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| Resource Name | Proper Citation | Abbreviations | Resource Type |
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Project BCI - EEG motor activity data set Resource Report Resource Website 1+ mentions |
Project BCI - EEG motor activity data set (RRID:SCR_001585) | Project BCI - EEG motor activity data set | data or information resource, data set | EEG motor activity data sets used for Brain Computer Interface research project in Matlab MAT format. * Dataset 1 - 1D motion: This subject is a 21 year old, right handed male with no known medical conditions. The EEG consists of actual random movements of left and right hand recorded with eyes closed. Each row represents one electrode. The order of the electrodes is FP1 FP2 F3 F4 C3 C4 P3 P4 O1 O2 F7 F8 T3 T4 T5 T6 FZ CZ PZ. The recording was done at 500Hz using Neurofax EEG System which uses a daisy chain montage. The data was exported with a common reference using Eemagine EEG. AC Lines in this country work at 50 Hz. This info is also included in the MAT file. * Dataset 2 - 2D motion: This subject is a 21 year old, right handed male with no known medical conditions. The EEG consists of actual random movements of left and right hand recorded with eyes closed. Each row represents one electrode. The order of the electrodes is FP1 FP2 F3 F4 C3 C4 P3 P4 O1 O2 F7 F8 T3 T4 T5 T6 FZ CZ PZ. The recording was done at 500Hz using Neurofax EEG System which uses a daisy chain montage. The data was exported with a common reference using Eemagine EEG. AC Lines in this country work at 50 Hz. This data consists of the following movements # Three trials left hand forward movement # Three trials left hand backward movement # Three trials left hand forward movement # Three trials left hand forward movement # 1 trial imagined left hand forward movement # 1 trial imagined left hand backward movement # 1 trial imagined right hand forward movement # 1 trial imagined right hand backward movement # 1 trial left leg movement # 1 trial right leg movement | eeg, early adult human, male, right handed, motor, leg, movement, imagery, brain computer interface, eyes closed, motion | has parent organization: National University of Sciences and Technology; Islamabad; Pakistan | Normal | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_153822 | SCR_001585 | 2026-08-03 09:31:24 | 1 | |||||||
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Open Rotterdam Glaucoma Imaging Data Sets Resource Report Resource Website |
Open Rotterdam Glaucoma Imaging Data Sets (RRID:SCR_003540) | ORGIDS | data or information resource, data set | Data sets resulting from glaucoma research including visual fields, various imaging modalities and other data from both glaucomatous and normal subjects. The Longitudinal Glaucomatous Visual Fields data set contains IOP (Intraocular pressure) measurements and 24-2 Full Threshold visual fields obtained with a Humphrey Field Analyzer (Zeiss). Data of both eyes of 139 patients over a mean period of over 9 years is included, with on average more than 17 fields per eye. Local threshold and total deviation values are included. | visual field, eye, clinical, longitudinal, ophthalmology, adult human | has parent organization: Rotterdam Ophthalmic Institute; Rotterdam; Netherlands | Glaucoma, Normal | PMID:24644052 PMID:24030462 |
Free, Acknowledgement requested, License agreement, Non-commercial | nlx_157652 | SCR_003540 | 2026-08-03 09:32:16 | 0 | ||||||
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MRI Dataset for Hippocampus Segmentation Resource Report Resource Website |
MRI Dataset for Hippocampus Segmentation (RRID:SCR_009597) | Hippocampus Segmentation Dataset | data or information resource, data set | This dataset contains T1-weighted MR images of 50 subjects, 40 of whom are patients with temporal lobe epilepsy and 10 are nonepileptic subjects. Hippocampus labels are provided for 25 subjects for training. The users may submit their segmentation outcomes for the remaining 25 testing images to get a table of segmentation metrics. | hfh hippocampus segmentation, magnetic resonance, hippocampus, image collection, mri, segmentation | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Epilepsy, Normal | PMID:21286946 | Other/Commercial license License | nlx_155797 | http://www.nitrc.org/projects/hippseg_2011 | SCR_009597 | 2026-08-03 09:34:08 | 0 | |||||
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Hippocampome.org Resource Report Resource Website 10+ mentions |
