioinformatics, gel, imaging, service, core, ABRF | is listed by: ABRF CoreMarketplace | THIS RESOURCE IS NO LONGER IN SERVICE | ABRF_617 | SCR_017831 | Penn State College of Medicine's Mass Spectrometry & Proteomics Core | 2026-08-06 09:29:11 | 35 | ||||||||
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New York University School of Medicine Langone Health Proteomics Laboratory Core Facility Resource Report Resource Website 1+ mentions |
New York University School of Medicine Langone Health Proteomics Laboratory Core Facility (RRID:SCR_017926) | service resource, core facility, access service resource | Core offers specialized expertise for analysis of proteins and peptides using mass spectrometry. Develops new methods and customized approaches for proteomic analysis and suggests experimental strategies and sample preparation prior to mass spectrometry analysis. Services include:comprehensive protein identification ,analysis of affinity purified complexes,characterizing protein post-translational modifications,de novo sequencing,label and label-free quantitation ,multiplexed quantitation global phosphorylation and ubiquitin analysis,analysis of laser-capture microdissected formalin-fixed paraffin-embedded tissue,secretome analysis,crosslinking analysis,disulfide mapping. | Analysis, protein, peptide, mass, spectrometry, proteomics, sample, preparation, de novo sequencing, quantitation, serice, core, ABRF, USEDit |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: New York University School of Medicine; New York; USA |
NCI P30 CA016087 | ABRF_820 | https://coremarketplace.org/?FacilityID=820&citation=1 | SCR_017926 | New York University School of Medicine Langone Health Proteomics Laboratory, Proteomics Laboratory | 2026-08-06 09:29:17 | 9 | |||||||
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Queensland University of Technology Central Analytical Research Facility (CARF) Proteomics and Small Molecule Mass Spectrometry Core Facility Resource Report Resource Website |
Queensland University of Technology Central Analytical Research Facility (CARF) Proteomics and Small Molecule Mass Spectrometry Core Facility (RRID:SCR_017933) | service resource, core facility, access service resource | Core provides liquid chromatography and gas chromatography mass spectrometry instrumentation for selective identification and reproducible quantification of trace-level biomolecules in complex samples. Services include qualitative, quantitative and structural analysis of proteins, lipids, metabolites, pesticides, pharmaceuticals and volatile organic compounds. Tests can be performed as long as molecules of interest are amenable to ionisation technique employed in source of mass spectrometer. Depending on instrument type, samples may be solid, liquid or gas. Mass spectrometry platforms include Liquid Chromatography Mass Spectrometry (LC-MS) and Gas Chromatography Mass Spectrometry (GC-MS). Analysis include volatile organic compounds (odour analysis),pharmacokinetics (bioavailability, bioefficacy),drug development (determining structures of drugs and metabolites),clinical testing (biomarkers discovery and endogenous compounds),genomics (oligonucleotide sequencing) epigenetics (global DNA methylation analysis),environmental research (testing water, soil, food and air quality). | Proteomics, small, molecule, mass, spectrometry, liquid, chromatography, gas, trace, level, biomolecule, sample, quantification, identification, structural, analysis, protein, lipid, metabolite, psesticide, pharmaceutical, volatile, organic, compound, service, core, ABRF | is listed by: ABRF CoreMarketplace | CRICOS ; ABN |
ABRF_837 | https://coremarketplace.org/?FacilityID=837 | SCR_017933 | Proteomics and small molecule mass spectrometry | 2026-08-06 09:29:14 | 0 | |||||||
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Kansas University at Lawrence Computational Chemical Biology Core Facility Resource Report Resource Website |
