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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
NIAG Addiction Data Resource Report Resource Website |
NIAG Addiction Data (RRID:SCR_015523) | data or information resource, data set | Data set of addiction studies compiled by the NeuroImaging and Analysis Group (NIAG). | addiction, neuroimaging, data set |
works with: SPM works with: DTIProcess ToolKit works with: FreeSurfer works with: Analysis of Functional NeuroImages |
Open Source | http://niag.ir/ | SCR_015523 | NeuroImaging and Analysis Group Addiction Data | 2026-08-15 11:31:18 | 0 | ||||||||
|
University of Washington Nutrition and Obesity Research Center Adipose Tissue and Obesity Core Resource Report Resource Website |
University of Washington Nutrition and Obesity Research Center Adipose Tissue and Obesity Core (RRID:SCR_015481) | resource, service resource, access service resource, core facility | Core that provides affiliated investigators with assistance for in vivo and in vitro studies in both subcutaneous and visceral human adipose tissue. Body and liver fat measurement by DXA and MRI are also provided, as is support for translational studies that assist investigators in the design conduct of clinical obesity research. | in vivo study, in vitro study, subcutaneous human adipose tissue, visceral human adipose tissue, liver fat, translational study, clinical obesity research |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Washington; Seattle; USA has parent organization: University of Washington Nutrition and Obesity Research Center is organization facet of: University of Washington Nutrition and Obesity Research Center |
Obesity | NIDDK P30DK035816 | Available to the research community, Fee for service | SCR_015481 | 2026-08-15 11:31:18 | 0 | ||||||||
|
ABCD Study Resource Report Resource Website 500+ mentions |
ABCD Study (RRID:SCR_015769) | ABCD | data or information resource, data set | Long-term study of brain development and child health in the United States. The study tracks subjects' biological and behavioral development through adolescence into young adulthood to determine how childhood experiences (such as sports, videogames, social media, unhealthy sleep patterns, and smoking) interact with each other and with a child’s changing biology to affect brain development and social, behavioral, academic, health, and other outcomes. | clinical study, adolescent, development, research, neuroimaging, brain development |
is related to: DEAP - Data Exploration and Analysis Portal works with: geocoding |
NIDA U24 DA041123; NIDA U24 DA041147; NIDA U01 DA041120; NIDA U01 DA041022; NIDA U01 DA041025; NIDA U01 DA041093; NIDA U01 DA041028; NIDA U01 DA041048; NIDA U01 DA041106; NIDA U01 DA041134; NIDA U01 DA041148; NIDA U01 DA041156; NIDA U01 DA041174; NIDA U24DA041123; NIDA U01 DA041117 |
PMID:29051027 | Available to the scientific community | SCR_015769 | The Adolescent Brain Cognitive Development Study | 2026-08-15 11:31:19 | 927 | ||||||
|
University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis Immunology Core Resource Report Resource Website |
University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis Immunology Core (RRID:SCR_015409) | resource, service resource, access service resource, core facility | Core facility which provides a variety of assay services to evaluate cell-mediated and humoral responses to in animal models of gene therapies. | cell assay, assay service, gene therapy, animal model |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Pennsylvania Perelman School of Medicine; Pennsylvania; USA has parent organization: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis is organization facet of: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis |
Cystic Fibrosis | NIDDK P30DK047757 | Available to the research community | SCR_015409 | 2026-08-15 11:31:29 | 0 | ||||||||
|
University of Iowa Center for Gene Therapy Cell Tissue Core Resource Report Resource Website |
University of Iowa Center for Gene Therapy Cell Tissue Core (RRID:SCR_015410) | resource, service resource, access service resource, core facility | Core that provides centralized access to non-cystic fibrosis and cystic fibrosis tissue specimens and airway cells used for model systems to assess gene transfer to the airway and pathophysiology in cystic fibrosis. | cytstic fibrosis, cytstic fibrosis tissue, cytstic fibrosis animal model, cytstic fibrosis pathophysiology |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Iowa Carver College of Medicine; Iowa; USA has parent organization: University of Iowa Center for Gene Therapy is organization facet of: University of Iowa Center for Gene Therapy |
