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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
NIAG Addiction Data
 
Resource Report
Resource Website
NIAG Addiction Data (RRID:SCR_015523) data or information resource, data set Data set of addiction studies compiled by the NeuroImaging and Analysis Group (NIAG). addiction, neuroimaging, data set works with: SPM
works with: DTIProcess ToolKit
works with: FreeSurfer
works with: Analysis of Functional NeuroImages
Open Source http://niag.ir/ SCR_015523 NeuroImaging and Analysis Group Addiction Data 2026-08-15 11:31:18 0
University of Washington Nutrition and Obesity Research Center Adipose Tissue and Obesity Core
 
Resource Report
Resource Website
University of Washington Nutrition and Obesity Research Center Adipose Tissue and Obesity Core (RRID:SCR_015481) resource, service resource, access service resource, core facility Core that provides affiliated investigators with assistance for in vivo and in vitro studies in both subcutaneous and visceral human adipose tissue. Body and liver fat measurement by DXA and MRI are also provided, as is support for translational studies that assist investigators in the design conduct of clinical obesity research. in vivo study, in vitro study, subcutaneous human adipose tissue, visceral human adipose tissue, liver fat, translational study, clinical obesity research is listed by: NIDDK Information Network (dkNET)
has parent organization: University of Washington; Seattle; USA
has parent organization: University of Washington Nutrition and Obesity Research Center
is organization facet of: University of Washington Nutrition and Obesity Research Center
Obesity NIDDK P30DK035816 Available to the research community, Fee for service SCR_015481 2026-08-15 11:31:18 0
ABCD Study
 
Resource Report
Resource Website
500+ mentions
ABCD Study (RRID:SCR_015769) ABCD data or information resource, data set Long-term study of brain development and child health in the United States. The study tracks subjects' biological and behavioral development through adolescence into young adulthood to determine how childhood experiences (such as sports, videogames, social media, unhealthy sleep patterns, and smoking) interact with each other and with a child’s changing biology to affect brain development and social, behavioral, academic, health, and other outcomes. clinical study, adolescent, development, research, neuroimaging, brain development is related to: DEAP - Data Exploration and Analysis Portal
works with: geocoding
NIDA U24 DA041123;
NIDA U24 DA041147;
NIDA U01 DA041120;
NIDA U01 DA041022;
NIDA U01 DA041025;
NIDA U01 DA041093;
NIDA U01 DA041028;
NIDA U01 DA041048;
NIDA U01 DA041106;
NIDA U01 DA041134;
NIDA U01 DA041148;
NIDA U01 DA041156;
NIDA U01 DA041174;
NIDA U24DA041123;
NIDA U01 DA041117
PMID:29051027 Available to the scientific community SCR_015769 The Adolescent Brain Cognitive Development Study 2026-08-15 11:31:19 927
University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis Immunology Core
 
Resource Report
Resource Website
University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis Immunology Core (RRID:SCR_015409) resource, service resource, access service resource, core facility Core facility which provides a variety of assay services to evaluate cell-mediated and humoral responses to in animal models of gene therapies. cell assay, assay service, gene therapy, animal model is listed by: NIDDK Information Network (dkNET)
has parent organization: University of Pennsylvania Perelman School of Medicine; Pennsylvania; USA
has parent organization: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis
is organization facet of: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis
Cystic Fibrosis NIDDK P30DK047757 Available to the research community SCR_015409 2026-08-15 11:31:29 0
University of Iowa Center for Gene Therapy Cell Tissue Core
 
Resource Report
Resource Website
University of Iowa Center for Gene Therapy Cell Tissue Core (RRID:SCR_015410) resource, service resource, access service resource, core facility Core that provides centralized access to non-cystic fibrosis and cystic fibrosis tissue specimens and airway cells used for model systems to assess gene transfer to the airway and pathophysiology in cystic fibrosis. cytstic fibrosis, cytstic fibrosis tissue, cytstic fibrosis animal model, cytstic fibrosis pathophysiology is listed by: NIDDK Information Network (dkNET)
has parent organization: University of Iowa Carver College of Medicine; Iowa; USA
has parent organization: University of Iowa Center for Gene Therapy
is organization facet of: University of Iowa Center for Gene Therapy
Cystic Fibrosis NIDDK P30DK054759 Available to the research community SCR_015410 2026-08-15 11:31:31 0
New York Obesity Nutrition Research Center Animal Phenotyping Core
 
