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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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University of Louisville Labs and Facilities Resource Report Resource Website |
University of Louisville Labs and Facilities (RRID:SCR_012192) | UL Labs and Facilities, UL Labs & Facilities | service resource, access service resource, core facility | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on October 30,2023. Portal, Core facility |
is listed by: ScienceExchange is related to: University of Louisville Micro/Nano Technology Center has parent organization: University of Louisville; Kentucky; USA |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_10356 | SCR_012192 | University of Louisville Labs & Facilities | 2026-08-15 11:31:17 | 0 | ||||||||
|
SeqMatic Resource Report Resource Website 50+ mentions |
SeqMatic (RRID:SCR_012194) | SeqMatic | service resource, commercial organization | SeqMatic provides comprehensive next generation sequencing services for DNA, RNA, and miRNA sequencing. We are proud to offer high quality sequencing with very fast turnaround time. We also offer customized experiment solutions including library generation, sequencing, and data analysis tailored to each customer''s needs. | is listed by: ScienceExchange | SciEx_11420 | http://www.scienceexchange.com/facilities/seqmatic | SCR_012194 | SeqMatic LLC | 2026-08-15 11:31:11 | 86 | ||||||||
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University of Texas Health Science Center at San Antonio Genome Sequencing Facility Resource Report Resource Website |
University of Texas Health Science Center at San Antonio Genome Sequencing Facility (RRID:SCR_012237) | UTHSCSA GSF, GSF, UTHSCSA | service resource, access service resource, core facility | Core performs all protocols necessary for preparing a sample to be sequenced on the Illumina HiSeq2000 system. Core is also a research group with experience in customizing experiments and developing new applications. Core provides: Complete project consultation for optimal experimental design and setup, Super saver pricing for entire UT Health Science Center research community, especially research focusing on cancer genomics, Complete quality control analysis during library preparation and data generation, Secure website to download the sequencing data with quality information, Full project report, Bioinformatics analysis option available, NCBI GenBank submission option available | sequencing, genome sequencing, cancer, genomics |
is listed by: ScienceExchange has parent organization: University of Texas Health Science Center at San Antonio; Texas; USA |
Available to external user | SciEx_10985 | http://www.scienceexchange.com/facilities/genome-sequencing-facility-gsf | SCR_012237 | University of Texas Health Science Center at San Antonio Genome Sequencing Facility (GSF), University of Texas Health Science Center at San Antonio Genome Sequencing Facility, UTHSCSA Genome Sequencing Facility (GSF) | 2026-08-15 11:31:13 | 0 | ||||||
|
UTHSCSA Genomics Core Resource Report Resource Website |
UTHSCSA Genomics Core (RRID:SCR_012239) | UTHSCSA Genomics Core | service resource, access service resource, core facility | The mission of the Genomics Core is to provide state-of-the-art genomic services including genotyping and cell banking to investigators from UTHSCSA, CTRC and the local scientific community in an economical and timely manner. |
is listed by: ScienceExchange has parent organization: University of Texas Health Science Center at San Antonio; Texas; USA |
SciEx_10976 | SCR_012239 | University of Texas Health Science Center at San Antonio Genomics Core | 2026-08-15 11:31:02 | 0 | |||||||||
|
UTHSCSA X-ray Crystallography Core Laboratory Resource Report Resource Website |
UTHSCSA X-ray Crystallography Core Laboratory (RRID:SCR_012242) | UTHSCSA X-ray Crystallography Core Laboratory | service resource, access service resource, core facility | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 15, 2024. The mission of the X-ray Crystallography Core Laboratory is to provide state-of-the-art resources to researchers at the University of Texas Health Science Center at San Antonio, and to external users, enabling the detailed 3-D analyses of biological macromolecules that play important roles in human health. This is a full service core in that it not only offers access to sophisticated equipment and technologies but also offers advice and technical assistance in sample preparation. Services are also provided to investigators without funding to facilitate the development of pilot data for new potentially fundable projects, as core resources permit. If priority of usage becomes an issue, this will be decided by the Core Director in consultation with the other principal scientists based on the feasibility of the projects, their scientific merits and their relevance to human health. |
is listed by: ScienceExchange has parent organization: University of Texas Health Science Center at San Antonio; Texas; USA |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_10984 | SCR_012242 | University of Texas Health Science Center at San Antonio X-ray Crystallography Core Laboratory | 2026-08-15 11:31:13 | 0 | ||||||||
|
UTHSCSA MicroCT Core Laboratory Resource Report Resource Website |
