Searching the RRID Resource Information Network

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes

Preparing word cloud

×

SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

Search

Type in a keyword to search

Filter by records added date
See new records

Options


Current Facets and Filters

  • Mentions:yes (facet)

Facets


Recent searches

Snippet view Table view
Click the to add this resource to a Collection

16,813 Results - per page

Show More Columns | Download Top 1000 Results

Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
ALTree
 
Resource Report
Resource Website
1+ mentions
ALTree (RRID:SCR_007562) data processing software, software application, data analysis software, software resource Software package to perform phylogeny based association and localization analysis.Used for association detection and localization of susceptibility sites using haplotype phylogenetic trees. Performs these two phylogeny-based analysis: tests association between candidate gene and disease; pinpoints markers (SNPs) that are putative disease susceptibility loci. phylogeny based association, association detection, susceptibility sites, haplotype phylogenetic trees, gene, genetic, genomic is listed by: Genetic Analysis Software
is listed by: Debian
PMID:16595555
DOI:10.1093/bioinformatics/btl131
Free, Available for download, Freely available OMICS_13032, nlx_154221 https://sources.debian.org/src/altree/, https://gitlab.inria.fr/NGS/ALTree, SCR_007562 ALTREE 2026-08-15 11:23:37 3
Organelle DB
 
Resource Report
Resource Website
1+ mentions
Organelle DB (RRID:SCR_007837) Organelle DB database, data repository, storage service resource, d spatial image, data or information resource, image collection, service resource Database of organelle proteins, and subcellular structures / complexes from compiled protein localization data from organisms spanning the eukaryotic kingdom. All data may be downloaded as a tab-delimited text file and new localization data (and localization images, etc) for any organism relevant to the data sets currently contained in Organelle DB is welcomed. The data sets in Organelle DB encompass 138 organisms with emphasis on the major model systems: S. cerevisiae, A. thaliana, D. melanogaster, C. elegans, M. musculus, and human proteins as well. In particular, Organelle DB is a central repository of yeast protein localization data, incorporating results from both previous and current (ongoing) large-scale studies of protein localization in Saccharomyces cerevisiae. In addition, we have manually curated several recent subcellular proteomic studies for incorporation in Organelle DB. In total, Organelle DB is a singular resource consolidating our knowledge of the protein composition of eukaryotic organelles and subcellular structures. When available, we have included terms from the Gene Ontologies: the cellular component, molecular function, and biological process fields are discussed more fully in GO. Additionally, when available, we have included fluorescent micrographs (principally of yeast cells) visualizing the described protein localization. Organelle View is a visualization tool for yeast protein localization. It is a visually engaging way for high school and undergraduate students to learn about genetics or for visually-inclined researchers to explore Organelle DB. By revealing the data through a colorful, dimensional model, we believe that different kinds of information will come to light. gene, fly, vertebrate, human, mouse, plant, worm, yeast, protein, k-12, organelle, protein localization, function, subcellular structure, protein complex, sequence, annotation, micrograph, visualization, data analysis service is related to: Gene Ontology
has parent organization: University of Michigan; Ann Arbor; USA
American Cancer Society Research Scholar Grant RSG-06-179-01-MBC;
March of Dimes Basil O'Connor Starter Scholar Research award 5-FY05-1224;
NSF DBI-0543017
PMID:17130152
PMID:15608270
Free, Acknowledgement requested nif-0000-03226 SCR_007837 Organelle DB: A Database of Organelles and Protein Complexes 2026-08-15 11:23:40 7
Protein Mutant Database
 
Resource Report
Resource Website
1+ mentions
Protein Mutant Database (RRID:SCR_007878) PMD database, data repository, storage service resource, data or information resource, service resource It provides information on natural and artificial mutants, including random and site-directed ones, for all proteins except members of the globin and immunoglobulin families. The PMD is based on literature, and each entry in the database corresponds to one article which may describe one, several or a number of protein mutants. Each database entry is identified by a serial number and is defined as either natural or artificial, depending on the type of the mutation. For each entry the following are recorded : JOURNAL, TITLE, CROSS-REFERENCE, PROTEIN, N-TERMINAL, CHANGE, FUNCTION, STRUCTURE, STABILITY, etc. CROSS-REFERENCE indicates the code names of the protein given in other databases such as Protein Identification Resources (2). N-TERMINAL shows the N-terminal sequence of five amino acids which may help to show the unambiguous numbering of th e sequence. CHANGE indicates the position and kind of mutations, such as amino acid substitution, insertion and deletion, denoted with a specific notation. Any functional or structural features (FUNCTION, STRUCTURE, STABILITY,etc) observed in the mutant are described immediately after ''CHANGE''. Relative differences in activity and/or stability, in comparison with the wild-type protein, are indicated with symbols (- -),(-),(=),(+) or (+ +). Complete loss of activity is denoted as (0). Data Submission A data submission system was newly prepared in the PMD. We welcome the authors of articles published in academic journals to submit their own mutant data to the PMD. After checking the contents, we will register the data with a unique accession number. amino acid, artificial, deletion, insertion, mutant, natural, protein, sequence, substitution is related to: PredictSNP
has parent organization: National Institute of Genetics; Shizuoka; Japan
SCR_007878 Protein Mutant Database 2026-08-15 11:23:38 4
Spatio- Spectro- Temporal Receptive Field
 
