Searching the RRID Resource Information Network

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes

Preparing word cloud

×

SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

Search

Type in a keyword to search

Filter by records added date
See new records

Options


Current Facets and Filters

  • Related Resources:debian (facet)

Facets


Recent searches

Snippet view Table view
Click the to add this resource to a Collection

2,279 Results - per page

Show More Columns | Download Top 1000 Results

Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
imDEV
 
Resource Report
Resource Website
1+ mentions
imDEV (RRID:SCR_014674) software application, systems interoperability software, software resource A software application of RExcel that integrates R into Excel as an embedded additon for omics tasks and analysis. It can be used specifically for tasks concerning multivariate data visualization, exploration, and analysis. imDev has interactive modules for dimensional reduction, prediction, feature selection, analysis of correlation, and generation of networked structures, all of which provide an integrated environment for systems level analysis of multivariate data. statistical analysis, statistical analysis package, r, r package, excel, data visualization, feature selection, omics, systems interoperability, software, metabolomics, bio.tools is listed by: Metabolomics Workbench
is listed by: Debian
is listed by: bio.tools
DOI:10.1093/bioinformatics/bts439 Supports Microsoft Excel versions 2003-2010 biotools:imdev https://sourceforge.net/projects/imdev/, https://bio.tools/imdev SCR_014674 Interactive modules for Data Exploration and Visualization, Interactive modules for Data Exploration and Visualization (imDEV) 2026-08-05 10:46:11 8
rampler
 
Resource Report
Resource Website
rampler (RRID:SCR_024207) standalone software, software application, software resource Standalone software for sampling genomic sequences.Supports two modes, random subsampling of sequencing data to desired depth and file splitting to desired size in bytes. sampling genomic sequences, is listed by: Debian Free, Available for download, Freely available, OMICS_33016 https://sources.debian.org/src/rampler/ SCR_024207 2026-08-05 10:48:00 0
Gemma
 
Resource Report
Resource Website
1000+ mentions
Gemma (RRID:SCR_008007) Gemma data or information resource, database Resource for reuse, sharing and meta-analysis of expression profiling data. Database and set of tools for meta analysis, reuse and sharing of genomics data. Targeted at analysis of gene expression profiles. Users can search, access and visualize coexpression and differential expression results. chip, microarray, functional genomics, gene expression, coexpression, differential expression, FASEB list is used by: NIF Data Federation
is used by: Integrated Data Annotation
is listed by: Debian
is listed by: SoftCite
is related to: Gene Ontology
is related to: Gene Expression Omnibus
is related to: Phenocarta
has parent organization: University of British Columbia; British Columbia; Canada
is parent organization of: Neurocarta
NIGMS GM076990;
Canadian Foundation for Innovation ;
Michael Smith Foundation for Health Research ;
Canadian Institutes for Health Research
PMID:22782548 Free, Freely available nif-0000-08127, r3d100012747 https://sources.debian.org/src/gemma/, https://doi.org/10.17616/R36R54, https://doi.org/10.17616/R36R54 SCR_008007 2026-08-05 10:44:53 1112
TAndem Splice Site DataBase
 
Resource Report
Resource Website
1+ mentions
TAndem Splice Site DataBase (RRID:SCR_007961) data or information resource, database TassDB stores extensive data about alternative splice events at GYNGYN donors and NAGNAG acceptors. Currently, 114,554 tandem splice sites of eight species are contained in the database, 5,209 of which have EST/mRNA evidence for alternative splicing. Users can search by Transcript Accession Number and Gene Symbol, SQL Query, and Tandem Donor/Tandem Acceptor pairs. bio.tools is listed by: bio.tools
is listed by: Debian
nif-0000-03536, biotools:tassdb https://bio.tools/tassdb http://helios.informatik.uni-freiburg.de/TassDB/ SCR_007961 TassDB 2026-08-05 10:44:51 5
SISYPHUS
 
Resource Report
Resource Website
1+ mentions
SISYPHUS (RRID:SCR_007930) data or information resource, database THIS RESOURCE IS NO LONGER IN SERVICE, documented on July 15, 2013. A collection of manually curated protein structural alignments and their interrelationships. Each multiple alignment within the SISYPHUS database consists of structurally similar regions common to a group of proteins. These regions range from oligomeric biological units, or individual domains to fragments of different size representing either internal structural repeats or motifs common to structurally distinct proteins. The SISYPHUS multiple alignments are displayed with SPICE, a browser that provides an integrated view of protein sequences, structures and their annotations. bio.tools is listed by: bio.tools
is listed by: Debian
THIS RESOURCE IS NO LONGER IN SERVICE biotools:sisyphus https://bio.tools/sisyphus SCR_007930 SISYPHUS 2026-08-05 10:44:51 3
SilkDB
 