Kansas University at Lawrence Computational Chemical Biology Core Facility (RRID:SCR_017890) | CCB | service resource, core facility, access service resource | Core provides computational resources and expertise to enhance productivity of researchers studying infectious diseases. Assists with virtual screening, protein-small molecule docking, binding site prediction, protein modeling and design, prediction of protein stability changes upon mutation, fragment based probe design, as well as preparation of presentation graphics.Specializes in initial hit identification of non-traditional drug targets such as protein-protein or protein-RNA interfaces by offering high-throughput virtual screening via pocket optimization with exemplar screening at protein-protein interfaces and hotspot pharmacophore mimicry of protein-RNA interactions.CCB works in collaboration with Molecular Graphics and Modeling Laboratory. | Infectious, disease, virtual, screening, protein, small, molecule, docking, binding, site, prediction, non traditional, drug, target, service, core, ABRF | is listed by: ABRF CoreMarketplace | Restricted | ABRF_761 | SCR_017890 | Computational Chemical Biology Core | 2026-08-06 09:29:13 | 0 | |||||||
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Kansas University Lawrence Biomolecular NMR Laboratory Core Facility Resource Report Resource Website |
Kansas University Lawrence Biomolecular NMR Laboratory Core Facility (RRID:SCR_018671) | service resource, core facility, access service resource | NMR Laboratory maintains two high field NMR spectrometers in support of structural and dynamics studies of biomolecules. Its capabilities include determining high resolution structures, biological macromolecules, elucidation and structural mapping of protein-protein, protein-nucleic acid, protein-peptide, protein-drug interactions, and studies of dynamics of proteins and their complexes in solution. Laboratory staff provide advice,consultation, training,assistance and complete structure elucidation services.Staff is responsible for maintenance, upgrades, implementation of new NMR pulse sequences, and assisting local and remote users with technical problems.Equipped with Bruker Avance 800 MHz NMR instrument fitted with TCI cryoprobe and Bruker Avance III 600 MHz with variety of probes. | USEDit, NMR spectrometer, high resoultion structure, biological macromolecule, structural mapping, protein, nucleic acid, peptide, drug, molecule interaction, consulation, training, ABRF | is listed by: ABRF CoreMarketplace | Open | ABRF_251 | https://coremarketplace.org/?FacilityID=251 | SCR_018671 | Biomolecular NMR Laboratory, Bio-NMR Laboratory, COBRE Biomolecular NMR Laboratory, Kansas University Lawrence Bio-NMR Laboratory | 2026-08-06 09:29:21 | 0 | |||||||
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South Carolina Medical University Mass Spectrometry Core Facility Resource Report Resource Website 1+ mentions |
South Carolina Medical University Mass Spectrometry Core Facility (RRID:SCR_017959) | service resource, core facility, access service resource | Core provides expertise, services, education, and instrumentation to enhance biomedical research through LC-MS/MS-based proteomics. Services are offered for protein identification; characterization of post-translational modifications; and quantitative proteomics to identify differentially expressed/degraded proteins, regulated sites of post-translational modification, protein-protein interactions, and protein targets of drugs identified in phenotypic screens. Analyses include sample preparation, LC-MS/MS, database searching, generation of reports, and assistance with data interpretation. Faculty and staff assist with experimental design and development/optimization of customized methodology for analysis of post-translationally modified peptides (e.g. phosphorylation and O-GlcNAc modification, N- and O-linked glycosylation, Cys modifications including S-glutathionylation, and glycation of Lys and Arg). Quantitative approaches including metabolic labeling (SILAC), isobaric tagging (iTRAQ/TMT), and label free proteomics (LFQ) are performed on Orbitrap Elite or Orbitrap Fusion Lumos Mass Spectrometers. Developes methodology to identify alterations in post-translational modifications that impact signal transduction, transcription, translation, and response to therapeutics with goal of enabling investigators to discover molecular mechanisms underlying disease progression and therapeutic response. | Mass, spectrometry, expertise, service, education, instrumentation, proteomics, protein, identification, characterization, post translational, modification, target, drug, identification, phenotypic, screen, analysis, disease, service, core, ABRF | is listed by: ABRF CoreMarketplace | NIH Office of the Director S10 OD010731; NIGMS P20 GM103542 |
ABRF_985 | SCR_017959 | MUSC Mass Spectrometry Facility | 2026-08-06 09:29:12 | 1 | ||||||||