Resource Report
Resource Website
1+ mentions
Spatio- Spectro- Temporal Receptive Field (RRID:SCR_007995) software resource STRFPak is a Matlab toolbox for estimating the linear and nonlinear stimulus-response mapping function of sensory systems. This mapping function is commonly called the spatio- or spectro-temporal receptive field (STRF). A quantitative estimate of the STRF can be used in subsequent computational modeling studies or to predict future responses of the system. STRFPak implements several general STRF estimation techniques and can be used with any stimuli (including natural scenes and sounds). The theoretical basis for STRF estimation has been known for some time, but estimation software has not been widely available. This project aims to develop appropriate software and make it available to the wider community of sensory neuroscientists. Although STRFPak is based on established methods it incorporates two important innovations. First, STRFPak can be used to characterize a sensory system from its response to arbitrary stimuli including natural signals (e.g., vocalizations, natural scenes). Second, STRFPak incorporates several methods for estimating nonlinear STRFs. STRFPak also includes tutorial examples and documentation. matlab, neuroscience, nonlinear, receptive field, response, sensory, signal, spatio, spectro, stimulus, sensory system, temporal is related to: MATLAB
has parent organization: University of California at Berkeley; Berkeley; USA
nif-0000-07191 SCR_007995 STRFPak 2026-08-15 11:23:39 6
GENIA Project: Mining literature for knowledge in molecular biology
 
Resource Report
Resource Website
1+ mentions
GENIA Project: Mining literature for knowledge in molecular biology (RRID:SCR_007990) GENIA software resource Resources and tools from a project to automatically extract useful information from texts written by scientists to help overcome the problems caused by information overload. The primary annotated resource created is the GENIA corpus, a collection of biomedical literature which consists of multiple layers of annotation, encompassing both syntactic and semantic annotation. The project also created or coordinated the annotation of multiple other corpus resources. Additionally, a rich set of automatic tools are available for various annotation tasks, most trained on various parts of the GENIA corpus annotations. The GENIA corpus was developed to provide a reference material for the development of bio-TM systems. The corpus currently contains 1,999 Medline abstracts which were collected using the three MeSH terms, human, blood cells, and transcription factors. The corpus has been annotated with various levels of linguistic and semantic information. The GENIA corpus includes the following: * POS annotation * Treebank * Coreference Annotation * Term annotation * Event annotation * Relation annotation * Cellular localization * Disease-Gene association * Pathway corpus The GENIA Project initiated the BioNLP Shared Task series and has organized a number of tasks in three different shared task events, many using resources based on GENIA Corpus annotations. Tools include: * XConc suite: a collection of XML-based tools which are integrated to support the corpus development and annotation. annotation, biomedical, computational linguistics, text mining, literature, molecular biology, syntactic annotation, semantic annotation, syntax, semantics, information extraction, blood cell, transcription factor, protein interaction, task is listed by: FORCE11
is related to: MEDLINE
has parent organization: National Centre for Text Mining
has parent organization: University of Tokyo; Tokyo; Japan
Japanese Ministry of Education Culture Sports Science and Technology MEXT ;
Japan Science and Technology Agency
nif-0000-06689 http://www-tsujii.is.s.u-tokyo.ac.jp/GENIA/home/wiki.cgi?page=GENIA+Project SCR_007990 2026-08-15 11:23:40 2
Quartzy
 