Resource Report
Resource Website
New York Obesity Nutrition Research Center Animal Phenotyping Core (RRID:SCR_015414) resource, service resource, access service resource, core facility Core that allows investigators to efficiently and cost effectively define the phenotypes of small rodents in ways that are relevant to the study of obesity, nutrition, and metabolism. Its services range from whole animal measurements of body composition and energy utilization, to ex vivo measurements of substrate fluxes, to histological analyses of adipose tissue. animal phenotyping, adipose tissue, body composition analysis is listed by: NIDDK Information Network (dkNET)
has parent organization: Columbia University; New York; USA
has parent organization: New York Obesity Nutrition Research Center
is organization facet of: New York Obesity Nutrition Research Center
Obesity NIDDK P30DK026687 Available to the research community, Acknowledgement requested SCR_015414 2026-08-15 11:31:31 0
kCSD-python
 
Resource Report
Resource Website
1+ mentions
kCSD-python (RRID:SCR_015777) software resource, source code Source code for the Python implementation of the kernel Current Source Density method. The method operates in one-, two-, and three-dimensional space to perform nonparametric estimation of transmembrane current sources from local field potentials recorded from arbitrarily distributed electrodes. kernel current source density, 1d, 2d, 3d, python, local field potential, transmembrane current source uses: Python Programming Language PMID:22091662 Free, Available for download SCR_015777 kernel current source density method - python, kCSD inverse method, Kernel Current Source Density Method 2026-08-15 11:31:32 7
lme4
 
Resource Report
Resource Website
100+ mentions
lme4 (RRID:SCR_015654) software resource, source code Software R package. Fit linear and generalized linear mixed-effects models. The models and their components are represented using S4 classes and methods. The core computational algorithms are implemented using the 'Eigen' C++ library for numerical linear algebra and 'RcppEigen' "glue." linear mixed-effects model, s4 class, eigen c++ library, r package, r, bio.tools is listed by: CRAN
is listed by: bio.tools
is listed by: Debian
works with: R package: lmerTest
Free, Available for download biotools:lme4 https://cran.r-project.org/package=lme4, https://github.com/lme4/lme4/, https://bio.tools/lme4 SCR_015654 lme4, lme4.0, lme4: Linear Mixed-Effects Models using 'Eigen' and S4, lme4: Linear Mixed-Effects Models, R package: lme4 2026-08-15 11:31:32 411
SP Scientific
 
Resource Report
Resource Website
1+ mentions
SP Scientific (RRID:SCR_017367) material resource, instrument supplier Commercial organization located in Warminster, Pennsylvania, USA, part of SP Industries, Inc. Provides VirTis, FTS Systems, Hotpack, Hull, Genevac, and PennTech scientific equipment. Manufactures freeze drying/lyophilization, centrifugal evaporation and concentration, temperature control/thermal management, glassware washers, controlled environments, vial washing and tray loading machines., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. Manufacturer, commercial, organization, component, laboratory, equipment THIS RESOURCE IS NO LONGER IN SERVICE SCR_017367 2026-08-15 11:31:34 2
Bruker Corporation
 
Resource Report
Resource Website
1+ mentions
Bruker Corporation (RRID:SCR_017365) material resource, instrument supplier Commercial organization located in Massachusetts, USA, for scientific instruments and analytical and diagnostic solutions. Bruker equipment can be used in life science molecular research, in applied and pharma applications,microscopy, nano-analysis and industrial applications. Provider of high-performance systems for cell biology, preclinical imaging, clinical phenomics and proteomics research, clinical microbiology, and for molecular pathology research. Manufacturer, corporation, commercial, instrument, analytical, diagnostic, equipment SCR_017365 2026-08-15 11:31:32 4
Mikado
 