Resource Report
Resource Website
100+ mentions
SilkDB (RRID:SCR_007926) data or information resource, database THIS RESOURCE IS NO LONGER IN SERVICE, documented May 10, 2017. A pilot effort that has developed a centralized, web-based biospecimen locator that presents biospecimens collected and stored at participating Arizona hospitals and biospecimen banks, which are available for acquisition and use by researchers. Researchers may use this site to browse, search and request biospecimens to use in qualified studies. The development of the ABL was guided by the Arizona Biospecimen Consortium (ABC), a consortium of hospitals and medical centers in the Phoenix area, and is now being piloted by this Consortium under the direction of ABRC. You may browse by type (cells, fluid, molecular, tissue) or disease. Common data elements decided by the ABC Standards Committee, based on data elements on the National Cancer Institute''s (NCI''s) Common Biorepository Model (CBM), are displayed. These describe the minimum set of data elements that the NCI determined were most important for a researcher to see about a biospecimen. The ABL currently does not display information on whether or not clinical data is available to accompany the biospecimens. However, a requester has the ability to solicit clinical data in the request. Once a request is approved, the biospecimen provider will contact the requester to discuss the request (and the requester''s questions) before finalizing the invoice and shipment. The ABL is available to the public to browse. In order to request biospecimens from the ABL, the researcher will be required to submit the requested required information. Upon submission of the information, shipment of the requested biospecimen(s) will be dependent on the scientific and institutional review approval. Account required. Registration is open to everyone.. Documented on August 20,2019.A database of integrated genome resources for the silkworm, Bombyx mori. This database provides access to not only genomic data including functional annotation of genes, gene products and chromosomal mapping, but also extensive biological information such as microarray expression data, ESTs and corresponding references. SilkDB will be useful for the silkworm research community as well as comparative genomics. Recently, an international collaboration has been launched to assemble a complete silkworm genome sequence, which is based on the 6� and 3� draft genome sequences created by Chinese group and Japanese group in 2004 (Mita et al., 2004; Xia et al., 2004), respectively. The genome assembly quality has been greatly improved. Base on a high density SNP genetic map, over 80% of genome sequence could be mapped on 28 chromosomes of the silkworm. The first version of SilkDB was released in 2004. Since that time, the silkworm has become a focus in insect research community and the study of silkworm has been greatly accelerated. Now, we are happy to announce the release of a new version of SilkDB, which updated all of the data, added new information of genome sequence and genes, and provides new tools to facilitate use of the genome database. bio.tools is listed by: bio.tools
is listed by: Debian
has parent organization: Southwest University; Chongqing; China
THIS RESOURCE IS NO LONGER IN SERVICE r3d100012187, biotools:silkdb https://bio.tools/silkdb, https://doi.org/10.17616/R3435Z, https://doi.org/10.17616/R3435Z SCR_007926 SilkDB 2026-08-05 10:44:50 159
Transterm
 
Resource Report
Resource Website
10+ mentions
Transterm (RRID:SCR_008244) data or information resource, database Database that provides access to mRNA sequences and associated regulatory elements that were processed from Genbank. These mRNA sequences include complete genomes, which are divided into 5-prime UTRs, 3-prime UTRs, initiation sequences, termination regions and full CDS sequences. This data can be searched for a range of properties including specific mRNA sequences, mRNA motifs, codon usage, RSCU values, information content, etc. element, gene, 3' utr, 5' utr, codon, genome, genomic, initiation, motif, mrna, nucleotide sequences, transcriptional regulator sites, transcription factors databases, region, regulatory, rna sequence, species, termination is listed by: Debian
is listed by: OMICtools
has parent organization: University of Otago; Dunedin; New Zealand
DOI:10.1186/gb-2007-8-2-r22 Public nif-0000-21399, OMICS_06165 https://sources.debian.org/src/transtermhp/ http://uther.otago.ac.nz/Transterm.html SCR_008244 2026-08-05 10:44:57 17
Athena
 