Resource Report
Resource Website
1+ mentions
Quartzy (RRID:SCR_007992) community building portal, data or information resource, service resource, portal A computational hosting resource which assissts with lab organization by splitting functions into four modules. “Order requests” is a module where users can view and track order requests. The module “Inventory” allows users to track commercial and lab-made products. “Documents” allows users to organize and share protocols and other documents. “Equipment sign-up” allows users to manage shared equipment. An active help system, video guides, and 1-on-1 demos are available for assistance when setting up. web application, lab management, organization is listed by: Connected Researchers
is related to: Connected Researchers
Free, Available to the research community nif-0000-06695 SCR_007992 Quartzy 2026-08-15 11:23:39 4
Computational Genomics Laboratory
 
Resource Report
Resource Website
1+ mentions
Computational Genomics Laboratory (RRID:SCR_007901) organization portal, data or information resource, laboratory portal, portal Welcome to the computational genomics laboratory''s home page. Main research interests: computational biology, bioinformatics and systems biology applied to the study of the mechanisms underlying gene expression regulation. They also develop bioinformatic software aiming at helping the research community solve some problems. computational, genomics, laboratory, biology, bioinformatics, systems biology, mechanism, gene, expression, regulation, software has parent organization: University of Padua; Padua; Italy University of Padua; Padua; Italy SCR_007901 CompGen 2026-08-15 11:23:32 2
Gene Expression Atlas
 
Resource Report
Resource Website
100+ mentions
Gene Expression Atlas (RRID:SCR_007989) expression atlas, data or information resource, database, atlas Gene Expression Atlas is a semantically enriched database of meta-analysis based summary statistics over a curated subset of ArrayExpress Archive, servicing queries for condition-specific gene expression patterns as well as broader exploratory searches for biologically interesting genes/samples. The EBI Gene Expression Atlas Blog discusses ideas, features and problems of creating a large scale meta-analytical atlas of gene expression from publicly available microarray data. Atlas REST API provides all the results available in the main web application in a pragmatic, easy to use form - simple HTTP GET queries as input and either JSON or XML formats as output. Gene Expression Atlas goals: 1. Provision of a statistically robust framework for integration of gene expression experiment results across different platforms at a meta-analytical level 2. A simple interface for identifying strong differential expression candidate genes in conditions of interest 3. Integration of ontologies for high quality annotation of gene and sample attributes 4. Construction of new gene expression summarized views, with a view to analysis of putative signaling pathway targets, discovery of correlated gene expression patterns and the identification of condition/tissue-specific patterns of gene expression. expression, gene, annotation, assay, molecular neuroanatomy resource, gold standard, bio.tools is listed by: bio.tools
is listed by: Debian
is related to: ArrayExpress
is related to: Experimental Factor Ontology
has parent organization: European Bioinformatics Institute
EMBL ;
European Union FELICS ;
European Union EMERALD
nif-0000-06686, biotools:gxa_expt, r3d100010223, biotools:gene_expression_atlas https://bio.tools/gxa_expt, https://bio.tools/gene_expression_atlas, https://doi.org/10.17616/R3Z888 SCR_007989 2026-08-15 11:23:39 132
Yeast snoRNA Database
 
Resource Report
Resource Website
1+ mentions
Yeast snoRNA Database (RRID:SCR_007980) database, production service resource, data analysis service, data or information resource, service resource, analysis service resource A database of S. cerevisiae H/ACA and C/D box snoRNAs, useful for research on rRNA nucleotide modifications in the ribosome, especially those created by small nucleolar RNA:protein complexes (snoRNPs). The interactive service enables a user to visualize the positions of pseudouridines, 2'-O-methylations, and base methylations in three-dimensional space in the ribosome and also in linear and secondary structure formats of ribosomal RNA. The tools provide additional perspective on where the modifications occur relative to functional regions within the rRNA and relative to other nearby modifications. This package of tools is presented as a major enhancement of an existing but significantly upgraded yeast snoRNA database. The other key features of the enhanced database include details of the base pairing of snoRNAs with target RNAs, genomic organization of the yeast snoRNA genes, and information on corresponding snoRNAs and modifications in other model organisms. saccharomyces cerevisiae is related to: 3D Ribosomal Modification Maps Database
has parent organization: University of Massachusetts Amherst; Massachusetts; USA
U.S. Public Health Service ;
NIGMS GM19351
PMID:17283215 nif-0000-03651 http://www.bio.umass.edu/biochem/rna-sequence/Yeast_snoRNA_Database/snoRNA_DataBase.html SCR_007980 Yeast snoRNA Database at UMass-Amherst 2026-08-15 11:23:39 1
University of Sao Paulo; Sao Paulo; Brazil
 