Cystic Fibrosis | NIDDK P30DK054759 | Available to the research community | SCR_015410 | 2026-08-15 11:31:31 | 0 | ||||||||
|
New York Obesity Nutrition Research Center Animal Phenotyping Core Resource Report Resource Website |
New York Obesity Nutrition Research Center Animal Phenotyping Core (RRID:SCR_015414) | resource, service resource, access service resource, core facility | Core that allows investigators to efficiently and cost effectively define the phenotypes of small rodents in ways that are relevant to the study of obesity, nutrition, and metabolism. Its services range from whole animal measurements of body composition and energy utilization, to ex vivo measurements of substrate fluxes, to histological analyses of adipose tissue. | animal phenotyping, adipose tissue, body composition analysis |
is listed by: NIDDK Information Network (dkNET) has parent organization: Columbia University; New York; USA has parent organization: New York Obesity Nutrition Research Center is organization facet of: New York Obesity Nutrition Research Center |
Obesity | NIDDK P30DK026687 | Available to the research community, Acknowledgement requested | SCR_015414 | 2026-08-15 11:31:31 | 0 | ||||||||
|
kCSD-python Resource Report Resource Website 1+ mentions |
kCSD-python (RRID:SCR_015777) | software resource, source code | Source code for the Python implementation of the kernel Current Source Density method. The method operates in one-, two-, and three-dimensional space to perform nonparametric estimation of transmembrane current sources from local field potentials recorded from arbitrarily distributed electrodes. | kernel current source density, 1d, 2d, 3d, python, local field potential, transmembrane current source | uses: Python Programming Language | PMID:22091662 | Free, Available for download | SCR_015777 | kernel current source density method - python, kCSD inverse method, Kernel Current Source Density Method | 2026-08-15 11:31:32 | 7 | ||||||||
|
lme4 Resource Report Resource Website 100+ mentions |
lme4 (RRID:SCR_015654) | software resource, source code | Software R package. Fit linear and generalized linear mixed-effects models. The models and their components are represented using S4 classes and methods. The core computational algorithms are implemented using the 'Eigen' C++ library for numerical linear algebra and 'RcppEigen' "glue." | linear mixed-effects model, s4 class, eigen c++ library, r package, r, bio.tools |
is listed by: CRAN is listed by: bio.tools is listed by: Debian works with: R package: lmerTest |
Free, Available for download | biotools:lme4 | https://cran.r-project.org/package=lme4, https://github.com/lme4/lme4/, https://bio.tools/lme4 | SCR_015654 | lme4, lme4.0, lme4: Linear Mixed-Effects Models using 'Eigen' and S4, lme4: Linear Mixed-Effects Models, R package: lme4 | 2026-08-15 11:31:32 | 411 | |||||||
|
SP Scientific Resource Report Resource Website 1+ mentions |
SP Scientific (RRID:SCR_017367) | material resource, instrument supplier | Commercial organization located in Warminster, Pennsylvania, USA, part of SP Industries, Inc. Provides VirTis, FTS Systems, Hotpack, Hull, Genevac, and PennTech scientific equipment. Manufactures freeze drying/lyophilization, centrifugal evaporation and concentration, temperature control/thermal management, glassware washers, controlled environments, vial washing and tray loading machines., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | Manufacturer, commercial, organization, component, laboratory, equipment | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_017367 | 2026-08-15 11:31:34 | 2 | |||||||||||
|
Bruker Corporation Resource Report Resource Website 1+ mentions |
Bruker Corporation (RRID:SCR_017365) | material resource, instrument supplier | Commercial organization located in Massachusetts, USA, for scientific instruments and analytical and diagnostic solutions. Bruker equipment can be used in life science molecular research, in applied and pharma applications,microscopy, nano-analysis and industrial applications. Provider of high-performance systems for cell biology, preclinical imaging, clinical phenomics and proteomics research, clinical microbiology, and for molecular pathology research. | Manufacturer, corporation, commercial, instrument, analytical, diagnostic, equipment | SCR_017365 | 2026-08-15 11:31:32 | 4 | ||||||||||||