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Vermont University Proteomics Core Facility Resource Report Resource Website 10+ mentions |
Vermont University Proteomics Core Facility (RRID:SCR_018667) | service resource, core facility, access service resource | Provides central resource of mass spectrometry based proteomics technologies to identify, characterize and quantify target proteins in various biological and biomedical samples. Provides mass spectrometry expertise for analyzing proteins and peptides for proteomics studies, support for data analysis from proteomics measurements, training in proteomics methods, and experimental design. | USEDit, mass spectrometry, proteomics technology, protein, biomedical sample, protein analysis, peptide, measurement, experimental design, ABRF | is listed by: ABRF CoreMarketplace | NIGMS P20 GM103449 | Open | ABRF_44 | https://coremarketplace.org/?FacilityID=44 | https://vgn.uvm.edu/proteomics/ | SCR_018667 | UVM-Proteomics Facility, University of Vermont Proteomics Facility | 2026-08-06 09:29:21 | 11 | |||||
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North Carolina University at Chapel Hill Nanomedicines Characterization Core Facility Resource Report Resource Website |
North Carolina University at Chapel Hill Nanomedicines Characterization Core Facility (RRID:SCR_017951) | service resource, core facility, access service resource | Core provides physicochemical characterization of nanoscale entities. Offers characterization of several classes of nanomaterials:Polymer conjugates,Polymeric micelles,Liposomes,Nanogels,Polyion complexes of small drugs and biomacromolecules (proteins, DNA, and RNA),Inorganic/metal nanoparticles,Bio-derived nanoparticles such as exosomes with protein and nucleic acid cargo. | Physicochemical, characterization, nanoscale, nanomaterial, polymer, conjugate, micelle, liposome, nanogel, polyion, complex, drug, protein, DNA, RNA, inorganic, metal, particle, service, core, ABRF | is listed by: ABRF CoreMarketplace | NCI P30 CA016086 | Open | ABRF_983 | SCR_017951 | Nanomedicines Characterization Core Facility | 2026-08-06 09:29:17 | 0 | |||||||
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South Carolina Medical University Analytical Redox Biology Core Facility Resource Report Resource Website |
South Carolina Medical University Analytical Redox Biology Core Facility (RRID:SCR_017955) | service resource, core facility, access service resource | Core provides analytical redox biochemistry methods and mentoring support for COBRE junior faculty with goal to advance their research endeavors, publications and fundability. Specific aims are:Provide ROS /RNS identification and quantification, Perform quantitative analysis of ROS/RNS. Provides expertise and technology for in depth biochemical analysis of thiol-centered enzyme activities and define protein:protein interactions. | Analytical, redbox, biochemistry, method, mentoring, support, ROS, RNS, identification, quantification, analysis, thiol, centered, enzyme, activity, protein, interaction, service, core, ABRF | is listed by: ABRF CoreMarketplace | ABRF_987 | SCR_017955 | Analytical Redox Biology Core | 2026-08-06 09:29:14 | 0 | |||||||||
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Rutgers Waksman Institute of Microbiology Cell and Cell Products Fermentation Core Facility Resource Report Resource Website |
Rutgers Waksman Institute of Microbiology Cell and Cell Products Fermentation Core Facility (RRID:SCR_018676) | service resource, core facility, access service resource | Provides fermentation services. Produces range of bulk biologics including antimicrobials, cosmetic substrates, flavors/fragrances, biopesticides/bioherbicides and plasmid derived proteins, enzymes, growth factors and diagnostics. Exceptions for pathogenic or opportunistic organisms and mammalian and insect cell lines. Includes Material Preparation Laboratory,Fermentation In-Process/Computer Control,Product Recovery and Analytical Services. | USEDit, fermentation service, antimicrobial, cosmetic substrate, fragrance, biopesticide, bioherbicide, plasmid, protein, enzyme, growth factor, diagnostics, product recovery, analytical service, ABRF, ABRF | is listed by: ABRF CoreMarketplace | Open | ABRF_1002 | https://coremarketplace.org/?FacilityID=1002 | SCR_018676 | Cell and Cell Products Fermentation Facility, Waksman Institute of Microbiology (Busch Campus) | 2026-08-06 09:29:21 | 0 | |||||||
