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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
Whole genome sequencing data for 454 unrelated Scripps Wellderly Study participants with European ancestry from a project that is studying the genetic architecture of exceptional healthspan from a cohort comprised of more than 1300 healthy individuals over the age of 80 years. SWGR_v1.0 includes chromosome-specific VCF4.1 bgzipped and tabix indexed files. Annotations for each variant can be found at Scripps Genome ADVISER (SG-ADVISER, http://genomics.scripps.edu/) Additional data releases are expected.
Proper citation: Scripps Wellderly Genome Reference (RRID:SCR_010250) Copy
http://www.scienceexchange.com/facilities/animal-behaviour-laboratory
Exploring the mechanisms responsible for behaviour of clear functional importance.
Proper citation: MQ Animal Behaviour Laboratory (RRID:SCR_011067) Copy
http://udn.epicgames.com/Two/WebHome.html
A free version of the Unreal Engine 2.0, a powerful and flexible game engine and toolset to create games that run on previous generation hardware configurations and platforms, for non-commercial use. Epic have also released a non-free version of the Runtime that gives licenses access to the native code headers and some limited commercial distribution rights.
Proper citation: UnrealEngine2 Runtime Software (RRID:SCR_010254) Copy
The Centre manages substantial instrumentation resources appropriate for the contemporary study of biomolecules and natural products.
Proper citation: Macquarie University Centre for Analytical Biotechnology (RRID:SCR_011060) Copy
http://ftp://ftp.ebi.ac.uk/pub/databases/pombase/pombe/Protein_data/
FTP site to access Schizosaccharomyces pombe protein data.
Proper citation: Pompep (RRID:SCR_010536) Copy
Operating since August 2004, Seawater Facility supports academic research and undergraduate teaching in Division of Environmental Life Sciences. Facility is used by marine scientists at Macquarie and their collaborative partners, to conduct controlled experiments and to temporarily house marine specimens.
Proper citation: Macquarie University Seawater Core Facility (RRID:SCR_011074) Copy
http://www.scienceexchange.com/facilities/osl-laboratory
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 2,2024. Core facility
Proper citation: MQ OSL Laboratory (RRID:SCR_011078) Copy
http://www.scienceexchange.com/facilities/mq-biofocus-research-centre
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 16,2024. We develop and apply new analytical, microscopic, molecular, multiplexed, cellular, tomographic and related technologies for biomedical diagnosis, suitable for live cells or tissues or whole body. These will enable significantly increased sensitivity, resolution, speed, accuracy, penetration, and photostability , combined with reduced toxicity and risks to health.
Proper citation: MQ BioFocus Research Centre (RRID:SCR_011072) Copy
http://www.scienceexchange.com/facilities/usc-flow-cytometry-core-usc
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 15,2024. USC Flow Cytometry Core Facility offers our extended research community with the technology to selectively analyze and sort specific populations of cells up to Biosafety Level 2 (BSL-2). The USC Flow Core maintains the following devices: Two analytic cytometers (LSR II, CyAn) Two cell sorting cytometers (Aria I, Aria II) One plate imaging system (Cellomics) Available laser lines include: UV (355nm) Violet (405nm) Blue (488nm) Red (633nm) *Both Aria I/II cell sorters are contained in state of the art BioSero Class II Type B Biosafety Cabinets. The USC Flow Cytometry Core has been used by prominent scientists in Southern California to address questions in adult and embryonic stem cell research, regenerative medicine, cellular immunology, cell biology, chemical carcinogenesis, radiology, human tumor cell cycle kinetics, drug efficacy trials, and in characterizing the differences between blood samples between patients and healthy donors. Cell Sorting & Analysis: Monday through Friday 10am - 8pm Consultations: Monday through Friday 11am - 4pm
Proper citation: USC Flow Cytometry Core (RRID:SCR_010985) Copy
http://www.scienceexchange.com/facilities/genomics-core-facility-wvu
Performs and runs sequencing reactions and fragment analysis on an ABI model 3130XL genetic analyzer, as well as microarray analysis using the Affymetrix GeneChip system. They also have equipment available for self-service use.