UTHSCSA MicroCT Core Laboratory (RRID:SCR_012241) | UTHSCSA MicroCT Core Laboratory | service resource, access service resource, core facility | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 22, 2024. UTHSCSA Orthopaedics Bone and Mineral High-Resolution 3D Imaging Facility is a NIH-funded imaging facility equipped with two ex-vivo desktop microCT systems, a reference point indenter and a furnace. The non-destructive nature of microCT imaging allows the researcher to strengthen his/her research by using the same sample for histology or biomechanical testing after microCT imaging. Advantages of Micro-CT - Micro-CT allows for extremely high-resolution, non-destructive, 3D imaging. - No staining, sectioning, or sample preparation needed - Samples can be frozen or fixed - Since Micro-CT is non-destructive, other assays may be carried out after, thereby increasing the amount of data per sample - Data acquisition is a rapid process, allowing for a speedy return of samples |
is listed by: ScienceExchange has parent organization: University of Texas Health Science Center at San Antonio; Texas; USA |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_10978 | SCR_012241 | UTHSCSA Orthopaedics Bone and Mineral High-Resolution 3D Imaging Facility, University of Texas Health Science Center at San Antonio MicroCT Core Laboratory | 2026-08-15 11:31:17 | 0 | ||||||||
|
DIYgenomics Resource Report Resource Website |
DIYgenomics (RRID:SCR_012243) | DIYgenomics | service resource, access service resource, core facility | DIYgenomics provides crowdsourced health research study protocol design and operation in pre-clinical and disease cohorts. Founded in 2010, the mission of DIYgenomics is the realization of preventive medicine through the integrated study of multiple health data streams. The generalized hypothesis for DIYgenomics studies is that one or more genetic polymorphisms (mutations) may result in out-of-bounds phenotypic biomarker conditions (for example, low Vitamin B blood levels), that may be ameliorated through personalized intervention. | is listed by: ScienceExchange | SciEx_11254 | SCR_012243 | 2026-08-15 11:31:02 | 0 | ||||||||||
|
UC Berkeley Marvell Nanofabrication Laboratory Resource Report Resource Website 1+ mentions |
UC Berkeley Marvell Nanofabrication Laboratory (RRID:SCR_012246) | service resource, access service resource, core facility | The Marvell Nanofabrication Laboratory at the University of California, Berkeley is a multidisciplinary facility that serves research and education in the areas of integrated circuits (ICs) and systems, micro/nanofabrication technologies, micro/nanoelectromechanical (MEMS/NEMS) systems, advanced materials and interdisciplinary applications of microelectronics. This facility offers processing for both 4 inch and 6 inch substrates (wafers). | integrated circuits, micro/nanofabrication technology, |
is listed by: ScienceExchange is related to: University of California Berkeley Labs and Facilities has parent organization: University of California at Berkeley; Berkeley; USA |
SciEx_10987 | SCR_012246 | University of California Berkeley Marvell Nanofabrication Laboratory | 2026-08-15 11:31:18 | 1 | |||||||||
|
UTHSCSA Metabolomics Core Laboratory Mass Spectrometry Resource Report Resource Website |
UTHSCSA Metabolomics Core Laboratory Mass Spectrometry (RRID:SCR_012245) | UTHSCSA Metabolomics Core Laboratory Mass Spectrometry | service resource, access service resource, core facility | Cutting-edge mass spectrometers deliver extremely high mass accuracy and resolution to elucidate the identity and quantity of small molecules. Metabolomics Laboratory Services: Qualitative and quantitative analysis of small molecules - Molecular mass determination - Structural elucidation - Quantification Targeted and discovery modes of analysis - Quantitative analysis of targeted metabolites - Metabolite profiling for differential comparisons between experimental groups - High-throughput sample analysis The Metabolomics Laboratory is supported by awards from the National Institutes of Health, including a Shared Instrumentation grant (1S10RR031586-01) and a supplement to the Clinical and Translational Sciences Award (3UL1RR025767-03S1). |
is listed by: ScienceExchange has parent organization: University of Texas Health Science Center at San Antonio; Texas; USA |
SciEx_10986 | SCR_012245 | University of Texas Health Science Center at San Antonio Metabolomics Core Laboratory Mass Spectrometry, University of Texas Health Science Center at San Antonio Metabolomics Core Laboratory Mass Spectrometry (UTHSCSA), Metabolomics Core Laboratory Mass Spectrometry (UTHSCSA) | 2026-08-15 11:31:13 | 0 | |||||||||
|
UCLA Immunogenetics Center Resource Report Resource Website |
UCLA Immunogenetics Center (RRID:SCR_012206) | UIC | service resource, access service resource, core facility | The UCLA Immunogenetics Center (UIC) provides comprehensive testing for organ and tissue transplantation. Transplant testing has a long history at UCLA. HLA typing was pioneered here in the 1960''''s. The development of the microcytoxicity test in 1964 marked the beginning of international testing and standardization of HLA typing. The UCLA Immunogenetics Center has retained its leadership position in HLA research, and in the development of accompanying diagnostic testing. In the intervening years, laboratory and scientific personnel, from the US and abroad, have learned HLA typing through courses and workshops at the UCLA Immunogenetics laboratory. The center provides immunogenetics and histocompatibility testing services to a wide range of physicians, patients, pharmaceutical companies and other medical facilities. The laboratory is a World Health Organization reference laboratory for HLA, and is licensed by the State of California, New York, Maryland, Pennsylvania and Rhode Island, is CMS certified and accredited by the American Society for Histocompatibility and Immunogenetics. |