Resource Report
Resource Website
100+ mentions
Athena (RRID:SCR_008110) data or information resource, database Athena is a web-based application that warehouses disparate datatypes related to the control of gene expression. Athena provides several features to enable exploration of the regulatory mechanisms of Arabidopsis gene control. The first main tool we provide is visualization of promoter domains of selected genes. Database crossreference for these transcription factors is provided as well as a statistical test for enrichment of binding activity within the set of selected promoters. The data mining tools in Athena allow for selection of sets of genes based on two different factors. -Genes can be select by specifying a set of binding factors whose putative sites must be present within all of those genes'' promoter regions. -Alternatively, genes can be selected using Gene Ontology annotations. Both GO (Gene Ontology) Slim terms and Gene Ontology terms are available. One can select a set of genes by either choosing a union of the genes annotated by a selected set of Slim terms or Gene Ontology terms. The selected gene''s putative binding factors are listed, including enrichment data. Furthermore, enriched presence of Gene Ontology terms is given. The analysis suite provides both enhanced data mining tools for selecting genes as well as several data displays., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. gene control, gene expression, arabidopsis, binding factor, regulatory mechanism, ontology, bio.tools, FASEB list is listed by: bio.tools
is listed by: Debian
has parent organization: Washington State University; Washington; USA
THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-20815, biotools:Athena https://bio.tools/Athena SCR_008110 Athena 2026-08-05 10:44:55 495
LitMiner
 
Resource Report
Resource Website
1+ mentions
LitMiner (RRID:SCR_008200) data or information resource, database THIS RESOURCE IS NO LONGER IN SERVICE, documented August 23, 2016. The LitMiner software is a literature data-mining tool that facilitates the identification of major gene regulation key players related to a user-defined field of interest in PubMed abstracts. The prediction of gene-regulatory relationships is based on co-occurrence analysis of key terms within the abstracts. LitMiner predicts relationships between key terms from the biomedical domain in four categories (genes, chemical compounds, diseases and tissues). The usefulness of the LitMiner system has been demonstrated recently in a study that reconstructed disease-related regulatory networks by promoter modeling that was initiated by a LitMiner generated primary gene list. To overcome the limitations and to verify and improve the data, we developed WikiGene, a Wiki-based curation tool that allows revision of the data by expert users over the Internet. It is based on the annotation of key terms in article abstracts followed by statistical co-citation analysis of annotated key terms in order to predict relationships. Key terms belonging to four different categories are used for the annotation process: -Genes: Names of genes and gene products. Gene name recognition is based on Ensembl . Synonyms and aliases are resolved. -Chemical Compounds: Names of chemical compounds and their respective aliases. -Diseases and Phenotypes: Names of diseases and phenotypes -Tissues and Organs: Names of tissues and organs LitMiner uses a database of disease and phenotype terms for literature annotation. Currently, there are 2225 diseases or phenotypes, 801 tissues and organs, and 10477 compounds in the database. gene, biomedical, chemical, compound, disease, identification, literature, medline interfaces, mining, modeling, phenotype, promoter, regulation, regulatory, relationship, tissue, tool, bio.tools is listed by: bio.tools
is listed by: Debian
THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-21241, biotools:litminer https://bio.tools/litminer SCR_008200 LitMiner 2026-08-05 10:44:57 2
DNAtraffic
 
Resource Report
Resource Website
DNAtraffic (RRID:SCR_008886) DNAtraffic data or information resource, database DNAtraffic database is dedicated to be an unique comprehensive and richly annotated database of genome dynamics during the cell life. DNAtraffic contains extensive data on the nomenclature, ontology, structure and function of proteins related to control of the DNA integrity mechanisms such as chromatin remodeling, DNA repair and damage response pathways from eight model organisms commonly used in the DNA-related study: Homo sapiens, Mus musculus, Drosophila melanogaster, Caenorhabditis elegans, Saccharomyces cerevisiae, Schizosaccharomyces pombe, Escherichia coli and Arabidopsis thaliana. DNAtraffic contains comprehensive information on diseases related to the assembled human proteins. Database is richly annotated in the systemic information on the nomenclature, chemistry and structure of the DNA damage and drugs targeting nucleic acids and/or proteins involved in the maintenance of genome stability. One of the DNAtraffic database aim is to create the first platform of the combinatorial complexity of DNA metabolism pathway analysis. Database includes illustrations of pathway, damage, protein and drug. Since DNAtraffic is designed to cover a broad spectrum of scientific disciplines it has to be extensively linked to numerous external data sources. Database represents the result of the manual annotation work aimed at making the DNAtraffic database much more useful for a wide range of systems biology applications. DNAtraffic database is freely available and can be queried by the name of DNA network process, DNA damage, protein, disease, and drug. dna, cell cycle, genome, nomenclature, ontology, structure, function, protein, chromatin remodeling, dna repair, damage response pathway, pathway, damage, drug, annotation, disease, dna network process, dna damage, gene sequence, bio.tools is listed by: Debian
is listed by: bio.tools
has parent organization: Polish Academy of Sciences Warsaw; Warsaw; Poland
Norwegian Financial Mechanism PNRF-143-AI-1/07;
Polish Ministry of Science and Higher Education N N301 165835
PMID:22110027 Free biotools:dnatraffic, nlx_151312 https://bio.tools/dnatraffic SCR_008886 DNAtraffic database 2026-08-05 10:45:05 0
Homologous Sequences in Ensembl Animal Genomes
 