|
Mikado Resource Report Resource Website 50+ mentions |
Mikado (RRID:SCR_016159) | software resource, source code | Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to select the best models in each locus. | annotation, rna-seq, genomics, transcriptomics | is related to: Portcullis | BBSRC BB/J004669/1; BBSRC BB/J010375/1; BBSRC BB/CSP17270/1; BBSRC BB/CCG1720/1 |
DOI:10.1101/216994 | Free, Available for download | http://mikado.readthedocs.io/ | SCR_016159 | 2026-08-15 11:31:31 | 93 | |||||||
|
National High Magnetic Field Laboratory High B/T Core Facility Resource Report Resource Website |
National High Magnetic Field Laboratory High B/T Core Facility (RRID:SCR_017360) | B/T | service resource, access service resource, core facility | Facility to conduct experiments in high magnetic fields up to 15 tesla and at very low temperatures down to 0.4 mK simultaneously. Located at University of Florida in Gainesville, it is operated as part of Physics Department Microkelvin Laboratory. | Magnetic, field, temperature | is related to: University of Florida; Florida; USA | NSF DMR-1644779; Florida State ; NIH ; Department of Energy ; Department of Defense |
Restricted | SCR_017360 | NHMF Laboratory High B/T Facility, High B/T (magnetic field / temperature) Facility, High B/T Facility | 2026-08-15 11:31:21 | 0 | |||||||
|
National MagLab University of Florida McKnight Brain Institute Advanced Magnetic Resonance Imaging and Spectroscopy AMRIS Core Facility Resource Report Resource Website 500+ mentions |
National MagLab University of Florida McKnight Brain Institute Advanced Magnetic Resonance Imaging and Spectroscopy AMRIS Core Facility (RRID:SCR_017362) | AMRIS | service resource, access service resource, core facility | National High Magnetic Field Laboratory (MagLab) site. It provides researchers with advanced NMR, MRI, and spectroscopy tools (human/animal imaging) for biomedical studies, specializing in high-field magnetic resonance technology. Hosts spectrometers and scanners, including high-field NMR (up to 1.5 GHz), MR microscopy, and human/animal MRI systems (e.g., 3T and 900 MHz). Offers expertise in high-resolution solution NMR, solid-state NMR, and specialized imaging for in vivo animal models and humans.Features an RF coil lab that designs, builds, and tests custom MRI/NMR coils to optimize data collection. Supports research into Alzheimer's, cancer, metabolism, and brain development. | Nuclear Magnetic Resonance, Magnetic Resonance Imaging, spectroscopy, magnetic resonans, scanner, magnet |
has parent organization: National High Magnetic Field Laboratory has parent organization: University of Florida; Florida; USA |
Department of Defense ; Department of Energy ; NSF DMR-1644779; NSF DMR-2128556; NSF DMR-1157490; State of Florida |
Restricted | SCR_017363 | https://nationalmaglab.org/user-facilities/nmr-mri, https://nationalmaglab.org | SCR_017362 | , Advanced Magnetic Resonance Imaging and Spectroscopy AMRIS Facility | 2026-08-15 11:31:34 | 859 | |||||
|
Emory Epithelial Pathobiology Research Development Center Image Analysis Core Resource Report Resource Website |
Emory Epithelial Pathobiology Research Development Center Image Analysis Core (RRID:SCR_015909) | service resource, access service resource, core facility | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 5th,2023. Core facility for the Emory Epithelial Pathobiology Research Development Center. | epithelial, pathobiology, research, development, image, analysis | is organization facet of: Emory Epithelial Pathobiology Research Development Center | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_015909 | 2026-08-15 11:31:30 | 0 | ||||||||||
|
MMPC Vanderbilt University School of Medicine Body Weight Regulation Core Resource Report Resource Website |
MMPC Vanderbilt University School of Medicine Body Weight Regulation Core (RRID:SCR_015905) | service resource, access service resource, core facility | Core facility for MMPC Vanderbilt University School of Medicine for studying impact of genetic, surgical, dietary and pharmacologic manipulations on body weight regulation. Core provides measurement of food intake, energy expenditure, and behavioral factors. Energy balance studies are performed in mouse home cage to minimize stress. Mitochondrial function is assessed on permeabilized tissues, isolated cells, or isolated mitochondria. Mouse models of bariatric surgery have been developed and studied extensively. | mouse, body, weight, regulation, nutrition, medicine | is organization facet of: MMPC-Vanderbilt University School of Medicine | NIDDK DK135073; NIDDK DK020593 |