Resource Report
Resource Website
50+ mentions
Mikado (RRID:SCR_016159) software resource, source code Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to select the best models in each locus. annotation, rna-seq, genomics, transcriptomics is related to: Portcullis BBSRC BB/J004669/1;
BBSRC BB/J010375/1;
BBSRC BB/CSP17270/1;
BBSRC BB/CCG1720/1
DOI:10.1101/216994 Free, Available for download http://mikado.readthedocs.io/ SCR_016159 2026-08-15 11:31:31 93
National High Magnetic Field Laboratory High B/T Core Facility
 
Resource Report
Resource Website
National High Magnetic Field Laboratory High B/T Core Facility (RRID:SCR_017360) B/T service resource, access service resource, core facility Facility to conduct experiments in high magnetic fields up to 15 tesla and at very low temperatures down to 0.4 mK simultaneously. Located at University of Florida in Gainesville, it is operated as part of Physics Department Microkelvin Laboratory. Magnetic, field, temperature is related to: University of Florida; Florida; USA NSF DMR-1644779;
Florida State ;
NIH ;
Department of Energy ;
Department of Defense
Restricted SCR_017360 NHMF Laboratory High B/T Facility, High B/T (magnetic field / temperature) Facility, High B/T Facility 2026-08-15 11:31:21 0
National MagLab University of Florida McKnight Brain Institute Advanced Magnetic Resonance Imaging and Spectroscopy AMRIS Core Facility
 
Resource Report
Resource Website
500+ mentions
National MagLab University of Florida McKnight Brain Institute Advanced Magnetic Resonance Imaging and Spectroscopy AMRIS Core Facility (RRID:SCR_017362) AMRIS service resource, access service resource, core facility National High Magnetic Field Laboratory (MagLab) site. It provides researchers with advanced NMR, MRI, and spectroscopy tools (human/animal imaging) for biomedical studies, specializing in high-field magnetic resonance technology. Hosts spectrometers and scanners, including high-field NMR (up to 1.5 GHz), MR microscopy, and human/animal MRI systems (e.g., 3T and 900 MHz). Offers expertise in high-resolution solution NMR, solid-state NMR, and specialized imaging for in vivo animal models and humans.Features an RF coil lab that designs, builds, and tests custom MRI/NMR coils to optimize data collection. Supports research into Alzheimer's, cancer, metabolism, and brain development. Nuclear Magnetic Resonance, Magnetic Resonance Imaging, spectroscopy, magnetic resonans, scanner, magnet has parent organization: National High Magnetic Field Laboratory
has parent organization: University of Florida; Florida; USA
Department of Defense ;
Department of Energy ;
NSF DMR-1644779;
NSF DMR-2128556;
NSF DMR-1157490;
State of Florida
Restricted SCR_017363 https://nationalmaglab.org/user-facilities/nmr-mri, https://nationalmaglab.org SCR_017362 , Advanced Magnetic Resonance Imaging and Spectroscopy AMRIS Facility 2026-08-15 11:31:34 859
Emory Epithelial Pathobiology Research Development Center Image Analysis Core
 
Resource Report
Resource Website
Emory Epithelial Pathobiology Research Development Center Image Analysis Core (RRID:SCR_015909) service resource, access service resource, core facility THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 5th,2023. Core facility for the Emory Epithelial Pathobiology Research Development Center. epithelial, pathobiology, research, development, image, analysis is organization facet of: Emory Epithelial Pathobiology Research Development Center THIS RESOURCE IS NO LONGER IN SERVICE SCR_015909 2026-08-15 11:31:30 0
MMPC Vanderbilt University School of Medicine Body Weight Regulation Core
 