Resource Report
Resource Website
1+ mentions
Homologous Sequences in Ensembl Animal Genomes (RRID:SCR_008356) HOMOLENS data or information resource, database Database of homologous genes from Ensembl organisms, structured under ACNUC sequence database management system. It allows to select sets of homologous genes among species, and to visualize multiple alignments and phylogenetic trees. It is possible to search for orthologous genes in a wide range of taxons. HOMOLENS is particularly useful for comparative sequence analysis, phylogeny and molecular evolution studies. More generally, HOMOLENS gives an overall view of what is known about a peculiar gene family. Note that HOMOLENS is split into two databases on this server: HOMOLENS contains the protein sequences while HOMOLENSDNA contains the nucleotide sequences. Protein sequences of HOMOLENS have been generated by translating the CDS of HOMOLENSDNA and using associated cross-references to generate the annotations. ensembl, evolution, gene, alignment, comparative, homologous, molecular, nucleotide, organism, phylogenetic, phylogeny, protein, sequence, specie, structure, taxon, bio.tools is listed by: bio.tools
is listed by: Debian
has parent organization: Claude Bernard University Lyon 1; Lyon; France
biotools:homolens, nif-0000-25424 https://bio.tools/homolens SCR_008356 2026-08-05 10:45:00 3
Regulatory Sequence Analysis Tools
 
Resource Report
Resource Website
100+ mentions
Regulatory Sequence Analysis Tools (RRID:SCR_008560) data or information resource, database THIS RESOURCE IS NO LONGER IN SERVICE. Documented on February 28,2023. Retrieve-ensembl-seq is included in the software suite regulatory sequence analysis tools (RSAT), allowing instant submission of retrieved sequences to further analysis tools. AVAILABILITY: retrieve-ensembl-seq is integrated in the RSAT suite: http://rsat.ulb.ac.be/rsat. Web site: http://rsat.ulb.ac.be/rsat/retrieve-ensembl-seq_form.cgi. Web services: http://rsat.ulb.ac.be/rsat/web_services/RSATWS.wsdl. Stand-alone distribution: freely available under an academic licence to download from the RSAT web site. The complete manual, a convenient tutorial and demos are available from the RSAT website. Additional help can be found on the RSAT public forum. bio.tools, FASEB list is listed by: Debian
is listed by: bio.tools
is related to: Yeast Search for Transcriptional Regulators And Consensus Tracking
DOI:10.1093/nar/gkv362 THIS RESOURCE IS NO LONGER IN SERVICE biotools:rsat, nif-0000-31437, OMICS_08097 https://bio.tools/rsat https://sources.debian.org/src/rsat/ SCR_008560 RSAT 2026-08-05 10:45:03 107
Single Nucleotide Polymorphism Spectral Decomposition (SNPSpD)
 
Resource Report
Resource Website
10+ mentions
Single Nucleotide Polymorphism Spectral Decomposition (SNPSpD) (RRID:SCR_008621) SNPSpD data analysis service, production service resource, service resource, analysis service resource SNPSpD is a method of correcting for non-independance of single nucleotide polymorphisms (SNPs) in linkage disequilibrium (LD) with each other, on the basis of the spectral decomposition (SpD) of matrices of LD between SNP''s. Additionally, output from SNPSpD includes eigenvalues, principal-component coefficients, and factor loadings after varimax rotation, enabling the selection of a subset of SNPs that optimize the information in a genomic region. bio.tools is listed by: Debian
is listed by: bio.tools
has parent organization: Queensland Institute of Medical Research
National Health and MRC Australia 241916 PMID:14997420 biotools:snpspd, nif-0000-31985 https://bio.tools/snpspd http://genepi.qimr.edu.au/general/daleN/SNPSp SCR_008621 Single Nucleotide Polymorphism Spectral Decomposition 2026-08-05 10:45:03 18
Webproanalyst
 