is listed by: ScienceExchange is related to: University of California Los Angeles Labs and Facilities has parent organization: University of California at Los Angeles; California; USA |
SciEx_10614 | SCR_012206 | University of California Los Angeles Immunogenetics Center | 2026-08-15 11:31:17 | 0 | |||||||||
|
UCLA High-Throughput Clinical Proteomics Core Resource Report Resource Website |
UCLA High-Throughput Clinical Proteomics Core (RRID:SCR_012205) | UCLA HTCP, UCLA HTCP Core | service resource, access service resource, core facility | THIS RESOURCE IS NO LONGER IN SERVCE, documented September 6, 2016. The High-Throughput Clinical Proteomics (HTCP) core laboratory is a mass spectrometry core facility designed to profile large numbers of clinical samples for changes in protein content. We use small amounts (micrograms) of protein from samples such as urine, plasma, CSF, and cell lysates and incubate them with magnetic beads that bind different subsets of the total proteome. We then examine the different subsets of small proteins and peptides by high-resolution MALDI-TOF mass spectrometry. We measure the amounts and intact masses of the proteins in the samples and determine which have the greatest statistical relevance in defining clinical groupings before moving to physically isolate those peptides/proteins and identify them. The method works best for peptides and small proteins below 25 kDa and is an excellent complement to gel-based methods such as DIGE. |
is listed by: ScienceExchange is related to: University of California Los Angeles Labs and Facilities has parent organization: University of California at Los Angeles; California; USA |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_10613 | SCR_012205 | University of California Los Angeles High-Throughput Clinical Proteomics Core | 2026-08-15 11:31:12 | 0 | ||||||||
|
Sanford-Burnham Applied Bioinformatics Core Facility Resource Report Resource Website |
Sanford-Burnham Applied Bioinformatics Core Facility (RRID:SCR_012208) | Sanford-Burnham Applied Bioinformatics Core | service resource, access service resource, core facility | THIS RESOURCE IS NO LONGER IN SERVICE, documented January 23, 2019. Core supports SBMRI investigators in exploring, understanding and analyzing complex biological data. Core is equipped with cutting-edge computational infrastructure and a selective collection of bioinformatics software. Core's services include consultation, data analysis and management, software development, and accessing to large computing resources. To meet various demands from the investigators, we provide services at multiple levels, from full service to cost-effective limited service as well as collaborative projects requiring longer-term commitment of time and effort. | data analysis, infrastructure, |
is listed by: ScienceExchange has parent organization: Sanford Burnham Prebys Medical Discovery Institute |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_10624 | SCR_012208 | , Applied Bioinformatics Core, Sanford-Burnham, Medical Research Institute | 2026-08-15 11:31:12 | 0 | |||||||
|
USF Center for Drug Discovery and Innovation Labs and Facilities Resource Report Resource Website |
USF Center for Drug Discovery and Innovation Labs and Facilities (RRID:SCR_012209) | USF CDDI Labs & Facilities, USF CDDI Labs and Facilities | service resource, access service resource, core facility | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on October 30,2023. The Center for Drug Discovery and Innovation (CDDI) is a Florida Center of Excellence serving the research community at USF and south Florida. From concept to clinical trials there are significant challenges in the successful development of new pharmaceuticals. It is the mission of CDDI to assist research groups at USF in overcoming some of the critical bottlenecks in early phase drug discovery. |
is listed by: ScienceExchange is related to: USF NMR Laboratory is related to: USF Mass Spectrometry Biological Applications and High-Throughput Proteomics Facility is related to: USF Chemodiversity Laboratory is related to: USF Protein Production and Cell Biology Laboratory has parent organization: University of South Florida; Florida; USA |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_10671 | SCR_012209 | University of South Florida Center for Drug Discovery and Innovation Labs & Facilities, University of South Florida Center for Drug Discovery and Innovation Labs and Facilities, USF Center for Drug Discovery and Innovation Labs & Facilities | 2026-08-15 11:31:17 | 0 | ||||||||
|
PostgreSQL Resource Report Resource Website 100+ mentions |
PostgreSQL (RRID:SCR_021067) | data or information resource, database | Open source object relational database system that uses and extends SQL language combined with many features that safely store and scale the most complicated data workloads. PostgreSQL runs on all major operating systems. | Object relational database system, SQL language, data storage, data, database system |
