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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
https://wikis.utexas.edu/display/GSAF/Home+Page
Full service sequencing core that provides both Sanger and Next Generation Sequencing services, in addition to library prep and quality check services, open access to equipment and training. Works directly with the bioinformatics core who can provide assist in any of your analysis needs to data storage solutions.
Proper citation: University of Texas at Austin Genomic Sequencing and Analysis Core Facility (RRID:SCR_021713) Copy
https://med.uottawa.ca/core-facilities/facilities/pre-clinical-imaging
Facility offers internal and external clients experimental solutions to carry out animal studies requiring in vivo imaging, including consultations, research plan design, protocol development, data collection, analysis, and reporting. PCIC offers modalities like MRI and ultrasound enabling translational research.
Proper citation: University of Ottawa Preclinical Imaging Core Facility (RRID:SCR_021832) Copy
https://www.cocainebiobank.org/
Repository of biological samples from genetically characterized outbred rats that exhibit compulsive like escalation of cocaine self administration. Biological tissue bank originating from outbred rats (Heterogenous Stock rats) that have been characterized as vulnerable or resistant to cocaine addiction. Samples are available under three different conditions to maximize compatibility with wide range of applications, including generation of iPSC lines (slow freezing/LN2), histology/neuroanatomy (perfused), and molecular biology (snap-frozen).
Proper citation: Cocaine Biobank (RRID:SCR_021796) Copy
https://www.ed.ac.uk/biology/research/facilities/edinomics
Research facility based in the School of Biological Sciences and the UK Centre for Mammalian Synthetic and Systems Biology that provides proteomics and metabolomics services for qualitative and quantitative analysis.
Proper citation: University of Edinburgh EdinOmics Core Facility (RRID:SCR_021838) Copy
https://github.com/HUST-NingKang-Lab/Meta-Prism-2.0
Software tool as microbial community sample search method based on smart pair wise sample comparison without compromising accuracy. Used as microbial communities similarites calculation and comparison tool.
Proper citation: Meta-Prism (RRID:SCR_021836) Copy
https://med.uottawa.ca/core-facilities/facilities/cbia
Core provides advanced microscopes, image analysis tools, and technical support to facilitate your microscopy research. Offers consultations to determine appropriate microscope for your specific needs and proper design of your experimental set up.
Proper citation: University of Ottawa Cell Biology and Image Acquisition Core Facility (RRID:SCR_021845) Copy
https://www.lerner.ccf.org/florida/cores/flow-cytometry/
Core offers cell sorting and high dimensional flow cytometric analysis as well as training, consultation and single cell partitioning for scRNA seq (10x).
Proper citation: Cleveland Clinic Florida FRIC Flow Cytometry Core Facility (RRID:SCR_021844) Copy
https://github.com/bsbrl/craniobot
Software tool as part of Craniobot system.Generates, sends, and receives commands to communicate with the Craniobot.
Proper citation: craniobot (RRID:SCR_021609) Copy
https://murphylab.med.ubc.ca/automated-homecages/
Software tool as part of Automated Home Cage Functional Imaging system.
Proper citation: Automated Home-Cage Functional Imaging (RRID:SCR_021607) Copy
https://opticalimagingcore.vai.org/
Core helps investigators tackle wide range of research questions, from gene expression to cell motility, and is committed to providing training in microscopy best practices. Service requests are placed through CrossLab Solutions.
Proper citation: Van Andel Institute Optical Imaging Core Facility (RRID:SCR_021968) Copy
https://nybloodcenter.org/lindsley-f-kimball-research-institute/core-facilities/flow-cytometry/
Core provides in house investigators and external clients with equipment for multiparameter flow cytometric analysis and cell sorting, training and expert assistance with various techniques in flow cytometry,cell sorting as well as consultation in experimental design, data analysis, presentation, and publication.
Proper citation: LFKRI New York Blood Center Flow Cytometry Core Facility (RRID:SCR_021779) Copy
http://www.med.uvm.edu/vigr/home
Core provides services for Experimental Design, Metagenomics, Comparative Expression Analyses, Variant Analyses, and Systems Biology. Overarching umbrella encompassing four distinct shared resource facility arms: DNA Analysis,Microarray,Massively Parallel Sequencing Facilities,Bioinformatics Shared Resource.
Proper citation: University of Vermont Integrative Genomics Resource Core Facility (RRID:SCR_021775) Copy
https://github.com/dublon/scintillate
Open source graphical viewer for time series calcium imaging evaluation and pre-processing.
Proper citation: Scintillate (RRID:SCR_021531) Copy
Core specializes in small molecule analysis. Services include, but are not limited to, quantitative mass spectrometry, liquid chromatography separations, fragmentation and structural elucidation mass spectrometry, complex mixture analysis, molecular formula confirmation, high resolution and accurate mass analysis.Provides individualized user training for undergraduate, graduate, and post-doctoral scholars of Department of Chemistry.
Proper citation: University of North Carolina at Chapel Hill Department of Chemistry Mass Spectrometry Core Facility (RRID:SCR_021937) Copy
https://github.com/agneslandemard/naturalsounds_analysis
Software tool as source code for analyzing functional ultrasound data.
Proper citation: naturalsounds analysis (RRID:SCR_021793) Copy
Provides optical and electron microscope infrastructure for live cell imaging, multi photon imaging, advanced sample preparation including cryo-preparation for electron microscopy, routine SEM and TEM, Cryo-TEM, TEM tomography, and Correlative Light and Electron Microscopy (CLEM). Equipped with 4 electron microscopes (1 SEM and 3 TEMs), 2 advanced fluorescence microscopes (confocal/multi-photon and spinning disk), cryo-fixation (High pressure freezer, Vitrobot) and EM processing equipment (Microwave, critical point dryer, coaters).Provides microscopy access, training and service.
Proper citation: University of British Columbia Vancouver Bioimaging Core Facility (RRID:SCR_021304) Copy
https://www.colorado.edu/lab/hts/instruments
Facility is equipped with instruments for both high throughput and high content biochemical and cell based assays, including live cell assays.
Proper citation: Colorado University at Boulder High Throughput Screening Core Facility (RRID:SCR_021789) Copy
https://mix-n-match.toolforge.org/#/
Software tool for importing data sets into Wikidata. Can list entries of some external databases, and allows users to match them against Wikidata items.
Proper citation: Mix n Match (RRID:SCR_021302) Copy
https://sluggenomicscenter.ucsc.edu/
Provides next generation sequencing data analysis through automated platform. Banana Slug Analytics Platform is intuitive, point-and-click system that leverages proven algorithms for next generation sequencing data analysis and helps researchers manage large volume studies without having bioinformatics expertise. Center also performs custom bioinformatics analysis and consultation as requested.
Proper citation: University of California Santa Cruz Banana Slug Genomics Center Core Facility (RRID:SCR_021360) Copy
https://www.biotech.cornell.edu/core-facilities-brc/facilities/bioinformatics-facility
Facility provides access to high performance computing environment, BioHPC, which includes both hosted hardware and shared machines. Provides consulting and collaborations for Bioinformatics analysis and workflows.
Proper citation: Cornell University BRC Bioinformatics Core Facility (RRID:SCR_021757) Copy
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