Resource Report
Resource Website
Webproanalyst (RRID:SCR_008348) data analysis service, production service resource, service resource, analysis service resource WebProAnalyst provides web-accessible analysis for scanning the quantitative structure-activity relationships in protein families. It searches for a sequence region, whose substitutions are correlated with variations in the activities of a homologous protein set, the so-called activity modulating sites. WebProAnalyst allows users to search for the key physicochemical characteristics of the sites that affect the changes in protein activities. It enables the building of multiple linear regression and neural networks models that relate these characteristics to protein activities. WebProAnalyst implements multiple linear regression analysis, back propagation neural networks and the Structure-Activity Correlation/Determination Coefficient (SACC/SADC). A back propagation neural network is implemented as a two-layered network, one layer as input, the other as output (Rumelhart et al, 1986). WebProAnalyst uses alignment of amino acid sequences and data on protein activity (pK, Km, ED50, among others). The input data are the numerical values for the physicochemical characteristics of a site in the multiple alignment given by a slide window. The output data are the predicted activity values. The current version of WebProAnalyst handles a single activity for a single protein. The SACC/SADC may be defined as an estimate of the strongest multiple correlation between the physicochemical characteristics of a site in a multiple alignment and protein activities. The SACC/SADC coefficient makes possible the calculation of the possible highest correlation achievable for the quantitative relationship between the physicochemical properties of sites and protein activities. The SACC/SADC is a convenient means for an arrangement of positions by their functional significance. WebProAnalyst outputs a list of multiple alignment positions, the respective correlation values, also regression analysis parameters for the relationships between the amino acid physicochemical characteristics at these positions and the protein activity values. family, functional, activity, alignment, amino acid, homologous, modulating site, neural, physicochemical, propagation, protein, quantitative, region, relationship, scan, sequence, structure, substitution, variation, bio.tools is listed by: bio.tools
is listed by: Debian
nif-0000-25212, biotools:webproanalyst https://bio.tools/webproanalyst SCR_008348 Webproanalyst 2026-08-05 10:45:00 0
GeneSeeker
 
Resource Report
Resource Website
1+ mentions
GeneSeeker (RRID:SCR_008347) data or information resource, database The GeneSeeker allows you to search across different databases simultaneously, given a known human genetic location and expression/phenotypic pattern. The GeneSeeker returns any found gene names which are located on the specified location and expressed in the specified tissue. To search for more expression location in one search, just enter them in the textbox for the expression location and separate them with logical operators (and, or, not). You can specify as many tissues as you want, the program starts 20 queries simultaneously, and then waits for a query to finish before starting another query, to keep server loads to a minimum. You can also search only for expression, just leave the cytogenetic location fields blank, and do the query. If you only want to look for one cytogenetic location, only fill in the first location field, and the GeneSeeker will search with only this one. Housekeeping genes , found in Swissprot can be excluded, or genes that are to be excluded can be specified. Human chromosome localizations are translated with an oxford-grid to mouse chromosome localizations, and then submitted to the Mgd. Sponsors: GeneSeeker is a service provided by the Centre for Molecular and Biomolecular Informatics (CMBI). expression, federated database, gene, genetic, biomolecular, chromosome, cytogenetic, database, human, localization, location, molecular, pattern, phenotypic, tissue, bio.tools is listed by: bio.tools
is listed by: Debian
has parent organization: Radboud University; Nijmegen; The Netherlands
biotools:geneseeker, nif-0000-25211 https://bio.tools/geneseeker SCR_008347 GeneSeeker 2026-08-05 10:44:59 5
NEBcutter
 
Resource Report
Resource Website
100+ mentions
NEBcutter (RRID:SCR_010664) data analysis service, production service resource, service resource, analysis service resource This tool will take a DNA sequence and find the large, non-overlapping open reading frames using the E.coli genetic code and the sites for all Type II and commercially available Type III restriction enzymes that cut the sequence just once. By default, only enzymes available from NEB are used, but other sets may be chosen. Just enter your sequence and submit. Further options will appear with the output. The maximum size of the input file is 1 MByte, and the maximum sequence length is 300 KBases. NEBcutter produces a variety of outputs including restriction enzyme maps, theoretical digests and links into the restriction enzyme database, REBASE (http://rebase.neb.com/rebase/rebase.html). Importantly, its table of recognition sites is updated daily from REBASE and it marks all sites that are potentially affected by DNA methylation (Dam, Dcm, etc.). Many options exist to choose the enzymes used for digestion, including all known specificities, subsets of those that are commercially available or sets of enzymes that produce compatible termini. bio.tools, FASEB list is listed by: Debian
is listed by: bio.tools
has parent organization: New England Biolabs
PMID:12824395 biotools:nebcutter, nlx_71778 https://bio.tools/nebcutter SCR_010664 2026-08-05 10:45:26 142
MutationTaster
 