Resource Report
Resource Website
1+ mentions
University of Sao Paulo; Sao Paulo; Brazil (RRID:SCR_007979) USP university Public university in the Brazilian state of São Paulo. It is the largest Brazilian public university. is parent organization of: USP Molecular Genetics and Bioinformatics Laboratory
is parent organization of: NRDR
is parent organization of: Gene Class Expression
is parent organization of: ReMoto
nlx_149120, Crossref funder ID:501100005639, ISNI:0000 0004 1937 0722, grid.11899.38, Wikidata:Q835960 https://ror.org/036rp1748 SCR_007979 University of Sao Paulo, Universidade de Sao Paulo, Universidade de S�o Paulo, University of S�o Paulo 2026-08-15 11:23:32 1
Variant Effect Predictor
 
Resource Report
Resource Website
1000+ mentions
Variant Effect Predictor (RRID:SCR_007931) VEP production service resource, data analysis service, software resource, service resource, analysis service resource Data analysis service to predict the functional consequences of known and unknown variants. perl, bio.tools is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
has parent organization: Ensembl
biotools:ensembl_variant_effect_predictor https://bio.tools/ensembl_variant_effect_predictor SCR_007931 Ve!P 2026-08-15 11:23:40 2073
Madison Metabolomics Consortium Database
 
Resource Report
Resource Website
50+ mentions
Madison Metabolomics Consortium Database (RRID:SCR_007803) MMCD data or information resource, resource, database A database which supports high-throughput NMR and MS approaches to the identification and quantification of metabolites present in biological samples. MMCD serves as a hub for information on small molecules of biological interest gathered from electronic databases and the scientific literature. Each metabolite entry in the MMCD is supported by information in separate data fields, which provide the chemical formula, names and synonyms, structure, physical and chemical properties, NMR and MS data on pure compounds under defined conditions where available, NMR chemical shifts determined by empirical and/or theoretical approaches, calculated isotopomer masses, information on the presence of the metabolite in different biological species, and links to images, references, and other public databases. The MMCD search engine supports versatile data mining and allows users to make individual or bulk queries on the basis of experimental NMR and/or MS data plus other criteria. database, metabolomics, metabolite, consortium, nmr, mas spectroscopy, FASEB list is listed by: 3DVC
has parent organization: University of Wisconsin-Madison; Wisconsin; USA
NIDDK R21 DK070297;
NCRR P41 RR02301
PMID:18259166 Public nif-0000-03148 SCR_007803 Madison Metabolomics Consortium Database (MMCD) 2026-08-15 11:23:38 63
Human Dermatological Disease Ontology
 
Resource Report
Resource Website
1+ mentions
Human Dermatological Disease Ontology (RRID:SCR_007648) DERMO ontology, data or information resource, controlled vocabulary Ontology of human dermatologic disease obo is listed by: BioPortal Dermatologic disease nlx_157428 SCR_007648 2026-08-15 11:23:39 1
MAMEP - Molecular Anatomy of the Mouse Embryo Project
 
Resource Report
Resource Website
10+ mentions
MAMEP - Molecular Anatomy of the Mouse Embryo Project (RRID:SCR_007768) MAMEP, database, experimental protocol, expression atlas, data or information resource, image collection, atlas, narrative resource Database of gene expression in whole-mount mouse embryos derived from in situ hybridization on mid-gestation mouse embryos. A genome wide screening for genes showing a tissue restricted expression pattern in mid-gestation embryos is performed to identify genes that are likely to play an important role in the regulatory networks controlling pattern formation and organogenesis. The screening provides the basis for imaging the molecular anatomy of the mouse embryo, and for creating a gene resource for a directed functional analysis of developmental processes. The experimental protocol is available. Pattern genes in MAMEP: 1912 Images in MAMEP: 23994 gene expression, molecular neuroanatomy resource, development, in situ hybridization, embryonic mouse, gene, function, blast, organogenesis has parent organization: Max Planck Institute for Molecular Genetics; Berlin; Germany PMID:22936000 nif-0000-03098 SCR_007768 Mamep database 2026-08-15 11:23:32 12
REBASE
 