uses: pgAdmin is listed by: SoftCite has parent organization: University of California at Berkeley; Berkeley; USA |
Free, Available for download, Freely available | SCR_021067 | Postgres | 2026-08-15 11:29:36 | 166 | |||||||||
|
tfcheckpoint Resource Report Resource Website 1+ mentions |
tfcheckpoint (RRID:SCR_023880) | data or information resource, database | Collection of transcription factors annotated according to experimental and other evidence on their function as true DbTFs. Provides reference for both small scale experiments and genome scale studies. Curated compendium of specific DNA-binding RNA polymerase II transcription factors. | transcription factor, DNA-binding RNA polymerase II transcription factors, DNA-binding, RNA polymerase II transcription factors, | Norwegian Cancer Society ; Liaison Committee between the Central Norway Regional Health Authority ; Norwegian University of Science and Technology |
PMID:23933972 | Free, Freely available | SCR_023880 | 2026-08-15 11:29:37 | 4 | |||||||||
|
CaspBase Resource Report Resource Website 1+ mentions |
CaspBase (RRID:SCR_018975) | data or information resource, database | Database for evolutionary biochemical studies of caspase functional divergence and ancestral sequence inference. Tool to rapidly disseminate organized caspase sequence data. Includes all animal species with currently available annotated genomes in NCBI genome database. Manually curated and not curated sequences are available to download. | Caspase sequences, curated data, caspase, caspase functional divergence, ancestral sequence inference, data analysis, dataset |
is related to: NCBI Genome is related to: NCBI |
PMID:30076665 | Free, Available for download, Freely available | SCR_018975 | Caspase Sequence Database | 2026-08-15 11:29:36 | 2 | ||||||||
|
Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform Resource Report Resource Website 500+ mentions |
Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (RRID:SCR_023757) | TCMSP | data or information resource, database | Pharmacology platform of Chinese herbal medicines that captures relationships between drugs, targets and diseases. Database includes chemicals, targets and drug-target networks, and associated drug-target-disease networks, as well as pharmacokinetic properties for natural compounds involving oral bioavailability, drug-likeness, intestinal epithelial permeability, blood-brain-barrier, aqueous solubility. | Pharmacology platform, Chinese herbal medicines, drugs, targets and diseases, drug-target networks, natural compounds, pharmacokinetic properties, | National Natural Science Foundation of China | PMID:24735618 | Free, Freely available | https://tcmsp-e.com/ | SCR_023757 | TCMSP database | 2026-08-15 11:29:34 | 577 | ||||||
|
Adult Zebrafish Brain Atlas Resource Report Resource Website 1+ mentions |
Adult Zebrafish Brain Atlas (RRID:SCR_021732) | AZBA | data or information resource, atlas | Software tool as 3D adult zebrafish brain atlas for digital age. Built by combining tissue clearing, light-sheet fluorescence microscopy, and three-dimensional image registration of nuclear and antibody stains. | 3D adult zebrafish brain atlas, zebrafish brain, adult zebrafish brain, 3D brain | DOI:10.1101/2021.05.04.442625 | Free, Freely available | SCR_021732 | 2026-08-15 11:29:23 | 2 | |||||||||
|
SIFT 4G Resource Report Resource Website 1+ mentions |
SIFT 4G (RRID:SCR_021850) | analysis service resource, service resource, data analysis service, production service resource | Software tool to predict whether amino acid substitution affects protein function. Faster version of SIFT that enables to scale up and provide SIFT predictions for more organisms. | sequence homology, amino acids physical properties, amino acid substitution, protein function | is related to: SIFT | Free, Available for download, Freely available | https://github.com/rvaser/sift4g | SCR_021850 | Sorting Intolerant From Tolerant For Genomes, SIFT4G | 2026-08-15 11:29:34 | 4 | ||||||||
|
Blue Brain Cell Atlas Resource Report Resource Website 10+ mentions |
Blue Brain Cell Atlas (RRID:SCR_019266) | data or information resource, atlas | Describes number, types, and positions of cells in all areas of mouse brain. Provides densities and positions of all excitatory, inhibitory and neuromodulatory neurons, as well as astrocytes, oligodendrocytes and microglia in each of brain regions defined in Allen Mouse Brain Atlas. Users can download cell numbers for statistical analysis, cell positions and types for modeling and visualizing brain areas. Underlying workflow uses imaging data from Allen Institute Common Coordinate Framework to generate cell positions and assign their type using API for data access. | Cell number, cell type, cell position, brain area, mouse brain, neuromodulatory neurons, astrocytes, oligodendrocytes, microglia, imaging data, Allen Institute Common Coordinate Framework |
is used by: BICCN is related to: Allen Mouse Brain Reference Atlas is related to: Allen Institute for Brain Science is provided by: Blue Brain Project |
Free, Freely available | SCR_019266 | The Blue Brain Cell Atlas | 2026-08-15 11:29:23 | 11 |
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