SCR_015923 | https://labnodes.vanderbilt.edu/resource/view/id/14699/community_id/1418 | SCR_015905 | Body Weight Regulation Core | 2026-08-15 11:31:30 | 0 | |||||||
|
Emory Epithelial Pathobiology Research Development Center Gene Expression Analysis Core Resource Report Resource Website |
Emory Epithelial Pathobiology Research Development Center Gene Expression Analysis Core (RRID:SCR_015906) | service resource, access service resource, core facility | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 5th,2023. Core facility for the Emory Epithelial Pathobiology Research Development Center. | epithelial, pathobiology, research, development | is organization facet of: Emory Epithelial Pathobiology Research Development Center | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_015906 | 2026-08-15 11:31:33 | 0 | ||||||||||
|
Penn machine learning benchmark repository Resource Report Resource Website |
Penn machine learning benchmark repository (RRID:SCR_017138) | PMLB | data or information resource, data set | Python wrapper for Penn Machine Learning Benchmark data repository. Large, curated repository of benchmark datasets for evaluating supervised machine learning algorithms. Part of PyPI https://pypi.org/ | benchmark, suite, machine, learning, evaluation, comparison, repository, curated, dataset | NIAID AI116794; NIDDK DK112217; NIEHS ES013508; NEI EY022300; NHLBI HL134015; NLM LM009012; NLM LM010098; NLM LM011360; NCATS TR001263; Warren Center for Network and Data Science |
PMID:29238404 | Free, Restricted | https://github.com/EpistasisLab/penn-ml-benchmarks | SCR_017138 | Penn Machine Learning Benchmark | 2026-08-15 11:31:20 | 0 | ||||||
|
Scientific Magnetics Resource Report Resource Website |
Scientific Magnetics (RRID:SCR_017370) | material resource, instrument supplier | Commercial organization, located in Houston, Texas, USA. Scientific Magnetics is trading name of Space Cryomagnetics Ltd. and specializes in cryogen free super conducting magnets. Products including cryogen free horizontal superconducting magnets, UHV compatible magnets, magnetic separation products, MRI site planning, and liquid helium filling. | Magnets, commercial, magnetic, resonance, imaging, cryogen, free, super, conducting, magnet, liquid, helium, filling | SCR_017370 | 2026-08-15 11:31:21 | 0 | ||||||||||||
|
RPPA Core Facility Resource Report Resource Website 10+ mentions |
RPPA Core Facility (RRID:SCR_016649) | RPPA | service resource, access service resource, core facility | Core provides technology for functional proteomics studies and centralized, standardized and quality controlled services locally and globally. | technology, functional, proteomics, studies, centralized, standardized, quality, controlled, service | has parent organization: University of Texas MD Anderson Cancer Center | NCI CA16672 | Commercially available, Registration required | SCR_016649 | MD Anderson RPPA Core, RPPA, Reverse Phase Protein Array Core, Reverse Phase Protein Array (RPPA) Core | 2026-08-15 11:31:31 | 45 | |||||||
|
MIT KIICR Biopolymers and Proteomics Core Facility Resource Report Resource Website 1+ mentions |
MIT KIICR Biopolymers and Proteomics Core Facility (RRID:SCR_017737) | service resource, access service resource, core facility | Facility provides integrated synthetic and analytical capabilities for biological materials, including proteins, peptides, and nanoparticles, range of technical expertise and instrumentation. Access is available to all members of MIT community. Priority access is given to KI members, NCI-funded research projects and other contributing user groups in recognition of funding support. In special circumstances, access may be available to non-MIT users. | Synthetic, analytical, bioplymer, protein, peptide, nanoparticles, technical, expertise, instrumentation, MIT, service, core | National Cancer Institute Cancer Center Support Grant | Restricted | ABRF_213 | SCR_017737 | KI Swanson Biotechnology Center Biopolymers and Proteomics Core Facility | 2026-08-15 11:31:34 | 1 |
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