Resource Report
Resource Website
100+ mentions
REBASE (RRID:SCR_007886) REBASE database, data or information resource Database of information about restriction enzymes and related proteins containing published and unpublished references, recognition and cleavage sites, isoschizomers, commercial availability, methylation sensitivity, crystal, genome, and sequence data. DNA methyltransferases, homing endonucleases, nicking enzymes, specificity subunits and control proteins are also included. Several tools are available including REBsites, BLAST against REBASE, NEBcutter and REBpredictor. Putative DNA methyltransferases and restriction enzymes, as predicted from analysis of genomic sequences, are also listed. REBASE is updated daily and is constantly expanding. Users may submit new enzyme and/or sequence information, recommend references, or send them corrections to existing data. The contents of REBASE may be browsed from the web and selected compilations can be downloaded by ftp (ftp.neb.com). Additionally, monthly updates can be requested via email., endonuclease, enzyme, genome, archaeal, bacterial, cleavage, crystal, dna, individual protein family databases, isochizomer, methylation, methyltransferase, modification, protein, recognition, restriction, restriction enzyme, sensitivity, sequence, site, methylase, cleavage site, restriction-modification, blast, FASEB list has parent organization: New England Biolabs
works with: Webcutter
New England Biolabs Inc ;
NLM LM04971
PMID:19846593
PMID:17202163
r3d100012171, nif-0000-03391 http://rebase.neb.com, https://doi.org/10.17616/R3J930 http://www.neb.com/rebase SCR_007886 The Restriction Enzyme Database, Restriction Enzyme Database 2026-08-15 11:23:32 261
University of Pittsburgh Alzheimer Disease Research Center
 
Resource Report
Resource Website
100+ mentions
University of Pittsburgh Alzheimer Disease Research Center (RRID:SCR_008084) ADRC data or information resource, portal, disease-related portal, topical portal A research center associated with the University of Pittsburgh that specializes in the diagnosis of Alzheimer's disease and related disorders. The overall objective of the ADRC is to study the pathophysiology of Alzheimer's disease, with the aim of improving the reliability of diagnosis of Alzheimer's and developing effective treatment strategies. Current research foci emphasize neuropsychiatry and neuropsychology, molecular genetics and epidemiology, basic neuroscience, and structural and functional imaging that aid in the diagnosis and treatment of Alzheimer's disease. Specific services at the ADRC include: comprehensive diagnostic evaluation of patients with suspected Alzheimer's disease and other forms of dementia; evaluation of memory, language, judgment, and other cognitive abilities; and education and counseling for patients and families. african american, alzheimer's disease, assessment, clinical, cognitive, dementia, diagnosis, diagnostic evaluation, human, medical, mild cognitive impairment, neurological, pathophysiology, psychiatric has parent organization: University of Pittsburgh; Pennsylvania; USA Alzheimer's disease, Mild Cognitive Impairment, Dementia, Aging NIA Public nif-0000-10750 SCR_008084 University of Pittsburgh Alzheimer's Disease Research Center 2026-08-15 11:23:42 494
HHsim: Graphical Hodgkin-Huxley Simulator
 
Resource Report
Resource Website
1+ mentions
HHsim: Graphical Hodgkin-Huxley Simulator (RRID:SCR_008087) software application, training resource, simulation software, software resource A graphical simulation of a section of excitable neuronal membrane using the Hodgkin-Huxley equations. It provides full access to the Hodgkin-Huxley parameters, membrane parameters, stimulus parameters, and ion concentrations. In contrast with NEURON or GENESIS, which are vastly more sophisticated research tools, HHsim is simple educational software designed specifically for graduate or undergraduate neurophysiology courses. The user interface can be mastered in a couple of minutes and provides many ways for the student to experiment. Also included are sample exercises that use the simulator. HHsim is available as a Windows, Mac, or Unix executable file that does not require a Matlab license. Source code is included. It is also available in source-only form if you have Matlab R2007a or later. The latest release of HHsim is version 3.1, released February 16, 2008. hodgkin-huxley, ion concentrations, membrane, neuronal membrane, neurophysiology, parameters, stimulus, educational resource has parent organization: Carnegie Mellon University; Pennsylvania; USA Free software distributed under the GNU General Public License. nif-0000-10760 SCR_008087 HHsim 2026-08-15 11:23:40 1
Allen Human Brain Atlas: BrainSpan (Atlas of the Developing Brain)
 