Proper citation: WVU Genomics Core Facility (RRID:SCR_011044) Copy
http://www.ucm.es/centros/webs/en/
Proper citation: Complutense University of Madrid; Madrid; Spain (RRID:SCR_011166) Copy
http://www.labmedmolge.unisa.it/inglese/index
Core equipped for structural and functional studies of genomes, includes equipment for next generation sequencing applications (Illumina HiSeq 1500, GAIIx and MiSeq, Life Technologies Ion Torrent PGM), RNA and microRNA expression profiling, array-based DNA methylation analyses and SNP genotyping (Illumina HiScan and Agilent High Resolution microarray scanners), informatics and bioinformatics (a server farm for genomics data computation and a high capacity data storage unit), fluorescence and confocal microscopy, long-term sample storage, cell culture, including a facility for generation and handling of viral vectors for gene transfer and gene therapy, access to a small animal facility for ''in vivo'' experimentations. Trained biotechnologists, molecular biologists and bioinformaticians handle all aspects related to experimental design, technical implementation and data analysis and storage.
Proper citation: University of Salerno Laboratory of Molecular Medicine and Genomics (RRID:SCR_011047) Copy
http://www.scienceexchange.com/facilities/enhanced-neuroimaging-core-harvard
Core facility that provides access to advanced confocal, multi-photon and wide field microscopy and provides the following services: ImageJ Image Analysis Service. The facility specializes in various forms of fluorescence, brightfield, DIC (Differential Interference Contrast) and live cell imaging. They offer users comprehensive training (data acquisition and image analysis), assistance in the design of experimental protocols and imaging analysis service. Questions regarding cell and tissue fixation techniques, fluorophore selection and immunostaining principles are always welcome, as are requests for instruction in live cell and tissue imaging. They offer flexible and customized training and support to both established and new users throughout the NeuroDiscovery community.
Proper citation: HNDC Enhanced NeuroImaging Core (RRID:SCR_010993) Copy
Core laboratory for nucleic acid sequencing and bioinformatics. Used for research support, education, and training. Services include genomic techniques and applications, sequencing technologies, and bioinformatics analyses, writting letters of support for grant applications submitted to funding agencies. GGBC operates multiple platforms for short-, long-, and single-molecule sequencing reads (i.e., Illumina MiSeq and NextSeq, PacBio Sequel, and Oxford Nanopore MinIon).
Proper citation: Georgia Genomics and Bioinformatics Core at the University of Georgia (RRID:SCR_010994) Copy
http://www.scienceexchange.com/facilities/clas-goldwater-environmental-laboratory-gel-asu
A shared-use facility available to all research staff, faculty, and students of all disciplines. The facility encompasses seven laboratories and is part of the College of Liberal Arts and Sciences Research Technical Services group. GEL staff are committed to providing the tools necessary to meet the analytical needs of researchers while creating a valuable educational experience for users. Although most users perfer to receive individualized hands-on training enabling them to perform their own analyses, complete analytical services are also available.
Proper citation: ASU CLAS Goldwater Environmental Laboratory (RRID:SCR_011049) Copy
The Transgenic Mouse Facility (TMF) is a core facility that provides services on a recharge basis for making, breeding, genotyping, importing, and preserving genetically-modified mice and embryonic stem cells. Advice is currently provided at no charge.
Proper citation: UC Irvine Transgenic Mouse Facility (RRID:SCR_010995) Copy
https://www.sri.cornell.edu/sri/
Provides survey research, data collection, and analysis services to academic, non-profit, governmental, and corporate clientele. With facility located at Cornell University, SRI possesses extensive capabilities for telephone, mail and web survey data collection. Conducts national and state studies on subjects as the long-term effects of the New York City school-based intervention study on risky behavior among young adults, assessment of prevalence of elder abuse in New York State, the effects of retirement on drinking behavior, health and safety issues of New York City firefighters, business climate assessment for the Division of the Budget of New York State, major trends in the telecommunication industry, rising tuition at universities, how people cope with aging and careers, and topical issues such as support for civil liberties and the war in Iraq. SRI has conducted over 1000 projects to date.