Hippocampome.org (RRID:SCR_009023) | Hippocampome | data or information resource, database | A curated knowledge base of the circuitry of the hippocampus of normal adult, or adolescent, rodents at the mesoscopic level of neuronal types. Knowledge concerning dentate gyrus, CA3, CA2, CA1, subiculum, and entorhinal cortex is distilled from published evidence and is continuously updated as new information becomes available. Each reported neuronal property is documented with a pointer to, and excerpt from, relevant published evidence, such as citation quotes or illustrations. Please note: This is an alpha-testing site. The content is still being vetted for accuracy and has not yet undergone peer-review. As such, it may contain inaccuracies and should not (yet) be trusted as a scholarly resource. The content does not yet appear uniformly across all combinations of browsers and screen resolutions. | interneuron, classification, neuroinformatics, network, hippocampus, neuron, property, morphology, molecular marker, electrophysiology, adult, adolescent, dentate gyrus, ca3, ca2, ca1, subiculum, entorhinal cortex, bio.tools |
is used by: BICCN is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: Debian is listed by: bio.tools has parent organization: George Mason University; Virginia; USA |
Normal | Air Force Office of Scientific Research ; Office of Naval Research MURI N00014-10-1-0198; NINDS R01NS39600; NINDS R21NS58816 |
Except otherwise noted, Creative Commons Attribution-ShareAlike License | nlx_152892, biotools:Hippocampome.org | http://www.nitrc.org/projects/hippocampome, https://bio.tools/Hippocampome.org | SCR_009023 | Hippocampome Portal | 2026-08-03 09:34:11 | 32 | ||||
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3D MRI Atlas of Mouse Development Resource Report Resource Website 1+ mentions |
3D MRI Atlas of Mouse Development (RRID:SCR_008090) | MRI Atlas of Mouse Development, | data or information resource, atlas |
THIS RESOURCE IS NO LONGER IN SERVICE, documented May 10, 2017. A pilot effort that has developed a centralized, web-based biospecimen locator that presents biospecimens collected and stored at participating Arizona hospitals and biospecimen banks, which are available for acquisition and use by researchers. Researchers may use this site to browse, search and request biospecimens to use in qualified studies. The development of the ABL was guided by the Arizona Biospecimen Consortium (ABC), a consortium of hospitals and medical centers in the Phoenix area, and is now being piloted by this Consortium under the direction of ABRC. You may browse by type (cells, fluid, molecular, tissue) or disease. Common data elements decided by the ABC Standards Committee, based on data elements on the National Cancer Institute''s (NCI''s) Common Biorepository Model (CBM), are displayed. These describe the minimum set of data elements that the NCI determined were most important for a researcher to see about a biospecimen. The ABL currently does not display information on whether or not clinical data is available to accompany the biospecimens. However, a requester has the ability to solicit clinical data in the request. Once a request is approved, the biospecimen provider will contact the requester to discuss the request (and the requester''s questions) before finalizing the invoice and shipment. The ABL is available to the public to browse. In order to request biospecimens from the ABL, the researcher will be required to submit the requested required information. Upon submission of the information, shipment of the requested biospecimen(s) will be dependent on the scientific and institutional review approval. Account required. Registration is open to everyone.. Documented on October, 01, 2019. 3D digital atlas of normal mouse development constructed from magnetic resonance image data. The download is a zipped file containing the six atlases Theiler Stages (ts) 13, 21,23, 24, 25 and 26 and MRI data for an unlabeled ts19 embryo. To view the atlases, download and install MBAT from: http://mbat.loni.ucla.edu Specimens were prepared in aqueous, isotonic solutions to avoid tissue shrinkage. Limited specimen handling minimized physical perturbation of the embryos to ensure accurate geometric representations of developing mouse anatomy. Currently, the atlas contains orthogonal sections through MRI volumes, three stages of embryos that have annotated anatomy, photographs of several stages of development, lineage trees for annotated embryos and a gallery of images and movies derived from the annotations. Anatomical annotations can be viewed by selecting a transverse section and selecting a pixel on the displayed slice. |
embryo, embryogenesis, development, magnetic resonance imaging, mouse, developing, c57bl/6, development, anatomy, embryonic mouse | is related to: Mouse BIRN Atlasing Toolkit | Normal | Human Brain Project ; Biomedical Informatics Research Network ; Beckman Institute at Caltech ; NCRR ; NIBIB |
PMID:10091864 | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-10989 | SCR_008090 | Caltech micro MRI Atlas of Mouse Development, microMRI Atlas of Mouse Development, Caltech MRI Atlas of Mouse Development, micro MRI Atlas of Mouse Development | 2026-08-03 09:33:39 | 1 |
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