Resource Report
Resource Website
MMPC Vanderbilt University School of Medicine Body Weight Regulation Core (RRID:SCR_015905) service resource, access service resource, core facility Core facility for MMPC Vanderbilt University School of Medicine for studying impact of genetic, surgical, dietary and pharmacologic manipulations on body weight regulation. Core provides measurement of food intake, energy expenditure, and behavioral factors. Energy balance studies are performed in mouse home cage to minimize stress. Mitochondrial function is assessed on permeabilized tissues, isolated cells, or isolated mitochondria. Mouse models of bariatric surgery have been developed and studied extensively. mouse, body, weight, regulation, nutrition, medicine is organization facet of: MMPC-Vanderbilt University School of Medicine NIDDK DK135073;
NIDDK DK020593
SCR_015923 https://labnodes.vanderbilt.edu/resource/view/id/14699/community_id/1418 SCR_015905 Body Weight Regulation Core 2026-08-15 11:31:30 0
Emory Epithelial Pathobiology Research Development Center Gene Expression Analysis Core
 
Resource Report
Resource Website
Emory Epithelial Pathobiology Research Development Center Gene Expression Analysis Core (RRID:SCR_015906) service resource, access service resource, core facility THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 5th,2023. Core facility for the Emory Epithelial Pathobiology Research Development Center. epithelial, pathobiology, research, development is organization facet of: Emory Epithelial Pathobiology Research Development Center THIS RESOURCE IS NO LONGER IN SERVICE SCR_015906 2026-08-15 11:31:33 0
Penn machine learning benchmark repository
 
Resource Report
Resource Website
Penn machine learning benchmark repository (RRID:SCR_017138) PMLB data or information resource, data set Python wrapper for Penn Machine Learning Benchmark data repository. Large, curated repository of benchmark datasets for evaluating supervised machine learning algorithms. Part of PyPI https://pypi.org/ benchmark, suite, machine, learning, evaluation, comparison, repository, curated, dataset NIAID AI116794;
NIDDK DK112217;
NIEHS ES013508;
NEI EY022300;
NHLBI HL134015;
NLM LM009012;
NLM LM010098;
NLM LM011360;
NCATS TR001263;
Warren Center for Network and Data Science
PMID:29238404 Free, Restricted https://github.com/EpistasisLab/penn-ml-benchmarks SCR_017138 Penn Machine Learning Benchmark 2026-08-15 11:31:20 0
Scientific Magnetics
 
Resource Report
Resource Website
Scientific Magnetics (RRID:SCR_017370) material resource, instrument supplier Commercial organization, located in Houston, Texas, USA. Scientific Magnetics is trading name of Space Cryomagnetics Ltd. and specializes in cryogen free super conducting magnets. Products including cryogen free horizontal superconducting magnets, UHV compatible magnets, magnetic separation products, MRI site planning, and liquid helium filling. Magnets, commercial, magnetic, resonance, imaging, cryogen, free, super, conducting, magnet, liquid, helium, filling SCR_017370 2026-08-15 11:31:21 0
RPPA Core Facility
 
Resource Report
Resource Website
10+ mentions
RPPA Core Facility (RRID:SCR_016649) RPPA service resource, access service resource, core facility Core provides technology for functional proteomics studies and centralized, standardized and quality controlled services locally and globally. technology, functional, proteomics, studies, centralized, standardized, quality, controlled, service has parent organization: University of Texas MD Anderson Cancer Center NCI CA16672 Commercially available, Registration required SCR_016649 MD Anderson RPPA Core, RPPA, Reverse Phase Protein Array Core, Reverse Phase Protein Array (RPPA) Core 2026-08-15 11:31:31 45
MIT KIICR Biopolymers and Proteomics Core Facility
 
Resource Report
Resource Website
1+ mentions
MIT KIICR Biopolymers and Proteomics Core Facility (RRID:SCR_017737) service resource, access service resource, core facility Facility provides integrated synthetic and analytical capabilities for biological materials, including proteins, peptides, and nanoparticles, range of technical expertise and instrumentation. Access is available to all members of MIT community. Priority access is given to KI members, NCI-funded research projects and other contributing user groups in recognition of funding support. In special circumstances, access may be available to non-MIT users. Synthetic, analytical, bioplymer, protein, peptide, nanoparticles, technical, expertise, instrumentation, MIT, service, core National Cancer Institute Cancer Center Support Grant Restricted ABRF_213 SCR_017737 KI Swanson Biotechnology Center Biopolymers and Proteomics Core Facility 2026-08-15 11:31:34 1

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