Proper citation: Survey Research Institute (RRID:SCR_010997) Copy
http://www.scienceexchange.com/facilities/comparative-pathology-laboratory-uga
The Comparative Pathology Laboratory (CPL) is a service laboratory dedicated to serve the biomedical research community by providing preclinical, R&D, and discovery pathology services. The laboratory is headed by an ACVP (American College of Veterinary Pathologists) board-certified laboratory animal pathologist and its staff has expertise in both small and large laboratory animal pathology.
Proper citation: UGA Comparative Pathology Laboratory (RRID:SCR_010998) Copy
http://fcon_1000.projects.nitrc.org/indi/retro/cobre.html
Data set of raw anatomical and functional MR data from 72 patients with Schizophrenia and 75 healthy controls (ages ranging from 18 to 65 in each group). All subjects were screened and excluded if they had: history of neurological disorder, history of mental retardation, history of severe head trauma with more than 5 minutes loss of consciousness, history of substance abuse or dependence within the last 12 months. Diagnostic information was collected using the Structured Clinical Interview used for DSM Disorders (SCID). A multi-echo MPRAGE (MEMPR) sequence was used with the following parameters: TR/TE/TI = 2530/(1.64, 3.5, 5.36, 7.22, 9.08)/900 ms, flip angle = 7��, FOV = 256x256 mm, Slab thickness = 176 mm, Matrix = 256x256x176, Voxel size =1x1x1 mm, Number of echos = 5, Pixel bandwidth =650 Hz, Total scan time = 6 min. With 5 echoes, the TR, TI and time to encode partitions for the MEMPR are similar to that of a conventional MPRAGE, resulting in similar GM/WM/CSF contrast. Rest data was collected with single-shot full k-space echo-planar imaging (EPI) with ramp sampling correction using the intercomissural line (AC-PC) as a reference (TR: 2 s, TE: 29 ms, matrix size: 64x64, 32 slices, voxel size: 3x3x4 mm3). Slice Acquisition Order: Rest scan - collected in the Axial plane - series ascending - multi slice mode - interleaved MPRAGE - collected in the Sag plane - series interleaved - multi slice mode - single shot The following data are released for every participant: * Resting fMRI * Anatomical MRI * Phenotypic data for every participant including: gender, age, handedness and diagnostic information.
Proper citation: COBRE (RRID:SCR_010482) Copy
Data set of annual questionnaires of a long-term prospective study of 1,337 former Johns Hopkins University medical students to identify precursors of premature cardiovascular disease and hypertension. The purpose of the study has broadened, however, as the cohort has aged. The study has been funded for 15 years. Participants were an average of 22 years of age at entry and have been followed to an average age of 69 years. Data are collected through annual questionnaires, supplemented with phone calls and substudies. Self-reports of diseases and risk factors have been validated. Every year from 1988 to 2003, anywhere from 2 to 6 questionnaires have been administered, in categories such as the following, which repeat periodically: Morbidity, Supplemental Illness, Health Behavior, Family and Career, Retirement, Job Satisfaction, Blood Pressure and Weight, Medications, Work Environment, Social Network, Diabetes, Osteoarthritis, Health Locus of Control, Preventive Health Services, General Health, Functional Limitations, Memory Functioning, Smoking, Religious Beliefs and Practices, Links with Administrative Data, National Death Index searches for all nonrespondents * Dates of Study: 1946-2003 * Study Features: Longitudinal * Sample Size: 1,337 (1946)
Proper citation: Precursors of Premature Disease and Death (RRID:SCR_010483) Copy
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