Resource Report
Resource Website
100+ mentions
Allen Human Brain Atlas: BrainSpan (Atlas of the Developing Brain) (RRID:SCR_008083) BrainSpan expression atlas, data or information resource, reference atlas, atlas Atlas of developing human brain for studying transcriptional mechanisms involved in human brain development. Consists of RNA sequencing and exon microarray data profiling up to sixteen cortical and subcortical structures across full course of human brain development, high resolution neuroanatomical transcriptional profiles of about 300 distinct structures spanning entire brain for four midgestional prenatal specimens, in situ hybridization image data covering selected genes and brain regions in developing and adult human brain, reference atlas in full color with high resolution anatomic reference atlases of prenatal (two stages) and adult human brain along with supporting histology, magnetic resonance imaging (MRI) and diffusion weighted imaging (DWI) data. anatomic, gene expression, molecular neuroanatomy, in situ hybridization, human, medial prefrontal cortex, primary visual cortex, hippocampus, amygdala, ventral striatum, postnatal, development, brain development, transcription, brain, rna sequencing, exon microarray, developmental stage, male, female, mrna transcript, developing human, adult human, fetal brain, fetus, histology, transcriptome, magnetic resonance imaging, diffusion tensor imaging, annotation, neuroanatomy, prenatal, development, fiber tract, microarray, mri, dti, methylation, microrna, mrf is used by: BICCN
is related to: NIH Blueprint NHP Atlas
is related to: Allen Developing Mouse Brain Atlas
is related to: Developmental Human Brain Atlas Ontology (DHBA)
is related to: Developing Human Brain Atlas version 2 (DHBAv2)
has parent organization: Allen Institute for Brain Science
is parent organization of: BrainSpan
is parent organization of: BrainSpan
Neurodevelopmental disorder, Neuropsychiatric disease, Schizophrenia, Epilepsy, Parkinson's disease, Alzheimer's disease, Neurological disease, Autism NIMH RC2 MH089921;
NIMH RC2 MH090047;
NIMH RC2 MH089929
Free, Freely available nif-0000-10626 http://www.developinghumanbrain.org/ SCR_008083 BrainSpan - Atlas of the Developing Human Brain, BrainSpan: Atlas of the Developing Human Brain, NIMH Transcriptional Atlas of Human Brain Development 2026-08-15 11:23:40 465
MathML
 
Resource Report
Resource Website
1+ mentions
MathML (RRID:SCR_008078) MathML markup language, standard specification, interchange format, data or information resource, narrative resource A low-level specification for describing mathematics as a basis for machine to machine communication, developed by the W3C. mathematics, mark-up language, xml is listed by: 3DVC nif-0000-10548 SCR_008078 W3C MathML 2026-08-15 11:23:40 6
CellML Model Repository
 
Resource Report
Resource Website
1+ mentions
CellML Model Repository (RRID:SCR_008113) CellML Repository data repository, storage service resource, software repository, software resource, service resource Repository of biological models created using CellML, a free, open-source, eXtensible markup language based standard for defining mathematical models of cellular function. Models may be browsed by category, which include: Calcium Dynamics, Cardiovascular Circulation, Cell Cycle, Cell Migration, Circadian Rhythms, Electrophysiology, Endocrine, Excitation-Contraction Coupling, Gene Regulation, Hepatology, Immunology, Ion Transport, Mechanical Constitutive Laws, Metabolism, Myofilament Mechanics, Neurobiology, pH Regulation, PKPD, Signal Transduction, Synthetic Biology. The community can contribute their models to this resource. cell function, cell model, model, cell, calcium dynamics, cardiovascularc circulation, cell cycle, cell migration, circadian rhythm, electrophysiology, endocrine, excitation-contraction coupling, gene regulation, hepatology, immunology, ion transport, mechanical constitutive law, metabolism, myofilament mechanics, neurobiology, ph regulation, pkpd, signal transduction, synthetic biology, image, exposure is used by: NIF Data Federation
is listed by: 3DVC
is listed by: Integrated Models
is related to: Integrated Manually Extracted Annotation
has parent organization: CellML
Wellcome Trust ;
Royal Society of New Zealand ;
Maurice Wilkins Centre for Molecular Biodiscovery
PMID:21216774
PMID:18658182
PMID:17947072
PMID:19162720
PMID:19380315
The community can contribute to this resource nif-0000-20828 SCR_008113 2026-08-15 11:23:40 6

Can't find your Tool?

We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.

Can't find the RRID you're searching for? X
X
  1. RRID Portal Resources

    Welcome to the RRID Resources search. From here you can search through a compilation of resources used by RRID and see how data is organized within our community.

  2. Navigation

    You are currently on the Community Resources tab looking through categories and sources that RRID has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.

  3. Logging in and Registering

    If you have an account on RRID then you can log in from here to get additional features in RRID such as Collections, Saved Searches, and managing Resources.

  4. Searching

    Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:

    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into RRID you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.