Resource Report
Resource Website
1000+ mentions
MutationTaster (RRID:SCR_010777) MutationTaster data analysis service, production service resource, service resource, analysis service resource Evaluates disease-causing potential of sequence alterations. bio.tools is listed by: OMICtools
is listed by: Debian
is listed by: bio.tools
is listed by: SoftCite
PMID:20676075 Acknowledgement requested biotools:mutation_taster, OMICS_00153 https://bio.tools/mutation_taster SCR_010777 2026-08-05 10:45:27 4180
SPIKE
 
Resource Report
Resource Website
100+ mentions
SPIKE (RRID:SCR_010466) SPIKE data or information resource, service resource, database Database of curated human signaling pathways with an associated interactive software tool for analysis and dynamic visualization of pathways. Individual pathway maps can be viewed and downloaded; the entire database may be browsed, or launched via a map viewer tool that allows dynamic visualization of the database and save networks in XGMML format that can be viewed in all generic XGMML viewers. Map Topics * Cell cycle progress and check points * DNA damage response * Programmed cell death related processes * Stress-activated transcription factors * Mitogen-activated protein kinase pathways * Immune response signaling * HEarSpike: hearing related pathways visualization, analysis, cellular, signaling pathway, regulatory network, function, genomic, proteomic, cell cycle, dna damage, cell death, stress, transcription factor, mitogen, protein kinase, pathway, immune response, signaling, hearing, dna damage response, programmed cell death, development, ear, bio.tools, FASEB list is listed by: bio.tools
is listed by: Debian
is related to: ConsensusPathDB
has parent organization: Tel Aviv University; Ramat Aviv; Israel
Cancer A-T Children's Project ;
Wolfson Foundation ;
European Union FP7 ;
Israel Science Foundation
PMID:21097778
PMID:18289391
biotools:spike, nlx_157705 https://bio.tools/spike SCR_010466 Signaling Pathway Integrated Knowledge Engine 2026-08-05 10:45:24 128
FINDbase Worldwide
 
Resource Report
Resource Website
10+ mentions
FINDbase Worldwide (RRID:SCR_012744) data or information resource, database FINDbase Worldwide is an online repository of information about the frequency of different mutations leading to inherited disorders in various populations around the globe. Frequency data about 32 disorders, 25 genes within 98 populations covering 1226 mutations is now available. 28 curators worldwide contributed to this database containing data from 37 submissions. genetic disorder, human mutation, inherited disorder, mutation pathogenesis, bio.tools is listed by: bio.tools
is listed by: Debian
biotools:findbase, nif-0000-02838 https://bio.tools/findbase SCR_012744 FINDbase 2026-08-05 10:45:52 13
CancerResource
 
Resource Report
Resource Website
1+ mentions
CancerResource (RRID:SCR_011945) data or information resource, database Comprehensive database of cancer relevant proteins and compound interactions supported by experimental knowledge.Knowledgebase for drug-target relationships related to cancer as well as for supporting information or experimental data. compound, drug, target gene, cancer relevant proteins, compound interactions, drug-target relationships, bio.tools is listed by: OMICtools
is listed by: Debian
is listed by: bio.tools
Cancer International Research Training Group IRTG ;
DFG ;
Federal Ministry of Education and Research BMBF ;
European Union
PMID:20952398 Free, Freely available biotools:cancerresource, OMICS_01576 https://bio.tools/cancerresource http://bioinf-data.charite.de/cancerresource/index.php?site=home SCR_011945 2026-08-05 10:45:38 5

Can't find your Tool?

We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.

Can't find the RRID you're searching for? X
X
  1. RRID Portal Resources

    Welcome to the RRID Resources search. From here you can search through a compilation of resources used by RRID and see how data is organized within our community.

  2. Navigation

    You are currently on the Community Resources tab looking through categories and sources that RRID has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.

  3. Logging in and Registering

    If you have an account on RRID then you can log in from here to get additional features in RRID such as Collections, Saved Searches, and managing Resources.

  4. Searching

    Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:

    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into RRID you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.