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Louisiana State University Pennington Biomedical Research Center Genomics Core Facility Resource Report Resource Website |
Louisiana State University Pennington Biomedical Research Center Genomics Core Facility (RRID:SCR_018675) | GCF | service resource, core facility, access service resource | Provides services which include Sanger and next-generation DNA sequencing,DNA fragment analysis,qualitative and quantitative analysis of DNA, protein, and RNA samples, quantitative PCR, microarray RNA labeling, hybridization, and scanning robotics,bioinformatics.Individual and small group training and consultation services are offered for sequence analysis, real-time PCR, next-generation sequencing and microarray analysis. | USEDit, Sanger sequencing, next generation DNA sequencing, DNA fragment analysis, quality, quantity, analysis, DNA, protein, RAN, qPCR, microarray RNA labeling, hybridization, scanning robotics, training, ABRF | is listed by: ABRF CoreMarketplace | NIGMS 1P30GM118430; NIDDK 2P30DK072476 |
Open | ABRF_434 | https://coremarketplace.org/?FacilityID=434 | SCR_018675 | Pennington Genomics Core, Pennington Biomedical Research Center Genomics Core | 2026-08-06 09:29:28 | 0 | |||||
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GraphRBF Resource Report Resource Website |
GraphRBF (RRID:SCR_025652) | software application, simulation software, source code, software resource | Software tool as protein-protein/nucleic acid interaction site prediction model built by enhanced graph neural networks and prioritized radial basis function neural networks. Protein-protein and protein-nucleic acid binding site prediction via interpretable hierarchical geometric deep learning. | protein, nucleic acids, interactions, python, binding site prediction, | Free, Available for download, Freely available | SCR_025652 | 2026-08-06 09:30:37 | 0 | |||||||||||
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PathoMAN Resource Report Resource Website |
PathoMAN (RRID:SCR_026552) | PathoMAN | web application, software resource | Web application to automate germline genomic variant curation from clinical sequencing based on ACMG guidelines. Aggregates multiple tracks of genomic, protein and disease specific information from public sources. | Aggregates multiple tracks, automate germline genomic variant curation, clinical sequencing, genomic, protein, disease specific information, public sources, | NCI R21CA029533; NCI P50CA221745; NCI P30CA008748 |
PMID:30787465 | Free, Freely available, | SCR_026552 | Pathogenicity of Mutation Analyzer | 2026-08-06 09:30:46 | 0 | |||||||
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RPISeq Resource Report Resource Website 1+ mentions |
RPISeq (RRID:SCR_027257) | data access protocol, web service, software resource | Web application for RNA-protein interactions prediction. | RNA-protein interactions prediction, RNA, protein, protein sequence, RNA sequence, interaction probability, | Free, Freely available, | SCR_027257 | RNA-Protein Interaction Prediction | 2026-08-06 09:30:54 | 7 | ||||||||||
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Tampa General Hospital-University of South Florida Health Precision Medicine Biorepository Resource Report Resource Website |
Tampa General Hospital-University of South Florida Health Precision Medicine Biorepository (RRID:SCR_027501) | PMBioR | material storage repository, biospecimen repository, storage service resource, service resource | Procures high-quality biologic specimens along with coded clinical and demographic data across broad ethnic, racial, and social demographic of patients. All specimens are systematically collected and processed so that their multi-functional potential for recovering high-quality bioanalytes (including RNA, genomic DNA, protein, enzymes and metabolites) is conserved. All specimens are stored and protected in a database hub to connect researchers conducting variety of scientific projects across multiple medical specialties. Muilti-disciplinary biorepository with capacity for generating specialized bioanalytes. | Muilti-disciplinary biorepository, generating specialized bioanalytes, biologic specimens, coded clinical and demographic data, RNA, genomic DNA, protein, enzymes, metabolites | Restricted | SCR_027501 | TGH-USF Health Precision Medicine Biorepository | 2026-08-06 09:30:57 | 0 |
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